RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 TM7SF3Q9NS93 570 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 ZDHHC3Q9NYG2 299 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 VPS9D1Q9Y2B5 631 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 SPO11Q9Y5K1 396 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 IGSF1Q8N6C5 1336 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 FANCIQ9NVI1 1328 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 TSPAN1O60635 241 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 ADH1AP07327 375 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 ANXA6P08133 673 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 EDNRBP24530 442 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 TNFRSF8P28908 595 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 CTSOP43234 321 aaPredicted RBP7.55□□□□□ -1.2
CDH9-202ENST00000505020 POLGP54098 1239 aaPredicted RBP7.55□□□□□ -1.2
CDH9-202ENST00000505020 PNLIPRP1P54315 467 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 ZNF445P59923 1031 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 HTRA4P83105 476 aaPredicted RBP7.55□□□□□ -1.2
CDH9-202ENST00000505020 SMAD3P84022 425 aaKnown RBP7.55□□□□□ -1.2
CDH9-202ENST00000505020 SMUG1Q53HV7 270 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 TMEM201Q5SNT2 666 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 NEK5Q6P3R8 708 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 FBXO38Q6PIJ6 1188 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 ATF7IPQ6VMQ6 1270 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 HID1Q8IV36 788 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 CCDC105Q8IYK2 499 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 PHACTR4Q8IZ21 702 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 CARFQ8N187 725 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 CELF5Q8N6W0 485 aaKnown RBP7.55□□□□□ -1.2
CDH9-202ENST00000505020 USHBP1Q8N6Y0 703 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 C7orf57Q8NEG2 295 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 TNPO1Q92973 898 aaKnown RBP7.55□□□□□ -1.2
CDH9-202ENST00000505020 MR1Q95460 341 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 C19orf60Q96EN9 201 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 ABHD17AQ96GS6 310 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 ABHD1Q96SE0 405 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 STRA6Q9BX79 667 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 TEX12Q9BXU0 123 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 TTC12Q9H892 705 aaPredicted RBP7.55□□□□□ -1.2
CDH9-202ENST00000505020 IL21Q9HBE4 155 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 MBD1Q9UIS9 605 aaPredicted RBP7.55□□□□□ -1.2
CDH9-202ENST00000505020 APPL1Q9UKG1 709 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 TMPRSS11EQ9UL52 423 aa7.55□□□□□ -1.2
CDH9-202ENST00000505020 MYPNQ86TC9 1320 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 LOC100653049A0A140TA62 436 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 DNM1LO00429 736 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 PSMD14O00487 310 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 IDH1O75874 414 aaKnown RBP7.54□□□□□ -1.2
CDH9-202ENST00000505020 KRT34O76011 436 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 PRAMEF12O95522 483 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 PSMB10P40306 273 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 PHKA2P46019 1235 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 MAP2K6P52564 334 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 CASP9P55211 416 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 ACTR2P61160 394 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 ST5P78524 1137 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 PPATQ06203 517 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.54□□□□□ -1.2
CDH9-202ENST00000505020 DMPKQ09013 629 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 TRA2AQ13595 282 aaKnown RBP eCLIP7.54□□□□□ -1.2
CDH9-202ENST00000505020 TNFAIP1Q13829 316 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 SPIDRQ14159 915 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 PDIA5Q14554 519 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 IQCB1Q15051 598 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 KCTD21Q4G0X4 260 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 RRAGBQ5VZM2 374 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 ADALQ6DHV7 355 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 OGFOD3Q6PK18 319 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 ATG14Q6ZNE5 492 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 ZNF600Q6ZNG1 722 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 PDZD3Q86UT5 571 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 MICU3Q86XE3 530 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 RFX6Q8HWS3 928 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 EFCAB13Q8IY85 973 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 TTC5Q8N0Z6 440 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 SFRP1Q8N474 314 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 ZNF610Q8N9Z0 462 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 KCNH5Q8NCM2 988 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 PCDH19Q8TAB3 1148 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 ZNF671Q8TAW3 534 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 CSGALNACT1Q8TDX6 532 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 NCSTNQ92542 709 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 SUCLG2Q96I99 432 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 ACE2Q9BYF1 805 aaPredicted RBP7.54□□□□□ -1.2
CDH9-202ENST00000505020 KLHL4Q9C0H6 718 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 CLEC4MQ9H2X3 399 aaPredicted RBP7.54□□□□□ -1.2
CDH9-202ENST00000505020 ABHD16BQ9H3Z7 469 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 DENND2DQ9H6A0 471 aaPredicted RBP7.54□□□□□ -1.2
CDH9-202ENST00000505020 HAUS4Q9H6D7 363 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 SLC35C2Q9NQQ7 365 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 SOHLH2Q9NX45 425 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 CPNE7Q9UBL6 633 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 LIPT1Q9Y234 373 aa7.54□□□□□ -1.2
CDH9-202ENST00000505020 RPH3AQ9Y2J0 694 aaPredicted RBP7.54□□□□□ -1.2
CDH9-202ENST00000505020 FCF1Q9Y324 198 aaKnown RBP7.54□□□□□ -1.2
CDH9-202ENST00000505020 GPC6Q9Y625 555 aaPredicted RBP7.54□□□□□ -1.2
CDH9-202ENST00000505020 SYCE3A1L190 88 aa7.53□□□□□ -1.2
CDH9-202ENST00000505020 CCDC154A6NI56 674 aa7.53□□□□□ -1.2
CDH9-202ENST00000505020 MYO1FO00160 1098 aa7.53□□□□□ -1.2
CDH9-202ENST00000505020 PPEF2O14830 753 aa7.53□□□□□ -1.2
CDH9-202ENST00000505020 WDR46O15213 610 aaKnown RBP7.53□□□□□ -1.2
CDH9-202ENST00000505020 NVLO15381 856 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms