RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 EDRF1Q3B7T1 1238 aa13.4□□□□□ -0.26
HSPG2-212ENST00000493940 CBWD6Q4V339 395 aa13.4□□□□□ -0.26
HSPG2-212ENST00000493940 CBWD3Q5JTY5 395 aa13.4□□□□□ -0.26
HSPG2-212ENST00000493940 CBWD5Q5RIA9 395 aa13.4□□□□□ -0.26
HSPG2-212ENST00000493940 FSTL4Q6MZW2 842 aa13.4□□□□□ -0.26
HSPG2-212ENST00000493940 INTS8Q75QN2 995 aaKnown RBP13.4□□□□□ -0.26
HSPG2-212ENST00000493940 GPRIN1Q7Z2K8 1008 aa13.4□□□□□ -0.26
HSPG2-212ENST00000493940 SUMF1Q8NBK3 374 aa13.4□□□□□ -0.26
HSPG2-212ENST00000493940 SLC2A14Q8TDB8 520 aa13.4□□□□□ -0.26
HSPG2-212ENST00000493940 SH3RF2Q8TEC5 729 aa13.4□□□□□ -0.26
HSPG2-212ENST00000493940 ARID3AQ99856 593 aa13.4□□□□□ -0.26
HSPG2-212ENST00000493940 PRMT8Q9NR22 394 aaPredicted RBP13.4□□□□□ -0.26
HSPG2-212ENST00000493940 FAM49BQ9NUQ9 324 aa13.4□□□□□ -0.26
HSPG2-212ENST00000493940 IL37Q9NZH6 218 aa13.4□□□□□ -0.26
HSPG2-212ENST00000493940 CACNA1AO00555 2505 aa13.4□□□□□ -0.26
HSPG2-212ENST00000493940 ABCA7Q8IZY2 2146 aa13.39□□□□□ -0.27
HSPG2-212ENST00000493940 TRAV19A0A0A6YYK7 116 aa13.39□□□□□ -0.27
HSPG2-212ENST00000493940 GOLGA6L4A6NEF3 574 aa13.39□□□□□ -0.27
HSPG2-212ENST00000493940 SOBPA7XYQ1 873 aa13.39□□□□□ -0.27
HSPG2-212ENST00000493940 PPP1R3GB7ZBB8 358 aa13.39□□□□□ -0.27
HSPG2-212ENST00000493940 TRIM66O15016 1216 aa13.39□□□□□ -0.27
HSPG2-212ENST00000493940 LAMTOR5O43504 91 aa13.39□□□□□ -0.27
HSPG2-212ENST00000493940 OAS1P00973 400 aaKnown RBP13.39□□□□□ -0.27
HSPG2-212ENST00000493940 LMNAP02545 664 aaKnown RBP13.39□□□□□ -0.27
HSPG2-212ENST00000493940 USP17L7P0C7H9 530 aa13.39□□□□□ -0.27
HSPG2-212ENST00000493940 INCA1Q0VD86 236 aa13.39□□□□□ -0.27
HSPG2-212ENST00000493940 MTF1Q14872 753 aa13.39□□□□□ -0.27
HSPG2-212ENST00000493940 EML3Q32P44 896 aa13.39□□□□□ -0.27
HSPG2-212ENST00000493940 ITPRIPL2Q3MIP1 535 aa13.39□□□□□ -0.27
HSPG2-212ENST00000493940 RALGPS2Q86X27 583 aaPredicted RBP13.39□□□□□ -0.27
HSPG2-212ENST00000493940 NUP93Q8N1F7 819 aa13.39□□□□□ -0.27
HSPG2-212ENST00000493940 TAF4BQ92750 862 aa13.39□□□□□ -0.27
HSPG2-212ENST00000493940 SMARCE1Q969G3 411 aa13.39□□□□□ -0.27
HSPG2-212ENST00000493940 ZFRQ96KR1 1074 aaKnown RBP13.39□□□□□ -0.27
HSPG2-212ENST00000493940 MED10Q9BTT4 135 aa13.39□□□□□ -0.27
HSPG2-212ENST00000493940 C8orf33Q9H7E9 229 aaPredicted RBP13.39□□□□□ -0.27
HSPG2-212ENST00000493940 TMEM8AQ9HCN3 771 aa13.39□□□□□ -0.27
HSPG2-212ENST00000493940 MRPS17Q9Y2R5 130 aaKnown RBP13.39□□□□□ -0.27
HSPG2-212ENST00000493940 CEP250Q9BV73 2442 aa13.38□□□□□ -0.27
HSPG2-212ENST00000493940 LEFTY2O00292 366 aa13.38□□□□□ -0.27
HSPG2-212ENST00000493940 AP1G2O75843 785 aa13.38□□□□□ -0.27
HSPG2-212ENST00000493940 CLSTN1O94985 981 aa13.38□□□□□ -0.27
HSPG2-212ENST00000493940 KIF20AO95235 890 aa13.38□□□□□ -0.27
HSPG2-212ENST00000493940 OLFM2O95897 454 aa13.38□□□□□ -0.27
HSPG2-212ENST00000493940 ABL1P00519 1130 aa13.38□□□□□ -0.27
HSPG2-212ENST00000493940 CKMP06732 381 aa13.38□□□□□ -0.27
HSPG2-212ENST00000493940 KRT13P13646 458 aa13.38□□□□□ -0.27
HSPG2-212ENST00000493940 CD58P19256 250 aa13.38□□□□□ -0.27
HSPG2-212ENST00000493940 RPL13P26373 211 aaKnown RBP13.38□□□□□ -0.27
HSPG2-212ENST00000493940 ANXA13P27216 316 aa13.38□□□□□ -0.27
HSPG2-212ENST00000493940 GJA4P35212 333 aa13.38□□□□□ -0.27
HSPG2-212ENST00000493940 GALK1P51570 392 aa13.38□□□□□ -0.27
HSPG2-212ENST00000493940 MAP3K7CLP57077 242 aa13.38□□□□□ -0.27
HSPG2-212ENST00000493940 MESP2Q0VG99 397 aa13.38□□□□□ -0.27
HSPG2-212ENST00000493940 ZNF528Q3MIS6 628 aa13.38□□□□□ -0.27
HSPG2-212ENST00000493940 ZNF394Q53GI3 561 aa13.38□□□□□ -0.27
HSPG2-212ENST00000493940 DCLK2Q8N568 766 aa13.38□□□□□ -0.27
HSPG2-212ENST00000493940 ZBTB44Q8NCP5 570 aa13.38□□□□□ -0.27
HSPG2-212ENST00000493940 CEP295NLQ96MC4 621 aa13.38□□□□□ -0.27
HSPG2-212ENST00000493940 MED15Q96RN5 788 aa13.38□□□□□ -0.27
HSPG2-212ENST00000493940 CCSER2Q9H7U1 834 aa13.38□□□□□ -0.27
HSPG2-212ENST00000493940 CSNK1G1Q9HCP0 422 aa13.38□□□□□ -0.27
HSPG2-212ENST00000493940 KRT82Q9NSB4 513 aa13.38□□□□□ -0.27
HSPG2-212ENST00000493940 OSER1Q9NX31 292 aa13.38□□□□□ -0.27
HSPG2-212ENST00000493940 SMPD4Q9NXE4 827 aa13.38□□□□□ -0.27
HSPG2-212ENST00000493940 TRPM5Q9NZQ8 1165 aa13.38□□□□□ -0.27
HSPG2-212ENST00000493940 FBXO4Q9UKT5 387 aa13.38□□□□□ -0.27
HSPG2-212ENST00000493940 ARHGAP26Q9UNA1 814 aa13.38□□□□□ -0.27
HSPG2-212ENST00000493940 FAM92AA1XBS5 289 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 K7ESF4 209 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 BIN1O00499 593 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 CETN3O15182 167 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 NCAM2O15394 837 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 LILRB5O75023 590 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 CILPO75339 1184 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 EGFP01133 1207 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 ZDHHC11BP0C7U3 371 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 YWHAQP27348 245 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 ADORA2BP29275 332 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 SLC5A3P53794 718 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 PLCB2Q00722 1185 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 ENPEPQ07075 957 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 MORC3Q14149 939 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 TMEM196Q5HYL7 178 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 PPP1R26Q5T8A7 1209 aaPredicted RBP13.37□□□□□ -0.27
HSPG2-212ENST00000493940 KRT39Q6A163 491 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 MAMSTRQ6ZN01 415 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 CLEC20AQ6ZU45 233 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 UNC93AQ86WB7 457 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 SFTPA1Q8IWL2 248 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 ELOA2Q8IYF1 753 aaPredicted RBP13.37□□□□□ -0.27
HSPG2-212ENST00000493940 OSCP1Q8WVF1 389 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 CYFIP2Q96F07 1278 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 TNIP3Q96KP6 325 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 HNRNPABQ99729 332 aaKnown RBP13.37□□□□□ -0.27
HSPG2-212ENST00000493940 NIF3L1Q9GZT8 377 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 ECT2Q9H8V3 914 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 KIF9Q9HAQ2 790 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 RMND1Q9NWS8 449 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 THG1LQ9NWX6 298 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms