RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 SFT2D3Q587I9 215 aa16.03■□□□□ 0.16
SDF4-207ENST00000494748 FAM182AQ5T1J6 154 aa16.03■□□□□ 0.16
SDF4-207ENST00000494748 ZFYVE27Q5T4F4 411 aa16.03■□□□□ 0.16
SDF4-207ENST00000494748 POLNQ7Z5Q5 900 aa16.03■□□□□ 0.16
SDF4-207ENST00000494748 PPP2R3CQ969Q6 453 aa16.03■□□□□ 0.16
SDF4-207ENST00000494748 PLLPQ9Y342 182 aa16.03■□□□□ 0.16
SDF4-207ENST00000494748 PARP14Q460N5 1801 aa16.03■□□□□ 0.16
SDF4-207ENST00000494748 PSME4Q14997 1843 aa16.02■□□□□ 0.16
SDF4-207ENST00000494748 PRR5-ARHGAP8B1AHC4 643 aa16.02■□□□□ 0.16
SDF4-207ENST00000494748 ICAM1P05362 532 aa16.02■□□□□ 0.16
SDF4-207ENST00000494748 ACOT2P49753 483 aa16.02■□□□□ 0.16
SDF4-207ENST00000494748 ARHGAP8P85298 464 aa16.02■□□□□ 0.16
SDF4-207ENST00000494748 ZNF200P98182 395 aaPredicted RBP16.02■□□□□ 0.16
SDF4-207ENST00000494748 KDSRQ06136 332 aa16.02■□□□□ 0.16
SDF4-207ENST00000494748 CDK18Q07002 472 aa16.02■□□□□ 0.16
SDF4-207ENST00000494748 ARHGAP18Q8N392 663 aa16.02■□□□□ 0.16
SDF4-207ENST00000494748 FAM172AQ8WUF8 416 aa16.02■□□□□ 0.16
SDF4-207ENST00000494748 PNPLA8Q9NP80 782 aa16.02■□□□□ 0.16
SDF4-207ENST00000494748 CXorf49A8MYA2 514 aaPredicted RBP16.02■□□□□ 0.16
SDF4-207ENST00000494748 CST8O60676 142 aa16.02■□□□□ 0.16
SDF4-207ENST00000494748 PABPC4LP0CB38 370 aaKnown RBP16.02■□□□□ 0.16
SDF4-207ENST00000494748 AP2B1P63010 937 aa16.02■□□□□ 0.16
SDF4-207ENST00000494748 PIGHQ14442 188 aaPredicted RBP16.02■□□□□ 0.16
SDF4-207ENST00000494748 KCNJ11Q14654 390 aa16.02■□□□□ 0.16
SDF4-207ENST00000494748 SMTNL2Q2TAL5 461 aa16.02■□□□□ 0.16
SDF4-207ENST00000494748 MARK2Q7KZI7 788 aaKnown RBP16.02■□□□□ 0.16
SDF4-207ENST00000494748 PRMT6Q96LA8 375 aaPredicted RBP16.02■□□□□ 0.16
SDF4-207ENST00000494748 TTC1Q99614 292 aa16.02■□□□□ 0.16
SDF4-207ENST00000494748 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.02■□□□□ 0.16
SDF4-207ENST00000494748 CYB561D2O14569 222 aa16.02■□□□□ 0.15
SDF4-207ENST00000494748 RFPL1O75677 317 aa16.02■□□□□ 0.15
SDF4-207ENST00000494748 TNNI1P19237 187 aa16.02■□□□□ 0.15
SDF4-207ENST00000494748 ZYXQ15942 572 aaKnown RBP16.02■□□□□ 0.15
SDF4-207ENST00000494748 ARID3BQ8IVW6 561 aaPredicted RBP16.02■□□□□ 0.15
SDF4-207ENST00000494748 OR5B17Q8NGF7 314 aa16.02■□□□□ 0.15
SDF4-207ENST00000494748 S100A14Q9HCY8 104 aa16.02■□□□□ 0.15
SDF4-207ENST00000494748 PPARGC1AQ9UBK2 798 aaKnown RBP16.02■□□□□ 0.15
SDF4-207ENST00000494748 CNTNAP2Q9UHC6 1331 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 ETS2P15036 469 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 UBAP2LQ14157 1087 aaKnown RBP16.01■□□□□ 0.15
SDF4-207ENST00000494748 DPYSL3Q14195 570 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 PPP1R2P3Q6NXS1 205 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 DNAJC24Q6P3W2 148 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 PDIK1LQ8N165 341 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 GSTCDQ8NEC7 633 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 SYTL5Q8TDW5 730 aaPredicted RBP16.01■□□□□ 0.15
SDF4-207ENST00000494748 EBF4Q9BQW3 602 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 IL1RAPL1Q9NZN1 696 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 AVILO75366 819 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 LRCH4O75427 683 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 CALB1P05937 261 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 CAP2P40123 477 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 PGM5Q15124 567 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 KCNT1Q5JUK3 1230 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 FAM160B2Q86V87 743 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 FAM71DQ8N9W8 422 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 SMC1BQ8NDV3 1235 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 OR6Y1Q8NGX8 325 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 FAM81AQ8TBF8 368 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 ZNF778Q96MU6 729 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 SMYD2Q9NRG4 433 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 ADAMTS6Q9UKP5 1117 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 CCPG1Q9ULG6 757 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 HBS1LQ9Y450 684 aaKnown RBP16.01■□□□□ 0.15
SDF4-207ENST00000494748 ANK1P16157 1881 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 SDR42E2A6NKP2 422 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 MEI4A8MW99 385 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 WDR64B1ANS9 1081 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 SORBS2O94875 1100 aaKnown RBP16.01■□□□□ 0.15
SDF4-207ENST00000494748 EDN1P05305 212 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 HARSP12081 509 aaKnown RBP16.01■□□□□ 0.15
SDF4-207ENST00000494748 CDH5P33151 784 aaPredicted RBP16.01■□□□□ 0.15
SDF4-207ENST00000494748 JAK3P52333 1124 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 DNAL1Q4LDG9 190 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 CYP4A22Q5TCH4 519 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 SAMD1Q6SPF0 538 aaPredicted RBP16.01■□□□□ 0.15
SDF4-207ENST00000494748 TAAR1Q96RJ0 339 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 FRMD8P1Q9BZ68 369 aaPredicted RBP16.01■□□□□ 0.15
SDF4-207ENST00000494748 MKS1Q9NXB0 559 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 HERC5Q9UII4 1024 aaKnown RBP16.01■□□□□ 0.15
SDF4-207ENST00000494748 PHF24Q9UPV7 400 aa16.01■□□□□ 0.15
SDF4-207ENST00000494748 HMX2A2RU54 273 aa16■□□□□ 0.15
SDF4-207ENST00000494748 TRIM49D1C9J1S8 452 aa16■□□□□ 0.15
SDF4-207ENST00000494748 SPECC1L-ADORA2AF8WAN1 911 aa16■□□□□ 0.15
SDF4-207ENST00000494748 KDELR1P24390 212 aa16■□□□□ 0.15
SDF4-207ENST00000494748 AQP5P55064 265 aa16■□□□□ 0.15
SDF4-207ENST00000494748 CCNIQ14094 377 aa16■□□□□ 0.15
SDF4-207ENST00000494748 C1orf146Q5VVC0 180 aa16■□□□□ 0.15
SDF4-207ENST00000494748 MTBPQ96DY7 904 aa16■□□□□ 0.15
SDF4-207ENST00000494748 ZWILCHQ9H900 591 aa16■□□□□ 0.15
SDF4-207ENST00000494748 TJP2Q9UDY2 1190 aa16■□□□□ 0.15
SDF4-207ENST00000494748 FEM1BQ9UK73 627 aa16■□□□□ 0.15
SDF4-207ENST00000494748 COMMD3-BMI1R4GMX3 469 aa16■□□□□ 0.15
SDF4-207ENST00000494748 GSRP00390 522 aa16■□□□□ 0.15
SDF4-207ENST00000494748 AOC1P19801 751 aa16■□□□□ 0.15
SDF4-207ENST00000494748 ANGEL2Q5VTE6 544 aaKnown RBP16■□□□□ 0.15
SDF4-207ENST00000494748 CC2D2BQ6DHV5 1058 aa16■□□□□ 0.15
SDF4-207ENST00000494748 AAGABQ6PD74 315 aa16■□□□□ 0.15
SDF4-207ENST00000494748 JOSD2Q8TAC2 188 aa16■□□□□ 0.15
SDF4-207ENST00000494748 ZBTB45Q96K62 511 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms