RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 SH3PXD2AQ5TCZ1 1133 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 OR6B2Q6IFH4 312 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 HFE2Q6ZVN8 426 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 SLC26A9Q7LBE3 791 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 METTL23Q86XA0 190 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 SCUBE3Q8IX30 993 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 CMTR2Q8IYT2 770 aaKnown RBP7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 ZDHHC14Q8IZN3 488 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 SLC39A11Q8N1S5 342 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 IPO4Q8TEX9 1081 aaKnown RBP7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 FNIP1Q8TF40 1166 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 KCTD13Q8WZ19 329 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 SMARCD1Q96GM5 515 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 IGSF21Q96ID5 467 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 HSFY1Q96LI6 401 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 PEBP4Q96S96 227 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 MED10Q9BTT4 135 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 C11orf84Q9BUA3 381 aaPredicted RBP7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 TUBB2BQ9BVA1 445 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 SELENOOQ9BVL4 669 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 COLEC11Q9BWP8 271 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 MIS12Q9H081 205 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 EPC1Q9H2F5 836 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 CRISPLD1Q9H336 500 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 SYNCQ9H7C4 482 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 CYLDQ9NQC7 956 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 CALCOCO1Q9P1Z2 691 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 WDR35Q9P2L0 1181 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 NR2E1Q9Y466 385 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 PCDHA3Q9Y5H8 950 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 TCRBV7S2A1N4TA0A589 114 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 MIF4GDA9UHW6 222 aaKnown RBP7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 DPYSL4O14531 572 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 TNFRSF10BO14763 440 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 TRAPPC3O43617 180 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 SPOPO43791 374 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 EFCAB14O75071 495 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 LRCH4O75427 683 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 GJB5O95377 273 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 FYNP06241 537 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 PYGMP11217 842 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 BDNFP23560 247 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 CYP2F1P24903 491 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 PSMA2P25787 234 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 IL1R2P27930 398 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 SCNN1AP37088 669 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 SLC1A1P43005 524 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 GPR15P49685 360 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 PGFP49763 221 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 ZNF143P52747 638 aaPredicted RBP7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 EMP3P54852 163 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 RNASE9P60153 205 aaKnown RBP7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 PITX1P78337 314 aaPredicted RBP7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 TAP1Q03518 808 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 C2orf54Q08AI8 447 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 PPIGQ13427 754 aaKnown RBP eCLIP7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 SIX1Q15475 284 aaPredicted RBP7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 C15orf59Q2T9L4 293 aaPredicted RBP7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 CCDC14Q49A88 953 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 ATP13A4Q4VNC1 1196 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 DCUN1D2Q6PH85 259 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 KCNT2Q6UVM3 1135 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 PRSS55Q6UWB4 352 aaPredicted RBP7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 BNIPLQ7Z465 357 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 CEP57Q86XR8 500 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 THEM5Q8N1Q8 247 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 COLGALT1Q8NBJ5 622 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 MSANTD4Q8NCY6 345 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 STKLD1Q8NE28 680 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 ACTRT1Q8TDG2 376 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 RXFP2Q8WXD0 754 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 PBKQ96KB5 322 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 RNPC3Q96LT9 517 aaKnown RBP7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 CFAP57Q96MR6 1250 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 KRTAP3-3Q9BYR6 98 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 KRTAP3-2Q9BYR7 98 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 ULBP1Q9BZM6 244 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 CARD9Q9H257 536 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 CHST7Q9NS84 486 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 RBM12Q9NTZ6 932 aaKnown RBP7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 KLHL11Q9NVR0 708 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 IP6K2Q9UHH9 426 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 USTQ9Y2C2 406 aa7.25□□□□□ -1.25
TOPBP1-203ENST00000503464 ARHGEF37A1IGU5 675 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 CCDC66A2RUB6 948 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 LCHNA4D1U4 455 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 MTMR11A4FU01 709 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 OR6C75A6NL08 312 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 C3orf70A6NLC5 250 aaPredicted RBP7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 YJEFN3A6XGL0 299 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 EFCAB8A8MWE9 144 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 E7ENQ6 273 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 PSTPIP1O43586 416 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 CEP104O60308 925 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 DAB1O75553 588 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 ARHGEF15O94989 841 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 FGBP02675 491 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 RPL17P18621 184 aaKnown RBP7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 GPD1P21695 349 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms