RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 C3orf70A6NLC5 250 aaPredicted RBP13.94□□□□□ -0.18
LMNA-220ENST00000504687 PQBP1O60828 265 aaKnown RBP13.94□□□□□ -0.18
LMNA-220ENST00000504687 HSF2BPO75031 334 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 ATP2C2O75185 946 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 TJP3O95049 919 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 TRUB2O95900 331 aaKnown RBP13.94□□□□□ -0.18
LMNA-220ENST00000504687 PDGFRAP16234 1089 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 FLT3P36888 993 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 COILP38432 576 aaPredicted RBP13.94□□□□□ -0.18
LMNA-220ENST00000504687 TLE2Q04725 743 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 ADCY1Q08828 1119 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 CCDC14Q49A88 953 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 BOLA3Q53S33 107 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 TFDP3Q5H9I0 405 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 MDH1BQ5I0G3 518 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 OVOS1Q6IE37 1185 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 TRNP1Q6NT89 227 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 AADACL2Q6P093 401 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 SPOCD1Q6ZMY3 1216 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 BEND5Q7L4P6 421 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 STRADAQ7RTN6 431 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 HDXQ7Z353 690 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 BNIPLQ7Z465 357 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 FAM35AQ86V20 835 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 SCUBE3Q8IX30 993 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 KLHL7Q8IXQ5 586 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 IRGQQ8WZA9 623 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 NT5C3BQ969T7 300 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 PCED1BQ96HM7 432 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 CASD1Q96PB1 797 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 LPIN3Q9BQK8 851 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 CNGB3Q9NQW8 809 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 FAM114A2Q9NRY5 505 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 TMEM51Q9NW97 253 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 CACNG4Q9UBN1 327 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 AMACRQ9UHK6 382 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 RASAL2Q9UJF2 1139 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 USP18Q9UMW8 372 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 USTQ9Y2C2 406 aa13.94□□□□□ -0.18
LMNA-220ENST00000504687 KIAA0100Q14667 2235 aaKnown RBP13.94□□□□□ -0.18
LMNA-220ENST00000504687 hCG_1818297A0A087WSY0 165 aa13.93□□□□□ -0.18
LMNA-220ENST00000504687 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.93□□□□□ -0.18
LMNA-220ENST00000504687 MYBPHLA2RUH7 354 aa13.93□□□□□ -0.18
LMNA-220ENST00000504687 MDM4O15151 490 aa13.93□□□□□ -0.18
LMNA-220ENST00000504687 DAB1O75553 588 aa13.93□□□□□ -0.18
LMNA-220ENST00000504687 MYCP01106 439 aaPredicted RBP13.93□□□□□ -0.18
LMNA-220ENST00000504687 RALAP11233 206 aa13.93□□□□□ -0.18
LMNA-220ENST00000504687 ACAT1P24752 427 aaKnown RBP13.93□□□□□ -0.18
LMNA-220ENST00000504687 MIPP30301 263 aa13.93□□□□□ -0.18
LMNA-220ENST00000504687 SDC4P31431 198 aa13.93□□□□□ -0.18
LMNA-220ENST00000504687 CDKN2BP42772 138 aa13.93□□□□□ -0.18
LMNA-220ENST00000504687 BRCC3P46736 316 aa13.93□□□□□ -0.18
LMNA-220ENST00000504687 RGS7P49802 495 aa13.93□□□□□ -0.18
LMNA-220ENST00000504687 ARSEP51690 589 aa13.93□□□□□ -0.18
LMNA-220ENST00000504687 MRPS5P82675 430 aaKnown RBP13.93□□□□□ -0.18
LMNA-220ENST00000504687 DR1Q01658 176 aa13.93□□□□□ -0.18
LMNA-220ENST00000504687 MRPL58Q14197 206 aaKnown RBP13.93□□□□□ -0.18
LMNA-220ENST00000504687 DUPD1Q68J44 220 aa13.93□□□□□ -0.18
LMNA-220ENST00000504687 CNKSR3Q6P9H4 555 aa13.93□□□□□ -0.18
LMNA-220ENST00000504687 CYP4V2Q6ZWL3 525 aaPredicted RBP13.93□□□□□ -0.18
LMNA-220ENST00000504687 ZNF280BQ86YH2 543 aa13.93□□□□□ -0.18
LMNA-220ENST00000504687 PSTKQ8IV42 348 aaKnown RBP13.93□□□□□ -0.18
LMNA-220ENST00000504687 ABI1Q8IZP0 508 aa13.93□□□□□ -0.18
LMNA-220ENST00000504687 EMC1Q8N766 993 aa13.93□□□□□ -0.18
LMNA-220ENST00000504687 GRK7Q8WTQ7 553 aa13.93□□□□□ -0.18
LMNA-220ENST00000504687 MAGOHBQ96A72 148 aaKnown RBP13.93□□□□□ -0.18
LMNA-220ENST00000504687 PIWIL1Q96J94 861 aaKnown RBP13.93□□□□□ -0.18
LMNA-220ENST00000504687 FAM193BQ96PV7 902 aaPredicted RBP13.93□□□□□ -0.18
LMNA-220ENST00000504687 ERP44Q9BS26 406 aa13.93□□□□□ -0.18
LMNA-220ENST00000504687 PRDM16Q9HAZ2 1276 aa13.93□□□□□ -0.18
LMNA-220ENST00000504687 EPB41L5Q9HCM4 733 aa13.93□□□□□ -0.18
LMNA-220ENST00000504687 UTP11Q9Y3A2 253 aaKnown RBP13.93□□□□□ -0.18
LMNA-220ENST00000504687 TCRBV7S2A1N4TA0A589 114 aa13.92□□□□□ -0.18
LMNA-220ENST00000504687 CARNS1A5YM72 827 aa13.92□□□□□ -0.18
LMNA-220ENST00000504687 HHLA1C9JL84 531 aa13.92□□□□□ -0.18
LMNA-220ENST00000504687 B4GALT3O60512 393 aa13.92□□□□□ -0.18
LMNA-220ENST00000504687 KRT1P04264 644 aa13.92□□□□□ -0.18
LMNA-220ENST00000504687 TCF4P15884 667 aa13.92□□□□□ -0.18
LMNA-220ENST00000504687 KDELR1P24390 212 aa13.92□□□□□ -0.18
LMNA-220ENST00000504687 IL1R2P27930 398 aa13.92□□□□□ -0.18
LMNA-220ENST00000504687 MATKP42679 507 aa13.92□□□□□ -0.18
LMNA-220ENST00000504687 TSPY1Q01534 308 aa13.92□□□□□ -0.18
LMNA-220ENST00000504687 SLC7A5Q01650 507 aa13.92□□□□□ -0.18
LMNA-220ENST00000504687 GUCY2DQ02846 1103 aa13.92□□□□□ -0.18
LMNA-220ENST00000504687 YWHAHQ04917 246 aaPredicted RBP13.92□□□□□ -0.18
LMNA-220ENST00000504687 ELAVL2Q12926 359 aaKnown RBP13.92□□□□□ -0.18
LMNA-220ENST00000504687 PDK2Q15119 407 aa13.92□□□□□ -0.18
LMNA-220ENST00000504687 TRIM60Q495X7 471 aa13.92□□□□□ -0.18
LMNA-220ENST00000504687 PM20D1Q6GTS8 502 aa13.92□□□□□ -0.18
LMNA-220ENST00000504687 CCDC137Q6PK04 289 aaKnown RBP13.92□□□□□ -0.18
LMNA-220ENST00000504687 MFSD7Q6UXD7 560 aa13.92□□□□□ -0.18
LMNA-220ENST00000504687 C4orf50Q6ZRC1 276 aa13.92□□□□□ -0.18
LMNA-220ENST00000504687 JAMLQ86YT9 394 aa13.92□□□□□ -0.18
LMNA-220ENST00000504687 MREGQ8N565 214 aa13.92□□□□□ -0.18
LMNA-220ENST00000504687 TTC13Q8NBP0 860 aa13.92□□□□□ -0.18
LMNA-220ENST00000504687 ZMIZ2Q8NF64 920 aa13.92□□□□□ -0.18
LMNA-220ENST00000504687 TET1Q8NFU7 2136 aa13.92□□□□□ -0.18
LMNA-220ENST00000504687 CASKIN2Q8WXE0 1202 aa13.92□□□□□ -0.18
LMNA-220ENST00000504687 FUBP3Q96I24 572 aaKnown RBP eCLIP13.92□□□□□ -0.18
LMNA-220ENST00000504687 SLC2A13Q96QE2 648 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms