RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 NRDE2Q9H7Z3 1164 aa5.8□□□□□ -1.48
TRAPPC13-205ENST00000504243 ZBTB26Q9HCK0 441 aa5.8□□□□□ -1.48
TRAPPC13-205ENST00000504243 CASS4Q9NQ75 786 aa5.8□□□□□ -1.48
TRAPPC13-205ENST00000504243 NECTIN3Q9NQS3 549 aa5.8□□□□□ -1.48
TRAPPC13-205ENST00000504243 ANKFY1Q9P2R3 1169 aa5.8□□□□□ -1.48
TRAPPC13-205ENST00000504243 FZD1Q9UP38 647 aa5.8□□□□□ -1.48
TRAPPC13-205ENST00000504243 CYR61O00622 381 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 NPC1O15118 1278 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 NARSO43776 548 aaKnown RBP5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 LPXNO60711 386 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 USP1O94782 785 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 SPDEFO95238 335 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 FSHBP01225 129 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 PDHA1P08559 390 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 ITGAMP11215 1152 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 PECAM1P16284 738 aaPredicted RBP5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 TYRP1P17643 537 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 EGR1P18146 543 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 BMPR1AP36894 532 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 ACVRL1P37023 503 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 PGDP52209 483 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 GPS1Q13098 491 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 MAPKAPK3Q16644 382 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 C4orf46Q504U0 113 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 CERCAMQ5T4B2 595 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 FNDC7Q5VTL7 733 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 ARL6IP4Q66PJ3 421 aaKnown RBP5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 MRNIPQ6NTE8 343 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 TLDC1Q6P9B6 456 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 GATAD2AQ86YP4 633 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 STYXQ8WUJ0 223 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 RUBCNQ92622 972 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 HIST1H2AAQ96QV6 131 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 OSBPL9Q96SU4 736 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 AMBRA1Q9C0C7 1298 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 EPS8L2Q9H6S3 715 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 SLC2A4RGQ9NR83 387 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 TMEM74BQ9NUR3 256 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 IGSF9Q9P2J2 1179 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 DNAJB11Q9UBS4 358 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 CAPN11Q9UMQ6 739 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 USP22Q9UPT9 525 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 SSX2IPQ9Y2D8 614 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 HS3ST3A1Q9Y663 406 aa5.79□□□□□ -1.48
TRAPPC13-205ENST00000504243 CCDC189A1A4V9 331 aa5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 CD3EAPO15446 510 aaKnown RBP5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 ASNA1O43681 348 aa5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 TNFRSF6BO95407 300 aa5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 LMNAP02545 664 aaKnown RBP5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 ADH4P08319 380 aa5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 NTSR1P30989 418 aa5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 GALNT1Q10472 559 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 PRKG1Q13976 671 aa5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 SF3B3Q15393 1217 aaKnown RBP5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 TIGD6Q17RP2 521 aa5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 TMTC4Q5T4D3 741 aa5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 MANEALQ5VSG8 457 aa5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 KCNV1Q6PIU1 500 aa5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 KIAA0408Q6ZU52 694 aa5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 FSTL5Q8N475 847 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 NKAPQ8N5F7 415 aaKnown RBP5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 FAM71BQ8TC56 605 aa5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 SSH3Q8TE77 659 aa5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 ATG4AQ8WYN0 398 aa5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 MYEOVQ96EZ4 313 aa5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 ZNF668Q96K58 619 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 ADAM2Q99965 735 aa5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 GDF15Q99988 308 aa5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 SORBS1Q9BX66 1292 aaKnown RBP5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 TRIM5Q9C035 493 aa5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 ZCWPW1Q9H0M4 648 aa5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 MAGEH1Q9H213 219 aa5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 TMPRSS5Q9H3S3 457 aa5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 MMRN2Q9H8L6 949 aa5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 GLOD4Q9HC38 313 aa5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 AGO4Q9HCK5 861 aaKnown RBP5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 LUZP4Q9P127 313 aa5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 GRHPRQ9UBQ7 328 aa5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 RGS17Q9UGC6 210 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 CCNL1Q9UK58 526 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 PCDHGB3Q9Y5G1 929 aa5.78□□□□□ -1.48
TRAPPC13-205ENST00000504243 MARCH11A6NNE9 402 aa5.77□□□□□ -1.49
TRAPPC13-205ENST00000504243 ACKR2O00590 384 aa5.77□□□□□ -1.49
TRAPPC13-205ENST00000504243 ZSCAN9O15535 394 aaPredicted RBP5.77□□□□□ -1.49
TRAPPC13-205ENST00000504243 KCNQ3O43525 872 aa5.77□□□□□ -1.49
TRAPPC13-205ENST00000504243 CSF1RP07333 972 aa5.77□□□□□ -1.49
TRAPPC13-205ENST00000504243 NR4A1P22736 598 aa5.77□□□□□ -1.49
TRAPPC13-205ENST00000504243 EPHA3P29320 983 aa5.77□□□□□ -1.49
TRAPPC13-205ENST00000504243 GATMP50440 423 aa5.77□□□□□ -1.49
TRAPPC13-205ENST00000504243 RENBPP51606 427 aa5.77□□□□□ -1.49
TRAPPC13-205ENST00000504243 SP2Q02086 613 aa5.77□□□□□ -1.49
TRAPPC13-205ENST00000504243 NSUN2Q08J23 767 aaKnown RBP eCLIP5.77□□□□□ -1.49
TRAPPC13-205ENST00000504243 PTK2BQ14289 1009 aa5.77□□□□□ -1.49
TRAPPC13-205ENST00000504243 LY6KQ17RY6 165 aa5.77□□□□□ -1.49
TRAPPC13-205ENST00000504243 P3H1Q32P28 736 aa5.77□□□□□ -1.49
TRAPPC13-205ENST00000504243 LY6G5CQ5SRR4 150 aa5.77□□□□□ -1.49
TRAPPC13-205ENST00000504243 CLEC9AQ6UXN8 241 aa5.77□□□□□ -1.49
TRAPPC13-205ENST00000504243 LDHAL6AQ6ZMR3 332 aa5.77□□□□□ -1.49
TRAPPC13-205ENST00000504243 TTC30AQ86WT1 665 aa5.77□□□□□ -1.49
TRAPPC13-205ENST00000504243 KRT73Q86Y46 540 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms