RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 TOGARAM2Q6ZUX3 1019 aa17.65■□□□□ 0.42
VIM-208ENST00000497849 KIAA1958Q8N8K9 716 aa17.65■□□□□ 0.42
VIM-208ENST00000497849 CRELD1Q96HD1 420 aa17.65■□□□□ 0.42
VIM-208ENST00000497849 ZNF560Q96MR9 790 aa17.65■□□□□ 0.42
VIM-208ENST00000497849 FIZ1Q96SL8 496 aa17.65■□□□□ 0.42
VIM-208ENST00000497849 REEP2Q9BRK0 252 aa17.65■□□□□ 0.42
VIM-208ENST00000497849 DKK4Q9UBT3 224 aa17.65■□□□□ 0.42
VIM-208ENST00000497849 HCN2Q9UL51 889 aa17.65■□□□□ 0.42
VIM-208ENST00000497849 GOLGA4Q13439 2230 aaKnown RBP17.64■□□□□ 0.42
VIM-208ENST00000497849 LAD1O00515 517 aa17.64■□□□□ 0.41
VIM-208ENST00000497849 PFKLP17858 780 aa17.64■□□□□ 0.41
VIM-208ENST00000497849 PDE6CP51160 858 aa17.64■□□□□ 0.41
VIM-208ENST00000497849 WNT7BP56706 349 aa17.64■□□□□ 0.41
VIM-208ENST00000497849 ADALQ6DHV7 355 aa17.64■□□□□ 0.41
VIM-208ENST00000497849 GLRX5Q86SX6 157 aa17.64■□□□□ 0.41
VIM-208ENST00000497849 SPATA2LQ8IUW3 424 aaPredicted RBP17.64■□□□□ 0.41
VIM-208ENST00000497849 KCTD17Q8N5Z5 321 aa17.64■□□□□ 0.41
VIM-208ENST00000497849 TRIML1Q8N9V2 468 aa17.64■□□□□ 0.41
VIM-208ENST00000497849 FUBP3Q96I24 572 aaKnown RBP eCLIP17.64■□□□□ 0.41
VIM-208ENST00000497849 HSPA12BQ96MM6 686 aa17.64■□□□□ 0.41
VIM-208ENST00000497849 ODF2LQ9ULJ1 636 aa17.64■□□□□ 0.41
VIM-208ENST00000497849 APOBEC2Q9Y235 224 aaKnown RBP17.64■□□□□ 0.41
VIM-208ENST00000497849 OLFM2O95897 454 aa17.63■□□□□ 0.41
VIM-208ENST00000497849 PRB1P04280 392 aa17.63■□□□□ 0.41
VIM-208ENST00000497849 SCP2P22307 547 aa17.63■□□□□ 0.41
VIM-208ENST00000497849 POLR2BP30876 1174 aaKnown RBP17.63■□□□□ 0.41
VIM-208ENST00000497849 PNPLA4P41247 253 aa17.63■□□□□ 0.41
VIM-208ENST00000497849 MAGEA11P43364 429 aa17.63■□□□□ 0.41
VIM-208ENST00000497849 ZNF131P52739 623 aa17.63■□□□□ 0.41
VIM-208ENST00000497849 GTF2BQ00403 316 aa17.63■□□□□ 0.41
VIM-208ENST00000497849 MYL7Q01449 175 aa17.63■□□□□ 0.41
VIM-208ENST00000497849 GNL2Q13823 731 aaKnown RBP17.63■□□□□ 0.41
VIM-208ENST00000497849 PLEKHG6Q3KR16 790 aa17.63■□□□□ 0.41
VIM-208ENST00000497849 MYCT1Q8N699 235 aa17.63■□□□□ 0.41
VIM-208ENST00000497849 IKZF4Q9H2S9 585 aa17.63■□□□□ 0.41
VIM-208ENST00000497849 SMPD4Q9NXE4 827 aa17.63■□□□□ 0.41
VIM-208ENST00000497849 KIAA1522Q9P206 1035 aaPredicted RBP17.63■□□□□ 0.41
VIM-208ENST00000497849 AGO2Q9UKV8 859 aaKnown RBP17.63■□□□□ 0.41
VIM-208ENST00000497849 PCOLCE2Q9UKZ9 415 aa17.63■□□□□ 0.41
VIM-208ENST00000497849 CPQQ9Y646 472 aa17.63■□□□□ 0.41
VIM-208ENST00000497849 STYXL1Q9Y6J8 313 aa17.63■□□□□ 0.41
VIM-208ENST00000497849 A0A1W2PQF6 199 aa17.62■□□□□ 0.41
VIM-208ENST00000497849 ZNF840PA6NDX5 716 aa17.62■□□□□ 0.41
VIM-208ENST00000497849 SLC9A3R1O14745 358 aaPredicted RBP17.62■□□□□ 0.41
VIM-208ENST00000497849 GABRDO14764 452 aa17.62■□□□□ 0.41
VIM-208ENST00000497849 TRAK2O60296 914 aa17.62■□□□□ 0.41
VIM-208ENST00000497849 HUS1O60921 280 aa17.62■□□□□ 0.41
VIM-208ENST00000497849 ADH5P11766 374 aa17.62■□□□□ 0.41
VIM-208ENST00000497849 POU5F1Q01860 360 aaKnown RBP17.62■□□□□ 0.41
VIM-208ENST00000497849 TMEM119Q4V9L6 283 aa17.62■□□□□ 0.41
VIM-208ENST00000497849 FAM171BQ6P995 826 aa17.62■□□□□ 0.41
VIM-208ENST00000497849 TMPRSS7Q7RTY8 843 aa17.62■□□□□ 0.41
VIM-208ENST00000497849 MIB1Q86YT6 1006 aa17.62■□□□□ 0.41
VIM-208ENST00000497849 TMEM86AQ8N2M4 240 aa17.62■□□□□ 0.41
VIM-208ENST00000497849 ZNF513Q8N8E2 541 aaPredicted RBP17.62■□□□□ 0.41
VIM-208ENST00000497849 CXorf38Q8TB03 319 aa17.62■□□□□ 0.41
VIM-208ENST00000497849 ZNF419Q96HQ0 510 aaPredicted RBP17.62■□□□□ 0.41
VIM-208ENST00000497849 SPATA17Q96L03 361 aa17.62■□□□□ 0.41
VIM-208ENST00000497849 CD248Q9HCU0 757 aa17.62■□□□□ 0.41
VIM-208ENST00000497849 CD93Q9NPY3 652 aa17.62■□□□□ 0.41
VIM-208ENST00000497849 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.62■□□□□ 0.41
VIM-208ENST00000497849 TRPM5Q9NZQ8 1165 aa17.62■□□□□ 0.41
VIM-208ENST00000497849 AGAP1Q9UPQ3 857 aa17.62■□□□□ 0.41
VIM-208ENST00000497849 CFAP46Q8IYW2 2715 aa17.61■□□□□ 0.41
VIM-208ENST00000497849 TENM4Q6N022 2769 aa17.61■□□□□ 0.41
VIM-208ENST00000497849 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.61■□□□□ 0.41
VIM-208ENST00000497849 ATP2C2O75185 946 aa17.61■□□□□ 0.41
VIM-208ENST00000497849 ADH1CP00326 375 aa17.61■□□□□ 0.41
VIM-208ENST00000497849 ITGB3P05106 788 aa17.61■□□□□ 0.41
VIM-208ENST00000497849 HOXB2P14652 356 aa17.61■□□□□ 0.41
VIM-208ENST00000497849 GRIK2Q13002 908 aa17.61■□□□□ 0.41
VIM-208ENST00000497849 LY6G5CQ5SRR4 150 aa17.61■□□□□ 0.41
VIM-208ENST00000497849 DENND5BQ6ZUT9 1274 aa17.61■□□□□ 0.41
VIM-208ENST00000497849 NT5DC4Q86YG4 428 aa17.61■□□□□ 0.41
VIM-208ENST00000497849 MARCH9Q86YJ5 346 aa17.61■□□□□ 0.41
VIM-208ENST00000497849 ETFBKMTQ8IXQ9 262 aa17.61■□□□□ 0.41
VIM-208ENST00000497849 C1orf127Q8N9H9 656 aa17.61■□□□□ 0.41
VIM-208ENST00000497849 KCNV2Q8TDN2 545 aa17.61■□□□□ 0.41
VIM-208ENST00000497849 FAM84AQ96KN4 292 aa17.61■□□□□ 0.41
VIM-208ENST00000497849 KIF2CQ99661 725 aa17.61■□□□□ 0.41
VIM-208ENST00000497849 UPF2Q9HAU5 1272 aaKnown RBP17.61■□□□□ 0.41
VIM-208ENST00000497849 PARVGQ9HBI0 331 aa17.61■□□□□ 0.41
VIM-208ENST00000497849 TOR4AQ9NXH8 423 aa17.61■□□□□ 0.41
VIM-208ENST00000497849 CFAP97Q9P2B7 532 aa17.61■□□□□ 0.41
VIM-208ENST00000497849 CYP8B1Q9UNU6 501 aa17.61■□□□□ 0.41
VIM-208ENST00000497849 A0A087WV48 116 aa17.6■□□□□ 0.41
VIM-208ENST00000497849 TBC1D3BA6NDS4 549 aa17.6■□□□□ 0.41
VIM-208ENST00000497849 C1QL1O75973 258 aa17.6■□□□□ 0.41
VIM-208ENST00000497849 FAM13AO94988 1023 aa17.6■□□□□ 0.41
VIM-208ENST00000497849 OAS1P00973 400 aaKnown RBP17.6■□□□□ 0.41
VIM-208ENST00000497849 NDUFV2P19404 249 aa17.6■□□□□ 0.41
VIM-208ENST00000497849 MAOBP27338 520 aa17.6■□□□□ 0.41
VIM-208ENST00000497849 ADSSP30520 456 aa17.6■□□□□ 0.41
VIM-208ENST00000497849 WASP42768 502 aa17.6■□□□□ 0.41
VIM-208ENST00000497849 NEK4P51957 841 aa17.6■□□□□ 0.41
VIM-208ENST00000497849 CYP4F3Q08477 520 aa17.6■□□□□ 0.41
VIM-208ENST00000497849 C19orf57Q0VDD7 668 aa17.6■□□□□ 0.41
VIM-208ENST00000497849 SLFN12LQ6IEE8 588 aa17.6■□□□□ 0.41
VIM-208ENST00000497849 GPBP1Q86WP2 473 aa17.6■□□□□ 0.41
VIM-208ENST00000497849 CCDC83Q8IWF9 413 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms