RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 KLRC2P26717 231 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 ADORA2BP29275 332 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 STAT1P42224 750 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 MRE11P49959 708 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 ARPP19P56211 112 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 GSCP56915 257 aaPredicted RBP5.23□□□□□ -1.57
LMNB1-208ENST00000504788 YWHAEP62258 255 aaKnown RBP5.23□□□□□ -1.57
LMNB1-208ENST00000504788 TSPY1Q01534 308 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 CENPCQ03188 943 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 MAPRE1Q15691 268 aaKnown RBP5.23□□□□□ -1.57
LMNB1-208ENST00000504788 PPP1R15BQ5SWA1 713 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 SNX30Q5VWJ9 437 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 TRNP1Q6NT89 227 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 ANKRD54Q6NXT1 300 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 TMC6Q7Z403 805 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 BNIPLQ7Z465 357 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 SCD5Q86SK9 330 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 GPR149Q86SP6 731 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 DCP1BQ8IZD4 617 aaKnown RBP5.23□□□□□ -1.57
LMNB1-208ENST00000504788 SCML4Q8N228 414 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 MICALL1Q8N3F8 863 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.23□□□□□ -1.57
LMNB1-208ENST00000504788 UBA3Q8TBC4 463 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 GPR152Q8TDT2 470 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 MICAL1Q8TDZ2 1067 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 STK32AQ8WU08 396 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 SECISBP2LQ93073 1101 aaKnown RBP5.23□□□□□ -1.57
LMNB1-208ENST00000504788 PSMG2Q969U7 264 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 HEXIM2Q96MH2 286 aaKnown RBP5.23□□□□□ -1.57
LMNB1-208ENST00000504788 PRKD2Q9BZL6 878 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 NMUR1Q9HB89 426 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 CYP4F11Q9HBI6 524 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 PRDM6Q9NQX0 595 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 ABI2Q9NYB9 513 aaPredicted RBP5.23□□□□□ -1.57
LMNB1-208ENST00000504788 LUC7L2Q9Y383 392 aaKnown RBP5.23□□□□□ -1.57
LMNB1-208ENST00000504788 REXO2Q9Y3B8 237 aaKnown RBP5.23□□□□□ -1.57
LMNB1-208ENST00000504788 MYO10Q9HD67 2058 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 SSU72P8A0A1W2PR75 194 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 TULP1O00294 542 aaPredicted RBP5.22□□□□□ -1.57
LMNB1-208ENST00000504788 AP1G2O75843 785 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 ERBB2P04626 1255 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 HNRNPA1P09651 372 aaKnown RBP eCLIP5.22□□□□□ -1.57
LMNB1-208ENST00000504788 SETSIPP0DME0 302 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 KRT5P13647 590 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 FOSL2P15408 326 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 FERP16591 822 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 HOXB8P17481 243 aaPredicted RBP5.22□□□□□ -1.57
LMNB1-208ENST00000504788 TUFMP49411 452 aaKnown RBP5.22□□□□□ -1.57
LMNB1-208ENST00000504788 SLC5A3P53794 718 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 BCAT1P54687 386 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 MAP3K7CLP57077 242 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 CCZ1BP86790 482 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 CCZ1P86791 482 aaPredicted RBP5.22□□□□□ -1.57
LMNB1-208ENST00000504788 CYP27A1Q02318 531 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 BST2Q10589 180 aaKnown RBP5.22□□□□□ -1.57
LMNB1-208ENST00000504788 TWF1Q12792 350 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 PDCLQ13371 301 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 TRIM14Q14142 442 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 STILQ15468 1287 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 GOLGA7BQ2TAP0 167 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 OTUD1Q5VV17 481 aaPredicted RBP5.22□□□□□ -1.57
LMNB1-208ENST00000504788 LLGL2Q6P1M3 1020 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 CYP26C1Q6V0L0 522 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 C4orf50Q6ZRC1 276 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 MON1BQ7L1V2 547 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 CCDC186Q7Z3E2 898 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 DNAJB7Q7Z6W7 309 aaPredicted RBP5.22□□□□□ -1.57
LMNB1-208ENST00000504788 DNAAF5Q86Y56 855 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 SPATA2LQ8IUW3 424 aaPredicted RBP5.22□□□□□ -1.57
LMNB1-208ENST00000504788 ZNF276Q8N554 614 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 C1orf131Q8NDD1 294 aaKnown RBP5.22□□□□□ -1.57
LMNB1-208ENST00000504788 OR8K1Q8NGG5 319 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 RIN3Q8TB24 985 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 CLEC4CQ8WTT0 213 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 CPLX3Q8WVH0 158 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 CASP10Q92851 521 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 SPAG5Q96R06 1193 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 GAS2L1Q99501 681 aaPredicted RBP5.22□□□□□ -1.57
LMNB1-208ENST00000504788 AGPAT1Q99943 283 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 NUCKS1Q9H1E3 243 aaKnown RBP5.22□□□□□ -1.57
LMNB1-208ENST00000504788 ISCUQ9H1K1 167 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 ADAM7Q9H2U9 754 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 UBE2ZQ9H832 354 aaPredicted RBP5.22□□□□□ -1.57
LMNB1-208ENST00000504788 DMAP1Q9NPF5 467 aaPredicted RBP5.22□□□□□ -1.57
LMNB1-208ENST00000504788 CYLDQ9NQC7 956 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 CALCOCO1Q9P1Z2 691 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 IMPACTQ9P2X3 320 aa5.22□□□□□ -1.57
LMNB1-208ENST00000504788 R3HCC1Q9Y3T6 440 aaKnown RBP5.22□□□□□ -1.57
LMNB1-208ENST00000504788 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.22□□□□□ -1.578e-7■■■□□ 17.8
LMNB1-208ENST00000504788 BDP1A6H8Y1 2624 aa5.21□□□□□ -1.58
LMNB1-208ENST00000504788 CCDC195A0A1B0GUA6 201 aa5.21□□□□□ -1.58
LMNB1-208ENST00000504788 SLC38A8A6NNN8 435 aa5.21□□□□□ -1.58
LMNB1-208ENST00000504788 YJEFN3A6XGL0 299 aa5.21□□□□□ -1.58
LMNB1-208ENST00000504788 AKR1B15C9JRZ8 316 aaPredicted RBP5.21□□□□□ -1.58
LMNB1-208ENST00000504788 E5RJQ4 531 aa5.21□□□□□ -1.58
LMNB1-208ENST00000504788 E7ENQ6 273 aa5.21□□□□□ -1.58
LMNB1-208ENST00000504788 THAP12O43422 761 aa5.21□□□□□ -1.58
LMNB1-208ENST00000504788 GREM1O60565 184 aa5.21□□□□□ -1.58
LMNB1-208ENST00000504788 LSM8O95777 96 aaKnown RBP5.21□□□□□ -1.58
LMNB1-208ENST00000504788 OAS1P00973 400 aaKnown RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms