RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 PARVGQ9HBI0 331 aa9.77□□□□□ -0.85
CCDC171-209ENST00000498725 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.77□□□□□ -0.85
CCDC171-209ENST00000498725 TRPM5Q9NZQ8 1165 aa9.77□□□□□ -0.85
CCDC171-209ENST00000498725 CFAP97Q9P2B7 532 aa9.77□□□□□ -0.85
CCDC171-209ENST00000498725 ODF2LQ9ULJ1 636 aa9.77□□□□□ -0.85
CCDC171-209ENST00000498725 ARHGAP26Q9UNA1 814 aa9.77□□□□□ -0.85
CCDC171-209ENST00000498725 CYP8B1Q9UNU6 501 aa9.77□□□□□ -0.85
CCDC171-209ENST00000498725 RAXQ9Y2V3 346 aa9.77□□□□□ -0.85
CCDC171-209ENST00000498725 SNX9Q9Y5X1 595 aa9.77□□□□□ -0.85
CCDC171-209ENST00000498725 CPQQ9Y646 472 aa9.77□□□□□ -0.85
CCDC171-209ENST00000498725 GON4LQ3T8J9 2241 aa9.76□□□□□ -0.85
CCDC171-209ENST00000498725 TBC1D3BA6NDS4 549 aa9.76□□□□□ -0.85
CCDC171-209ENST00000498725 GOLGA8CPA6NN73 597 aa9.76□□□□□ -0.85
CCDC171-209ENST00000498725 UPK3BL1B0FP48 263 aa9.76□□□□□ -0.85
CCDC171-209ENST00000498725 UPK3BL2E5RIL1 263 aa9.76□□□□□ -0.85
CCDC171-209ENST00000498725 TBCAO75347 108 aaKnown RBP9.76□□□□□ -0.85
CCDC171-209ENST00000498725 PDGFRBP09619 1106 aa9.76□□□□□ -0.85
CCDC171-209ENST00000498725 ADH5P11766 374 aa9.76□□□□□ -0.85
CCDC171-209ENST00000498725 GABRG2P18507 467 aa9.76□□□□□ -0.85
CCDC171-209ENST00000498725 BDNFP23560 247 aa9.76□□□□□ -0.85
CCDC171-209ENST00000498725 KIR2DL1P43626 348 aaPredicted RBP9.76□□□□□ -0.85
CCDC171-209ENST00000498725 CYP27A1Q02318 531 aa9.76□□□□□ -0.85
CCDC171-209ENST00000498725 PLEKHG6Q3KR16 790 aa9.76□□□□□ -0.85
CCDC171-209ENST00000498725 TMEM119Q4V9L6 283 aa9.76□□□□□ -0.85
CCDC171-209ENST00000498725 RHBDF2Q6PJF5 856 aa9.76□□□□□ -0.85
CCDC171-209ENST00000498725 SLC41A1Q8IVJ1 513 aa9.76□□□□□ -0.85
CCDC171-209ENST00000498725 CSGALNACT2Q8N6G5 542 aa9.76□□□□□ -0.85
CCDC171-209ENST00000498725 ZNF513Q8N8E2 541 aaPredicted RBP9.76□□□□□ -0.85
CCDC171-209ENST00000498725 RASSF8Q8NHQ8 419 aa9.76□□□□□ -0.85
CCDC171-209ENST00000498725 CEP76Q8TAP6 659 aa9.76□□□□□ -0.85
CCDC171-209ENST00000498725 SAAL1Q96ER3 474 aa9.76□□□□□ -0.85
CCDC171-209ENST00000498725 HSPA12BQ96MM6 686 aa9.76□□□□□ -0.85
CCDC171-209ENST00000498725 PKMYT1Q99640 499 aa9.76□□□□□ -0.85
CCDC171-209ENST00000498725 FAM213AQ9BRX8 229 aa9.76□□□□□ -0.85
CCDC171-209ENST00000498725 SLC6A17Q9H1V8 727 aa9.76□□□□□ -0.85
CCDC171-209ENST00000498725 CAPN10Q9HC96 672 aa9.76□□□□□ -0.85
CCDC171-209ENST00000498725 ABCB6Q9NP58 842 aa9.76□□□□□ -0.85
CCDC171-209ENST00000498725 KCND2Q9NZV8 630 aa9.76□□□□□ -0.85
CCDC171-209ENST00000498725 CALCOCO1Q9P1Z2 691 aa9.76□□□□□ -0.85
CCDC171-209ENST00000498725 MAGEC2Q9UBF1 373 aaPredicted RBP9.76□□□□□ -0.85
CCDC171-209ENST00000498725 LIMCH1Q9UPQ0 1083 aa9.76□□□□□ -0.85
CCDC171-209ENST00000498725 CACNA1EQ15878 2313 aa9.76□□□□□ -0.85
CCDC171-209ENST00000498725 TMEM131Q92545 1883 aa9.75□□□□□ -0.85
CCDC171-209ENST00000498725 FAM221BA6H8Z2 402 aa9.75□□□□□ -0.85
CCDC171-209ENST00000498725 GOLGA8IPA6NC78 632 aa9.75□□□□□ -0.85
CCDC171-209ENST00000498725 GOLGA8JA6NMD2 632 aa9.75□□□□□ -0.85
CCDC171-209ENST00000498725 IL18RAPO95256 599 aa9.75□□□□□ -0.85
CCDC171-209ENST00000498725 ADH1CP00326 375 aa9.75□□□□□ -0.85
CCDC171-209ENST00000498725 SYPP08247 313 aa9.75□□□□□ -0.85
CCDC171-209ENST00000498725 IRF1P10914 325 aa9.75□□□□□ -0.85
CCDC171-209ENST00000498725 MBL2P11226 248 aaPredicted RBP9.75□□□□□ -0.85
CCDC171-209ENST00000498725 HOXB2P14652 356 aa9.75□□□□□ -0.85
CCDC171-209ENST00000498725 LMO2P25791 158 aa9.75□□□□□ -0.85
CCDC171-209ENST00000498725 ANXA13P27216 316 aa9.75□□□□□ -0.85
CCDC171-209ENST00000498725 MAOBP27338 520 aa9.75□□□□□ -0.85
CCDC171-209ENST00000498725 PNPLA4P41247 253 aa9.75□□□□□ -0.85
CCDC171-209ENST00000498725 GRIA2P42262 883 aa9.75□□□□□ -0.85
CCDC171-209ENST00000498725 DPP6P42658 865 aa9.75□□□□□ -0.85
CCDC171-209ENST00000498725 PDE6CP51160 858 aa9.75□□□□□ -0.85
CCDC171-209ENST00000498725 HMGN5P82970 282 aaKnown RBP9.75□□□□□ -0.85
CCDC171-209ENST00000498725 GTF2BQ00403 316 aa9.75□□□□□ -0.85
CCDC171-209ENST00000498725 LY6G5CQ5SRR4 150 aa9.75□□□□□ -0.85
CCDC171-209ENST00000498725 C10orf76Q5T2E6 689 aa9.75□□□□□ -0.85
CCDC171-209ENST00000498725 PEAR1Q5VY43 1037 aaPredicted RBP9.75□□□□□ -0.85
CCDC171-209ENST00000498725 SLFN12LQ6IEE8 588 aa9.75□□□□□ -0.85
CCDC171-209ENST00000498725 SLC36A4Q6YBV0 504 aa9.75□□□□□ -0.85
CCDC171-209ENST00000498725 NAXDQ8IW45 347 aa9.75□□□□□ -0.85
CCDC171-209ENST00000498725 TMEM86AQ8N2M4 240 aa9.75□□□□□ -0.85
CCDC171-209ENST00000498725 C1orf127Q8N9H9 656 aa9.75□□□□□ -0.85
CCDC171-209ENST00000498725 TRIML1Q8N9V2 468 aa9.75□□□□□ -0.85
CCDC171-209ENST00000498725 SETD7Q8WTS6 366 aaKnown RBP9.75□□□□□ -0.85
CCDC171-209ENST00000498725 MYLPFQ96A32 169 aa9.75□□□□□ -0.85
CCDC171-209ENST00000498725 CALML4Q96GE6 196 aa9.75□□□□□ -0.85
CCDC171-209ENST00000498725 CRELD1Q96HD1 420 aa9.75□□□□□ -0.85
CCDC171-209ENST00000498725 SYT15Q9BQS2 421 aa9.75□□□□□ -0.85
CCDC171-209ENST00000498725 LLPHQ9BRT6 129 aaKnown RBP9.75□□□□□ -0.85
CCDC171-209ENST00000498725 CD93Q9NPY3 652 aa9.75□□□□□ -0.85
CCDC171-209ENST00000498725 TBC1D7Q9P0N9 293 aa9.75□□□□□ -0.85
CCDC171-209ENST00000498725 MYH10P35580 1976 aa9.75□□□□□ -0.85
CCDC171-209ENST00000498725 IGHV1OR15-9A0A0B4J2B8 117 aa9.74□□□□□ -0.85
CCDC171-209ENST00000498725 SLC9A3R1O14745 358 aaPredicted RBP9.74□□□□□ -0.85
CCDC171-209ENST00000498725 TRIM24O15164 1050 aa9.74□□□□□ -0.85
CCDC171-209ENST00000498725 NDUFS2O75306 463 aa9.74□□□□□ -0.85
CCDC171-209ENST00000498725 PRB1P04280 392 aa9.74□□□□□ -0.85
CCDC171-209ENST00000498725 CHRM1P11229 460 aaPredicted RBP9.74□□□□□ -0.85
CCDC171-209ENST00000498725 TCF3P15923 654 aa9.74□□□□□ -0.85
CCDC171-209ENST00000498725 PCSK1P29120 753 aa9.74□□□□□ -0.85
CCDC171-209ENST00000498725 HOXD12P35452 270 aa9.74□□□□□ -0.85
CCDC171-209ENST00000498725 DDIT3P35638 169 aa9.74□□□□□ -0.85
CCDC171-209ENST00000498725 TNFRSF4P43489 277 aa9.74□□□□□ -0.85
CCDC171-209ENST00000498725 LHX1P48742 406 aa9.74□□□□□ -0.85
CCDC171-209ENST00000498725 SOWAHAQ2M3V2 549 aa9.74□□□□□ -0.85
CCDC171-209ENST00000498725 ANO4Q32M45 955 aa9.74□□□□□ -0.85
CCDC171-209ENST00000498725 CFAP221Q4G0U5 840 aa9.74□□□□□ -0.85
CCDC171-209ENST00000498725 CCDC157Q569K6 752 aa9.74□□□□□ -0.85
CCDC171-209ENST00000498725 SPDYCQ5MJ68 293 aa9.74□□□□□ -0.85
CCDC171-209ENST00000498725 BTBD8Q5XKL5 378 aa9.74□□□□□ -0.85
CCDC171-209ENST00000498725 CCNI2Q6ZMN8 369 aaPredicted RBP9.74□□□□□ -0.85
CCDC171-209ENST00000498725 C4orf50Q6ZRC1 276 aa9.74□□□□□ -0.85
CCDC171-209ENST00000498725 DENND5BQ6ZUT9 1274 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms