RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 CYP3A5P20815 502 aa20.89■□□□□ 0.93
ACTN4-208ENST00000497637 CXCR5P32302 372 aa20.89■□□□□ 0.93
ACTN4-208ENST00000497637 CDH5P33151 784 aaPredicted RBP20.89■□□□□ 0.93
ACTN4-208ENST00000497637 RAD23BP54727 409 aa20.89■□□□□ 0.93
ACTN4-208ENST00000497637 CDH8P55286 799 aa20.89■□□□□ 0.93
ACTN4-208ENST00000497637 LMNB2Q03252 620 aa20.89■□□□□ 0.93
ACTN4-208ENST00000497637 C1QBPQ07021 282 aaKnown RBP20.89■□□□□ 0.93
ACTN4-208ENST00000497637 CFAP221Q4G0U5 840 aa20.89■□□□□ 0.93
ACTN4-208ENST00000497637 CCDC181Q5TID7 509 aa20.89■□□□□ 0.93
ACTN4-208ENST00000497637 MON1BQ7L1V2 547 aa20.89■□□□□ 0.93
ACTN4-208ENST00000497637 C1orf210Q8IVY1 113 aa20.89■□□□□ 0.93
ACTN4-208ENST00000497637 LRRC43Q8N309 656 aa20.89■□□□□ 0.93
ACTN4-208ENST00000497637 MMGT1Q8N4V1 131 aa20.89■□□□□ 0.93
ACTN4-208ENST00000497637 C12orf76Q8N812 135 aaPredicted RBP20.89■□□□□ 0.93
ACTN4-208ENST00000497637 SUMF1Q8NBK3 374 aa20.89■□□□□ 0.93
ACTN4-208ENST00000497637 MSANTD4Q8NCY6 345 aa20.89■□□□□ 0.93
ACTN4-208ENST00000497637 ZNF564Q8TBZ8 553 aaPredicted RBP20.89■□□□□ 0.93
ACTN4-208ENST00000497637 TFAP2BQ92481 460 aa20.89■□□□□ 0.93
ACTN4-208ENST00000497637 SELENOOQ9BVL4 669 aa20.89■□□□□ 0.93
ACTN4-208ENST00000497637 RNF39Q9H2S5 420 aa20.89■□□□□ 0.93
ACTN4-208ENST00000497637 GOLPH3Q9H4A6 298 aa20.89■□□□□ 0.93
ACTN4-208ENST00000497637 PARP2Q9UGN5 583 aa20.89■□□□□ 0.93
ACTN4-208ENST00000497637 CDV3Q9UKY7 258 aaKnown RBP20.89■□□□□ 0.93
ACTN4-208ENST00000497637 PACSIN2Q9UNF0 486 aaPredicted RBP20.89■□□□□ 0.93
ACTN4-208ENST00000497637 SMIM28A0A1B0GU29 152 aa20.88■□□□□ 0.93
ACTN4-208ENST00000497637 MED7O43513 233 aa20.88■□□□□ 0.93
ACTN4-208ENST00000497637 FGFR1P11362 822 aa20.88■□□□□ 0.93
ACTN4-208ENST00000497637 H2AFXP16104 143 aaPredicted RBP20.88■□□□□ 0.93
ACTN4-208ENST00000497637 AKAP5P24588 427 aa20.88■□□□□ 0.93
ACTN4-208ENST00000497637 BRD2P25440 801 aaKnown RBP20.88■□□□□ 0.93
ACTN4-208ENST00000497637 RAP1GAPP47736 663 aa20.88■□□□□ 0.93
ACTN4-208ENST00000497637 TNNC1P63316 161 aa20.88■□□□□ 0.93
ACTN4-208ENST00000497637 INCA1Q0VD86 236 aa20.88■□□□□ 0.93
ACTN4-208ENST00000497637 TWF2Q6IBS0 349 aaKnown RBP20.88■□□□□ 0.93
ACTN4-208ENST00000497637 ABI1Q8IZP0 508 aa20.88■□□□□ 0.93
ACTN4-208ENST00000497637 NOA1Q8NC60 698 aaKnown RBP20.88■□□□□ 0.93
ACTN4-208ENST00000497637 TMEM35BQ8NCS4 154 aa20.88■□□□□ 0.93
ACTN4-208ENST00000497637 PSMB7Q99436 277 aa20.88■□□□□ 0.93
ACTN4-208ENST00000497637 RTKNQ9BST9 563 aa20.88■□□□□ 0.93
ACTN4-208ENST00000497637 APOL6Q9BWW8 343 aa20.88■□□□□ 0.93
ACTN4-208ENST00000497637 LHX5Q9H2C1 402 aa20.88■□□□□ 0.93
ACTN4-208ENST00000497637 NCDNQ9UBB6 729 aa20.88■□□□□ 0.93
ACTN4-208ENST00000497637 ALG6Q9Y672 507 aa20.88■□□□□ 0.93
ACTN4-208ENST00000497637 FAM208BQ5VWN6 2430 aa20.88■□□□□ 0.93
ACTN4-208ENST00000497637 KCNK3O14649 394 aa20.87■□□□□ 0.93
ACTN4-208ENST00000497637 DDX3YO15523 660 aaKnown RBP20.87■□□□□ 0.93
ACTN4-208ENST00000497637 CXCL14O95715 111 aa20.87■□□□□ 0.93
ACTN4-208ENST00000497637 ZSCAN20P17040 1043 aaPredicted RBP20.87■□□□□ 0.93
ACTN4-208ENST00000497637 PTP4A2Q12974 167 aa20.87■□□□□ 0.93
ACTN4-208ENST00000497637 VARS2Q5ST30 1063 aaKnown RBP20.87■□□□□ 0.93
ACTN4-208ENST00000497637 C9orf57Q5W0N0 161 aa20.87■□□□□ 0.93
ACTN4-208ENST00000497637 SLC4A11Q8NBS3 891 aa20.87■□□□□ 0.93
ACTN4-208ENST00000497637 C18orf25Q96B23 403 aaPredicted RBP20.87■□□□□ 0.93
ACTN4-208ENST00000497637 TMEM176AQ96HP8 235 aa20.87■□□□□ 0.93
ACTN4-208ENST00000497637 ELOVL4Q9GZR5 314 aa20.87■□□□□ 0.93
ACTN4-208ENST00000497637 ADAM22Q9P0K1 906 aa20.87■□□□□ 0.93
ACTN4-208ENST00000497637 TUBGCP4Q9UGJ1 667 aa20.87■□□□□ 0.93
ACTN4-208ENST00000497637 KIAA1257Q9ULG3 409 aa20.87■□□□□ 0.93
ACTN4-208ENST00000497637 SIT1Q9Y3P8 196 aa20.87■□□□□ 0.93
ACTN4-208ENST00000497637 FNDC1Q4ZHG4 1894 aaPredicted RBP20.87■□□□□ 0.93
ACTN4-208ENST00000497637 PKD1L2Q7Z442 2459 aa20.87■□□□□ 0.93
ACTN4-208ENST00000497637 FAM170AA1A519 330 aa20.86■□□□□ 0.93
ACTN4-208ENST00000497637 CARNS1A5YM72 827 aa20.86■□□□□ 0.93
ACTN4-208ENST00000497637 MIF4GDA9UHW6 222 aaKnown RBP20.86■□□□□ 0.93
ACTN4-208ENST00000497637 PIRO00625 290 aa20.86■□□□□ 0.93
ACTN4-208ENST00000497637 ATMINO43313 823 aaPredicted RBP20.86■□□□□ 0.93
ACTN4-208ENST00000497637 TUBBP07437 444 aa20.86■□□□□ 0.93
ACTN4-208ENST00000497637 CA8P35219 290 aa20.86■□□□□ 0.93
ACTN4-208ENST00000497637 ZNF394Q53GI3 561 aa20.86■□□□□ 0.93
ACTN4-208ENST00000497637 GPR149Q86SP6 731 aa20.86■□□□□ 0.93
ACTN4-208ENST00000497637 PASD1Q8IV76 773 aa20.86■□□□□ 0.93
ACTN4-208ENST00000497637 HACE1Q8IYU2 909 aa20.86■□□□□ 0.93
ACTN4-208ENST00000497637 SPATA4Q8NEY3 305 aa20.86■□□□□ 0.93
ACTN4-208ENST00000497637 ACTRT1Q8TDG2 376 aa20.86■□□□□ 0.93
ACTN4-208ENST00000497637 CASD1Q96PB1 797 aa20.86■□□□□ 0.93
ACTN4-208ENST00000497637 PARD6BQ9BYG5 372 aa20.86■□□□□ 0.93
ACTN4-208ENST00000497637 SFXN1Q9H9B4 322 aa20.86■□□□□ 0.93
ACTN4-208ENST00000497637 TBC1D17Q9HA65 648 aa20.86■□□□□ 0.93
ACTN4-208ENST00000497637 KLK14Q9P0G3 267 aa20.86■□□□□ 0.93
ACTN4-208ENST00000497637 IRAK3Q9Y616 596 aa20.86■□□□□ 0.93
ACTN4-208ENST00000497637 KRBA1A5PL33 1030 aa20.85■□□□□ 0.93
ACTN4-208ENST00000497637 SPTLC1O15269 473 aa20.85■□□□□ 0.93
ACTN4-208ENST00000497637 CALB1P05937 261 aa20.85■□□□□ 0.93
ACTN4-208ENST00000497637 ADRB1P08588 477 aa20.85■□□□□ 0.93
ACTN4-208ENST00000497637 VDRP11473 427 aa20.85■□□□□ 0.93
ACTN4-208ENST00000497637 CD19P15391 556 aa20.85■□□□□ 0.93
ACTN4-208ENST00000497637 MMP8P22894 467 aa20.85■□□□□ 0.93
ACTN4-208ENST00000497637 RRM1P23921 792 aa20.85■□□□□ 0.93
ACTN4-208ENST00000497637 ALDH7A1P49419 539 aaKnown RBP20.85■□□□□ 0.93
ACTN4-208ENST00000497637 DNA2P51530 1060 aa20.85■□□□□ 0.93
ACTN4-208ENST00000497637 MESDQ14696 234 aa20.85■□□□□ 0.93
ACTN4-208ENST00000497637 PLEKHA7Q6IQ23 1121 aa20.85■□□□□ 0.93
ACTN4-208ENST00000497637 TMC5Q6UXY8 1006 aa20.85■□□□□ 0.93
ACTN4-208ENST00000497637 MTERF4Q7Z6M4 381 aaKnown RBP20.85■□□□□ 0.93
ACTN4-208ENST00000497637 MRPL10Q7Z7H8 261 aaKnown RBP20.85■□□□□ 0.93
ACTN4-208ENST00000497637 RASGEF1CQ8N431 466 aa20.85■□□□□ 0.93
ACTN4-208ENST00000497637 NXPE3Q969Y0 559 aa20.85■□□□□ 0.93
ACTN4-208ENST00000497637 MS4A14Q96JA4 679 aa20.85■□□□□ 0.93
ACTN4-208ENST00000497637 TWNKQ96RR1 684 aa20.85■□□□□ 0.93
ACTN4-208ENST00000497637 C11orf70Q9BRQ4 267 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms