RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 KBTBD4Q9NVX7 518 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 MINDY4BA8MYZ0 360 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 ACSL3O95573 720 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 ACAP1Q15027 740 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 KCNT1Q5JUK3 1230 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 GNASQ5JWF2 1037 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 CASC4Q6P4E1 433 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 AVENQ9NQS1 362 aaPredicted RBP6.29□□□□□ -1.4
LINC02397-201ENST00000504409 MAT2BQ9NZL9 334 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 PSMD13Q9UNM6 376 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 B2RBV5 119 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 GOLGA8SH3BPF8 625 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 LRRN2O75325 713 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 ALOX15P16050 662 aaPredicted RBP6.29□□□□□ -1.4
LINC02397-201ENST00000504409 ARL4AP40617 200 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 SLC26A3P40879 764 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 ZNF844Q08AG5 666 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 EIF5AL1Q6IS14 154 aaKnown RBP6.29□□□□□ -1.4
LINC02397-201ENST00000504409 GIPC3Q8TF64 312 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 GDPD5Q8WTR4 605 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 RBM15Q96T37 977 aaKnown RBP eCLIP6.29□□□□□ -1.4
LINC02397-201ENST00000504409 MMS19Q96T76 1030 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 ANKRD33BA6NCL7 494 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 NCAM2O15394 837 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 NDUFS2O75306 463 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 KATNAL2Q8IYT4 538 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 LEMD3Q9Y2U8 911 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 ARHGEF28Q8N1W1 1705 aaKnown RBP6.28□□□□□ -1.4
LINC02397-201ENST00000504409 ERI2A8K979 691 aaKnown RBP6.28□□□□□ -1.4
LINC02397-201ENST00000504409 WDPCPO95876 746 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 FAUP35544 74 aaKnown RBP6.28□□□□□ -1.4
LINC02397-201ENST00000504409 RAB2AP61019 212 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 RPL10AP62906 217 aaKnown RBP6.28□□□□□ -1.4
LINC02397-201ENST00000504409 EXOSC10Q01780 885 aaKnown RBP6.28□□□□□ -1.4
LINC02397-201ENST00000504409 DPYDQ12882 1025 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 PTGDRQ13258 359 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 DIP2AQ14689 1571 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 TMC4Q7Z404 712 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 ADHFE1Q8IWW8 467 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 XXYLT1Q8NBI6 393 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 LRRC20Q8TCA0 184 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 AGBL1Q96MI9 1066 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 DENND2DQ9H6A0 471 aaPredicted RBP6.28□□□□□ -1.4
LINC02397-201ENST00000504409 TDRKHQ9Y2W6 561 aaKnown RBP6.28□□□□□ -1.4
LINC02397-201ENST00000504409 A0A0B4J269 797 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 C2orf74A8MZ97 194 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 LSM8O95777 96 aaKnown RBP6.28□□□□□ -1.4
LINC02397-201ENST00000504409 CFL1P23528 166 aaKnown RBP6.28□□□□□ -1.4
LINC02397-201ENST00000504409 TUBB3Q13509 450 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 C12orf60Q5U649 245 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 DNAJC24Q6P3W2 148 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 MICU2Q8IYU8 434 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 HDAC11Q96DB2 347 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 HIPK3Q9H422 1215 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 ZCCHC17Q9NP64 241 aaKnown RBP6.28□□□□□ -1.4
LINC02397-201ENST00000504409 TTC34A8MYJ7 566 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 AKAP10O43572 662 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 MYL3P08590 195 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 GYS2P54840 703 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 TBRG1Q3YBR2 411 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 LRRC17Q8N6Y2 441 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 SETD6Q8TBK2 473 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 THRSPQ92748 146 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 HNRNPABQ99729 332 aaKnown RBP6.28□□□□□ -1.4
LINC02397-201ENST00000504409 RTKNQ9BST9 563 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 SAYSD1Q9NPB0 183 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 COPZ2Q9P299 210 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 GSTK1Q9Y2Q3 226 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 COQ6Q9Y2Z9 468 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 AP1M2Q9Y6Q5 423 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 ILVBLA1L0T0 632 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 LRRC53A6NM62 1247 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 WRBO00258 174 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 IL1BP01584 269 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 ITGA2BP08514 1039 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 PRKAR1BP31321 381 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 PRKAA1Q13131 559 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 PLEKHM3Q6ZWE6 761 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 TXNDC2Q86VQ3 553 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 DENND6AQ8IWF6 608 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 MYO1HQ8N1T3 1032 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 DAGLBQ8NCG7 672 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 DCAF5Q96JK2 942 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 NMRK1Q9NWW6 199 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 LGALS13Q9UHV8 139 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 HEATR9A2RTY3 570 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 AIREO43918 545 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 MYO1DO94832 1006 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 ZBTB11O95625 1053 aaPredicted RBP6.28□□□□□ -1.4
LINC02397-201ENST00000504409 PTTG1O95997 202 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 TCF4P15884 667 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 ME2P23368 584 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 RCVRNP35243 200 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 QPRTQ15274 297 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 KHDRBS2Q5VWX1 349 aaKnown RBP6.28□□□□□ -1.4
LINC02397-201ENST00000504409 GATAD2AQ86YP4 633 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 RAB43Q86YS6 212 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 PNKPQ96T60 521 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 PHF20Q9BVI0 1012 aa6.28□□□□□ -1.4
LINC02397-201ENST00000504409 RSAD1Q9HA92 442 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms