RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 PCED1AQ9H1Q7 454 aa4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 FAM83DQ9H4H8 585 aa4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 TRMT13Q9NUP7 481 aaKnown RBP4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 TAGLN3Q9UI15 199 aa4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 CDC23Q9UJX2 597 aa4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 CYR61O00622 381 aa4.83□□□□□ -1.64
TOPBP1-204ENST00000505804 IL6RP08887 468 aaPredicted RBP4.83□□□□□ -1.64
TOPBP1-204ENST00000505804 ELFN1P0C7U0 828 aa4.83□□□□□ -1.64
TOPBP1-204ENST00000505804 SETSIPP0DME0 302 aa4.83□□□□□ -1.64
TOPBP1-204ENST00000505804 EEF1GP26641 437 aaKnown RBP4.83□□□□□ -1.64
TOPBP1-204ENST00000505804 UQCRC1P31930 480 aa4.83□□□□□ -1.64
TOPBP1-204ENST00000505804 ATICP31939 592 aa4.83□□□□□ -1.64
TOPBP1-204ENST00000505804 HSPA7P48741 367 aa4.83□□□□□ -1.64
TOPBP1-204ENST00000505804 BCAT1P54687 386 aa4.83□□□□□ -1.64
TOPBP1-204ENST00000505804 BTKQ06187 659 aa4.83□□□□□ -1.64
TOPBP1-204ENST00000505804 MORC3Q14149 939 aa4.83□□□□□ -1.64
TOPBP1-204ENST00000505804 ZNF169Q14929 603 aaPredicted RBP4.83□□□□□ -1.64
TOPBP1-204ENST00000505804 MPEG1Q2M385 716 aa4.83□□□□□ -1.64
TOPBP1-204ENST00000505804 DGKKQ5KSL6 1271 aa4.83□□□□□ -1.64
TOPBP1-204ENST00000505804 ZNF618Q5T7W0 954 aa4.83□□□□□ -1.64
TOPBP1-204ENST00000505804 MANEALQ5VSG8 457 aa4.83□□□□□ -1.64
TOPBP1-204ENST00000505804 C1orf228Q6PIY5 440 aa4.83□□□□□ -1.64
TOPBP1-204ENST00000505804 CRTC1Q6UUV9 634 aa4.83□□□□□ -1.64
TOPBP1-204ENST00000505804 MRGPRGQ86SM5 289 aa4.83□□□□□ -1.64
TOPBP1-204ENST00000505804 PEG10Q86TG7 708 aaKnown RBP4.83□□□□□ -1.64
TOPBP1-204ENST00000505804 SPICE1Q8N0Z3 855 aa4.83□□□□□ -1.64
TOPBP1-204ENST00000505804 XAGE5Q8WWM1 108 aa4.83□□□□□ -1.64
TOPBP1-204ENST00000505804 PBKQ96KB5 322 aa4.83□□□□□ -1.64
TOPBP1-204ENST00000505804 HEYLQ9NQ87 328 aaPredicted RBP4.83□□□□□ -1.64
TOPBP1-204ENST00000505804 FOXJ2Q9P0K8 574 aa4.83□□□□□ -1.64
TOPBP1-204ENST00000505804 ST3GAL5Q9UNP4 418 aa4.83□□□□□ -1.64
TOPBP1-204ENST00000505804 HPSEQ9Y251 543 aa4.83□□□□□ -1.64
TOPBP1-204ENST00000505804 POLR2AP24928 1970 aaKnown RBP4.82□□□□□ -1.64
TOPBP1-204ENST00000505804 A0A087X1B8 175 aa4.82□□□□□ -1.64
TOPBP1-204ENST00000505804 AGPSO00116 658 aa4.82□□□□□ -1.64
TOPBP1-204ENST00000505804 SLPIP03973 132 aa4.82□□□□□ -1.64
TOPBP1-204ENST00000505804 PROZP22891 400 aa4.82□□□□□ -1.64
TOPBP1-204ENST00000505804 GABRB3P28472 473 aa4.82□□□□□ -1.64
TOPBP1-204ENST00000505804 NTSR1P30989 418 aa4.82□□□□□ -1.64
TOPBP1-204ENST00000505804 PPM1AP35813 382 aa4.82□□□□□ -1.64
TOPBP1-204ENST00000505804 GRIA3P42263 894 aa4.82□□□□□ -1.64
TOPBP1-204ENST00000505804 ALDH9A1P49189 494 aa4.82□□□□□ -1.64
TOPBP1-204ENST00000505804 GATMP50440 423 aa4.82□□□□□ -1.64
TOPBP1-204ENST00000505804 PGDP52209 483 aa4.82□□□□□ -1.64
TOPBP1-204ENST00000505804 COPAP53621 1224 aa4.82□□□□□ -1.64
TOPBP1-204ENST00000505804 PDE1AP54750 535 aa4.82□□□□□ -1.64
TOPBP1-204ENST00000505804 SIM1P81133 766 aaPredicted RBP4.82□□□□□ -1.64
TOPBP1-204ENST00000505804 DPTQ07507 201 aa4.82□□□□□ -1.64
TOPBP1-204ENST00000505804 KIAA0408Q6ZU52 694 aa4.82□□□□□ -1.64
TOPBP1-204ENST00000505804 USP49Q70CQ1 688 aa4.82□□□□□ -1.64
TOPBP1-204ENST00000505804 CAND1Q86VP6 1230 aaKnown RBP4.82□□□□□ -1.64
TOPBP1-204ENST00000505804 SYTL1Q8IYJ3 562 aa4.82□□□□□ -1.64
TOPBP1-204ENST00000505804 GLIS1Q8NBF1 620 aa4.82□□□□□ -1.64
TOPBP1-204ENST00000505804 VPS37AQ8NEZ2 397 aa4.82□□□□□ -1.64
TOPBP1-204ENST00000505804 PDLIM2Q96JY6 352 aa4.82□□□□□ -1.64
TOPBP1-204ENST00000505804 GDF15Q99988 308 aa4.82□□□□□ -1.64
TOPBP1-204ENST00000505804 ARFGAP3Q9NP61 516 aa4.82□□□□□ -1.64
TOPBP1-204ENST00000505804 PLCB1Q9NQ66 1216 aa4.82□□□□□ -1.64
TOPBP1-204ENST00000505804 ARHGEF3Q9NR81 526 aa4.82□□□□□ -1.64
TOPBP1-204ENST00000505804 USP22Q9UPT9 525 aa4.82□□□□□ -1.64
TOPBP1-204ENST00000505804 ABHD14A-ACY1A0A1B0GW23 586 aa4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 FAM234BA2RU67 622 aa4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 LINC00473A8K010 186 aa4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 MGST3O14880 152 aa4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 KCNQ3O43525 872 aa4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 AKAP8O43823 692 aaKnown RBP4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 PLA2G6O60733 806 aa4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 COQ9O75208 318 aa4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 LDHAP00338 332 aaKnown RBP4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 LMNAP02545 664 aaKnown RBP4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 JUPP14923 745 aa4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 EPHA3P29320 983 aa4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 CXCR5P32302 372 aa4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 IL6STP40189 918 aaPredicted RBP4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 RARRES1P49788 294 aa4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 PLAC9Q5JTB6 97 aa4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 C10orf62Q5T681 223 aaPredicted RBP4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 TEDDM1Q5T9Z0 273 aa4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 RAP1GAP2Q684P5 730 aa4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 OLFML1Q6UWY5 402 aa4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 FANCBQ8NB91 859 aa4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 SOCS4Q8WXH5 440 aa4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 SLC9A6Q92581 669 aa4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 C18orf8Q96DM3 657 aa4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 SNX27Q96L92 541 aa4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 FAM227BQ96M60 508 aa4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 HIST1H2AAQ96QV6 131 aa4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 DPCDQ9BVM2 203 aaPredicted RBP4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 EIF2AQ9BY44 585 aaKnown RBP4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 PCDHAC1Q9H158 963 aa4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 TMPRSS5Q9H3S3 457 aa4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 SERTAD4Q9NUC0 356 aa4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 DNAJB11Q9UBS4 358 aa4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 CCNL1Q9UK58 526 aaPredicted RBP4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 ZMYND8Q9ULU4 1186 aaPredicted RBP4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 DRG1Q9Y295 367 aaKnown RBP4.81□□□□□ -1.64
TOPBP1-204ENST00000505804 CCDC151A5D8V7 595 aa4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 URI1O94763 535 aaPredicted RBP4.8□□□□□ -1.64
TOPBP1-204ENST00000505804 RHOBTB3O94955 611 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms