RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 CIITAP33076 1130 aa8.42□□□□□ -1.06
VPS45-210ENST00000497638 MLH1P40692 756 aa8.42□□□□□ -1.06
VPS45-210ENST00000497638 FNTBP49356 437 aa8.42□□□□□ -1.06
VPS45-210ENST00000497638 SATB1Q01826 763 aa8.42□□□□□ -1.06
VPS45-210ENST00000497638 TEKQ02763 1124 aa8.42□□□□□ -1.06
VPS45-210ENST00000497638 PTH1RQ03431 593 aa8.42□□□□□ -1.06
VPS45-210ENST00000497638 UGCGQ16739 394 aa8.42□□□□□ -1.06
VPS45-210ENST00000497638 PRR16Q569H4 304 aa8.42□□□□□ -1.06
VPS45-210ENST00000497638 STPG1Q5TH74 334 aa8.42□□□□□ -1.06
VPS45-210ENST00000497638 JAKMIP3Q5VZ66 844 aa8.42□□□□□ -1.06
VPS45-210ENST00000497638 TTLL10Q6ZVT0 673 aa8.42□□□□□ -1.06
VPS45-210ENST00000497638 CEP68Q76N32 757 aa8.42□□□□□ -1.06
VPS45-210ENST00000497638 RTL10Q7L3V2 364 aa8.42□□□□□ -1.06
VPS45-210ENST00000497638 MICU3Q86XE3 530 aa8.42□□□□□ -1.06
VPS45-210ENST00000497638 SPEM1Q8N4L4 309 aa8.42□□□□□ -1.06
VPS45-210ENST00000497638 RDM1Q8NG50 284 aa8.42□□□□□ -1.06
VPS45-210ENST00000497638 ELSPBP1Q96BH3 223 aa8.42□□□□□ -1.06
VPS45-210ENST00000497638 CCDC51Q96ER9 411 aa8.42□□□□□ -1.06
VPS45-210ENST00000497638 LOXL4Q96JB6 756 aa8.42□□□□□ -1.06
VPS45-210ENST00000497638 CEP89Q96ST8 783 aa8.42□□□□□ -1.06
VPS45-210ENST00000497638 GAD1Q99259 594 aa8.42□□□□□ -1.06
VPS45-210ENST00000497638 RIT2Q99578 217 aa8.42□□□□□ -1.06
VPS45-210ENST00000497638 BRD9Q9H8M2 597 aa8.42□□□□□ -1.06
VPS45-210ENST00000497638 IFT122Q9HBG6 1241 aa8.42□□□□□ -1.06
VPS45-210ENST00000497638 RBM28Q9NW13 759 aaKnown RBP8.42□□□□□ -1.06
VPS45-210ENST00000497638 MRPS23Q9Y3D9 190 aaKnown RBP8.42□□□□□ -1.06
VPS45-210ENST00000497638 SF3B1O75533 1304 aaKnown RBP eCLIP8.42□□□□□ -1.06
VPS45-210ENST00000497638 ZMYM2Q9UBW7 1377 aa8.42□□□□□ -1.06
VPS45-210ENST00000497638 PSPNO60542 156 aa8.41□□□□□ -1.06
VPS45-210ENST00000497638 GAS7O60861 476 aa8.41□□□□□ -1.06
VPS45-210ENST00000497638 INHBBP09529 407 aa8.41□□□□□ -1.06
VPS45-210ENST00000497638 RPL10P27635 214 aaKnown RBP8.41□□□□□ -1.06
VPS45-210ENST00000497638 SCNN1GP51170 649 aa8.41□□□□□ -1.06
VPS45-210ENST00000497638 GALK1P51570 392 aa8.41□□□□□ -1.06
VPS45-210ENST00000497638 DLG4P78352 724 aa8.41□□□□□ -1.06
VPS45-210ENST00000497638 PCBP1Q15365 356 aaKnown RBP eCLIP8.41□□□□□ -1.06
VPS45-210ENST00000497638 PDXDC1Q6P996 788 aa8.41□□□□□ -1.06
VPS45-210ENST00000497638 C1orf228Q6PIY5 440 aa8.41□□□□□ -1.06
VPS45-210ENST00000497638 PRSS55Q6UWB4 352 aaPredicted RBP8.41□□□□□ -1.06
VPS45-210ENST00000497638 LRSAM1Q6UWE0 723 aa8.41□□□□□ -1.06
VPS45-210ENST00000497638 DNAJC14Q6Y2X3 702 aaPredicted RBP8.41□□□□□ -1.06
VPS45-210ENST00000497638 REC114Q7Z4M0 266 aa8.41□□□□□ -1.06
VPS45-210ENST00000497638 CHD1LQ86WJ1 897 aa8.41□□□□□ -1.06
VPS45-210ENST00000497638 RAB11FIP4Q86YS3 637 aa8.41□□□□□ -1.06
VPS45-210ENST00000497638 SMC5Q8IY18 1101 aa8.41□□□□□ -1.06
VPS45-210ENST00000497638 HACE1Q8IYU2 909 aa8.41□□□□□ -1.06
VPS45-210ENST00000497638 REXO1Q8N1G1 1221 aaKnown RBP8.41□□□□□ -1.06
VPS45-210ENST00000497638 FBXO27Q8NI29 283 aa8.41□□□□□ -1.06
VPS45-210ENST00000497638 SLC7A14Q8TBB6 771 aa8.41□□□□□ -1.06
VPS45-210ENST00000497638 FAM3CQ92520 227 aa8.41□□□□□ -1.06
VPS45-210ENST00000497638 LENG9Q96B70 501 aa8.41□□□□□ -1.06
VPS45-210ENST00000497638 TTPALQ9BTX7 342 aa8.41□□□□□ -1.06
VPS45-210ENST00000497638 LSM14BQ9BX40 385 aaKnown RBP8.41□□□□□ -1.06
VPS45-210ENST00000497638 TEKT3Q9BXF9 490 aa8.41□□□□□ -1.06
VPS45-210ENST00000497638 LMAN1LQ9HAT1 526 aa8.41□□□□□ -1.06
VPS45-210ENST00000497638 TRPV5Q9NQA5 729 aa8.41□□□□□ -1.06
VPS45-210ENST00000497638 EBF1Q9UH73 591 aa8.41□□□□□ -1.06
VPS45-210ENST00000497638 ZMYM5Q9UJ78 669 aa8.41□□□□□ -1.06
VPS45-210ENST00000497638 IPPQ9Y573 584 aa8.41□□□□□ -1.06
VPS45-210ENST00000497638 COL4A3BPQ9Y5P4 624 aa8.41□□□□□ -1.06
VPS45-210ENST00000497638 GCN1Q92616 2671 aaKnown RBP8.41□□□□□ -1.06
VPS45-210ENST00000497638 COL4A2P08572 1712 aa8.4□□□□□ -1.06
VPS45-210ENST00000497638 DMXL2Q8TDJ6 3036 aa8.4□□□□□ -1.06
VPS45-210ENST00000497638 MYOCOSA0A1B0GUC4 107 aa8.4□□□□□ -1.06
VPS45-210ENST00000497638 SSU72P8A0A1W2PR75 194 aa8.4□□□□□ -1.06
VPS45-210ENST00000497638 ESYT2A0FGR8 921 aa8.4□□□□□ -1.06
VPS45-210ENST00000497638 CHMP2AO43633 222 aa8.4□□□□□ -1.06
VPS45-210ENST00000497638 DNAJA2O60884 412 aa8.4□□□□□ -1.06
VPS45-210ENST00000497638 SEMA7AO75326 666 aa8.4□□□□□ -1.06
VPS45-210ENST00000497638 TADA2AO75478 443 aa8.4□□□□□ -1.06
VPS45-210ENST00000497638 ERLIN2O94905 339 aa8.4□□□□□ -1.06
VPS45-210ENST00000497638 EPN2O95208 641 aa8.4□□□□□ -1.06
VPS45-210ENST00000497638 AXLP30530 894 aa8.4□□□□□ -1.06
VPS45-210ENST00000497638 HOXA6P31267 233 aa8.4□□□□□ -1.06
VPS45-210ENST00000497638 ELAVL2Q12926 359 aaKnown RBP8.4□□□□□ -1.06
VPS45-210ENST00000497638 GRIK3Q13003 919 aa8.4□□□□□ -1.06
VPS45-210ENST00000497638 SRSF5Q13243 272 aaKnown RBP8.4□□□□□ -1.06
VPS45-210ENST00000497638 LRRC32Q14392 662 aa8.4□□□□□ -1.06
VPS45-210ENST00000497638 SF3A2Q15428 464 aaKnown RBP8.4□□□□□ -1.06
VPS45-210ENST00000497638 PSMD5Q16401 504 aa8.4□□□□□ -1.06
VPS45-210ENST00000497638 RTP2Q5QGT7 225 aa8.4□□□□□ -1.06
VPS45-210ENST00000497638 TANGO2Q6ICL3 276 aa8.4□□□□□ -1.06
VPS45-210ENST00000497638 NOTUMQ6P988 496 aa8.4□□□□□ -1.06
VPS45-210ENST00000497638 SYNE3Q6ZMZ3 975 aa8.4□□□□□ -1.06
VPS45-210ENST00000497638 SGMS1Q86VZ5 419 aa8.4□□□□□ -1.06
VPS45-210ENST00000497638 EXOC8Q8IYI6 725 aa8.4□□□□□ -1.06
VPS45-210ENST00000497638 EXOC6Q8TAG9 804 aa8.4□□□□□ -1.06
VPS45-210ENST00000497638 ENOX1Q8TC92 643 aaKnown RBP8.4□□□□□ -1.06
VPS45-210ENST00000497638 ING5Q8WYH8 240 aa8.4□□□□□ -1.06
VPS45-210ENST00000497638 MSANTD3Q96H12 275 aa8.4□□□□□ -1.06
VPS45-210ENST00000497638 CLSTN3Q9BQT9 956 aa8.4□□□□□ -1.06
VPS45-210ENST00000497638 TRMT61BQ9BVS5 477 aaKnown RBP8.4□□□□□ -1.06
VPS45-210ENST00000497638 PLA2G2FQ9BZM2 168 aa8.4□□□□□ -1.06
VPS45-210ENST00000497638 ZNF552Q9H707 407 aaPredicted RBP8.4□□□□□ -1.06
VPS45-210ENST00000497638 DNMT3BQ9UBC3 853 aaKnown RBP8.4□□□□□ -1.06
VPS45-210ENST00000497638 GIT1Q9Y2X7 761 aa8.4□□□□□ -1.06
VPS45-210ENST00000497638 PCDHGA5Q9Y5G8 931 aa8.4□□□□□ -1.06
VPS45-210ENST00000497638 PIAS3Q9Y6X2 628 aa8.4□□□□□ -1.06
VPS45-210ENST00000497638 ASH1LQ9NR48 2969 aaKnown RBP8.39□□□□□ -1.07
VPS45-210ENST00000497638 TMEM150BA6NC51 233 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms