RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	BDNF	P23560	247 aa		11.36	□□□□□ -0.59
CDK11A-222	ENST00000498810	VIPR2	P41587	438 aa		11.36	□□□□□ -0.59
CDK11A-222	ENST00000498810	RAP1GAP	P47736	663 aa		11.36	□□□□□ -0.59
CDK11A-222	ENST00000498810	PRKCQ	Q04759	706 aa		11.36	□□□□□ -0.59
CDK11A-222	ENST00000498810	CCDC142	Q17RM4	750 aa		11.36	□□□□□ -0.59
CDK11A-222	ENST00000498810	SGSM1	Q2NKQ1	1148 aa		11.36	□□□□□ -0.59
CDK11A-222	ENST00000498810	EDRF1	Q3B7T1	1238 aa		11.36	□□□□□ -0.59
CDK11A-222	ENST00000498810	CFAP221	Q4G0U5	840 aa		11.36	□□□□□ -0.59
CDK11A-222	ENST00000498810	SLC44A4	Q53GD3	710 aa		11.36	□□□□□ -0.59
CDK11A-222	ENST00000498810	ZNF658	Q5TYW1	1059 aa	Predicted RBP	11.36	□□□□□ -0.59
CDK11A-222	ENST00000498810	SCARA3	Q6AZY7	606 aa		11.36	□□□□□ -0.59
CDK11A-222	ENST00000498810	VIT	Q6UXI7	678 aa		11.36	□□□□□ -0.59
CDK11A-222	ENST00000498810	KDF1	Q8NAX2	398 aa	Predicted RBP	11.36	□□□□□ -0.59
CDK11A-222	ENST00000498810	PRSS33	Q8NF86	280 aa		11.36	□□□□□ -0.59
CDK11A-222	ENST00000498810	CXorf38	Q8TB03	319 aa		11.36	□□□□□ -0.59
CDK11A-222	ENST00000498810	KBTBD7	Q8WVZ9	684 aa		11.36	□□□□□ -0.59
CDK11A-222	ENST00000498810	DNASE1L2	Q92874	299 aa		11.36	□□□□□ -0.59
CDK11A-222	ENST00000498810	ERCC4	Q92889	916 aa	Predicted RBP	11.36	□□□□□ -0.59
CDK11A-222	ENST00000498810	TNIP3	Q96KP6	325 aa		11.36	□□□□□ -0.59
CDK11A-222	ENST00000498810	ZSWIM3	Q96MP5	696 aa		11.36	□□□□□ -0.59
CDK11A-222	ENST00000498810	MRPL45	Q9BRJ2	306 aa	Known RBP	11.36	□□□□□ -0.59
CDK11A-222	ENST00000498810	ELOVL4	Q9GZR5	314 aa		11.36	□□□□□ -0.59
CDK11A-222	ENST00000498810	TASP1	Q9H6P5	420 aa		11.36	□□□□□ -0.59
CDK11A-222	ENST00000498810	SMYD3	Q9H7B4	428 aa		11.36	□□□□□ -0.59
CDK11A-222	ENST00000498810	DMAC2	Q9NW81	257 aa		11.36	□□□□□ -0.59
CDK11A-222	ENST00000498810	CHMP5	Q9NZZ3	219 aa		11.36	□□□□□ -0.59
CDK11A-222	ENST00000498810	ZMYM5	Q9UJ78	669 aa		11.36	□□□□□ -0.59
CDK11A-222	ENST00000498810	SIT1	Q9Y3P8	196 aa		11.36	□□□□□ -0.59
CDK11A-222	ENST00000498810	PATJ	Q8NI35	1801 aa		11.36	□□□□□ -0.59
CDK11A-222	ENST00000498810	SLC38A8	A6NNN8	435 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810		H0Y858	1186 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	GABRD	O14764	452 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	MAPK13	O15264	365 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	NCAM2	O15394	837 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	ATP2C2	O75185	946 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	STAU1	O95793	577 aa	Known RBP	11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	HLA-DRA	P01903	254 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	CKM	P06732	381 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	FCAR	P24071	287 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	LMO2	P25791	158 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	DDX6	P26196	483 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	PPP1R2	P41236	205 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	GCLM	P48507	274 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	MXI1	P50539	228 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	KPNA1	P52294	538 aa	Predicted RBP	11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	DLG4	P78352	724 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	RELB	Q01201	579 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	NHLH1	Q02575	133 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	NFIL3	Q16649	462 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	ISM2	Q6H9L7	571 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	KLHL10	Q6JEL2	608 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	PHLDB3	Q6NSJ2	640 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	CC2D1A	Q6P1N0	951 aa	Predicted RBP	11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	VSTM1	Q6UX27	236 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	ZNF852	Q6ZMS4	543 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	GAREM2	Q75VX8	874 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	ARID3B	Q8IVW6	561 aa	Predicted RBP	11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	MAB21L3	Q8N8X9	362 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	B3GALNT2	Q8NCR0	500 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	MYCBPAP	Q8TBZ2	947 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	TAF4B	Q92750	862 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	PCED1B	Q96HM7	432 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	TIGD1	Q96MW7	591 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	BCO2	Q9BYV7	579 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	PLA2G2F	Q9BZM2	168 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	FOXQ1	Q9C009	403 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	HEBP1	Q9NRV9	189 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	THG1L	Q9NWX6	298 aa	Known RBP	11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	NDRG2	Q9UN36	371 aa	Known RBP	11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	PCDHB9	Q9Y5E1	797 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	COL4A2	P08572	1712 aa		11.35	□□□□□ -0.59
CDK11A-222	ENST00000498810	COL4A3	Q01955	1670 aa		11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	KANSL1L	A0AUZ9	987 aa		11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	FIGNL2	A6NMB9	653 aa		11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	IKBKB	O14920	756 aa		11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	MOSPD3	O75425	235 aa		11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	AKAP3	O75969	853 aa		11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	ABL1	P00519	1130 aa		11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	DCN	P07585	359 aa	Known RBP	11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	PTPN1	P18031	435 aa	Known RBP	11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	PRCP	P42785	496 aa		11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	MAGEA11	P43364	429 aa		11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	PDE6C	P51160	858 aa		11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	NLRP12	P59046	1061 aa		11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	NOP14	P78316	857 aa	Known RBP	11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	NR1H3	Q13133	447 aa		11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	ZACN	Q401N2	412 aa		11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	CCDC40	Q4G0X9	1142 aa		11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	DENND5B	Q6ZUT9	1274 aa		11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	SV2A	Q7L0J3	742 aa		11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	MFSD6L	Q8IWD5	586 aa		11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	CCDC105	Q8IYK2	499 aa		11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	DTWD2	Q8NBA8	298 aa		11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	PJA1	Q8NG27	643 aa		11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	PLEKHO2	Q8TD55	490 aa		11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	BPIFB1	Q8TDL5	484 aa		11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	ELMO3	Q96BJ8	720 aa		11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	EEF2KMT	Q96G04	330 aa		11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	LRRC3	Q9BY71	257 aa		11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	DPEP3	Q9H4B8	488 aa		11.34	□□□□□ -0.59

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