RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 SMARCB1Q12824 385 aa9.48□□□□□ -0.89
HDAC3-211ENST00000491581 TRPC3Q13507 836 aa9.48□□□□□ -0.89
HDAC3-211ENST00000491581 NCOA4Q13772 614 aa9.48□□□□□ -0.89
HDAC3-211ENST00000491581 KCNB1Q14721 858 aa9.48□□□□□ -0.89
HDAC3-211ENST00000491581 ZNF699Q32M78 642 aa9.48□□□□□ -0.89
HDAC3-211ENST00000491581 C2orf27AQ580R0 203 aa9.48□□□□□ -0.89
HDAC3-211ENST00000491581 CC2D1AQ6P1N0 951 aaPredicted RBP9.48□□□□□ -0.89
HDAC3-211ENST00000491581 C4orf50Q6ZRC1 276 aa9.48□□□□□ -0.89
HDAC3-211ENST00000491581 STXBP4Q6ZWJ1 553 aa9.48□□□□□ -0.89
HDAC3-211ENST00000491581 DPH6Q7L8W6 267 aa9.48□□□□□ -0.89
HDAC3-211ENST00000491581 FAM35AQ86V20 835 aa9.48□□□□□ -0.89
HDAC3-211ENST00000491581 CEP57L1Q8IYX8 460 aa9.48□□□□□ -0.89
HDAC3-211ENST00000491581 NAT16Q8N8M0 369 aa9.48□□□□□ -0.89
HDAC3-211ENST00000491581 FUBP3Q96I24 572 aaKnown RBP eCLIP9.48□□□□□ -0.89
HDAC3-211ENST00000491581 ZFRQ96KR1 1074 aaKnown RBP9.48□□□□□ -0.89
HDAC3-211ENST00000491581 SPATA32Q96LK8 384 aa9.48□□□□□ -0.89
HDAC3-211ENST00000491581 PHF12Q96QT6 1004 aa9.48□□□□□ -0.89
HDAC3-211ENST00000491581 SMOQ99835 787 aa9.48□□□□□ -0.89
HDAC3-211ENST00000491581 P2RY13Q9BPV8 354 aa9.48□□□□□ -0.89
HDAC3-211ENST00000491581 MED10Q9BTT4 135 aa9.48□□□□□ -0.89
HDAC3-211ENST00000491581 ARRDC1-AS1Q9H2J1 176 aa9.48□□□□□ -0.89
HDAC3-211ENST00000491581 EXOC1Q9NV70 894 aa9.48□□□□□ -0.89
HDAC3-211ENST00000491581 OSER1Q9NX31 292 aa9.48□□□□□ -0.89
HDAC3-211ENST00000491581 GMIPQ9P107 970 aa9.48□□□□□ -0.89
HDAC3-211ENST00000491581 CFAP97Q9P2B7 532 aa9.48□□□□□ -0.89
HDAC3-211ENST00000491581 R3HCC1Q9Y3T6 440 aaKnown RBP9.48□□□□□ -0.89
HDAC3-211ENST00000491581 UBE4BO95155 1302 aa9.48□□□□□ -0.89
HDAC3-211ENST00000491581 ADAMTS9Q9P2N4 1935 aa9.48□□□□□ -0.89
HDAC3-211ENST00000491581 GVINP1Q7Z2Y8 2422 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 TNRC6BQ9UPQ9 1833 aaKnown RBP9.47□□□□□ -0.89
HDAC3-211ENST00000491581 PTPRZ1P23471 2315 aaPredicted RBP9.47□□□□□ -0.89
HDAC3-211ENST00000491581 PVALEFA0A1B0GWK0 134 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 TNFRSF10BO14763 440 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 KIAA0391O15091 583 aaKnown RBP9.47□□□□□ -0.89
HDAC3-211ENST00000491581 COCHO43405 550 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 TACC1O75410 805 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 AKAP3O75969 853 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 OAS1P00973 400 aaKnown RBP9.47□□□□□ -0.89
HDAC3-211ENST00000491581 CALCAP01258 141 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 HLA-DRAP01903 254 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 CHRM1P11229 460 aaPredicted RBP9.47□□□□□ -0.89
HDAC3-211ENST00000491581 PDIA4P13667 645 aaKnown RBP9.47□□□□□ -0.89
HDAC3-211ENST00000491581 BCKDHBP21953 392 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 DDX6P26196 483 aaKnown RBP eCLIP9.47□□□□□ -0.89
HDAC3-211ENST00000491581 ANXA13P27216 316 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 ADORA2BP29275 332 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 ASPAP45381 313 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 GCLMP48507 274 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 NDST1P52848 882 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 MLLT6P55198 1093 aaPredicted RBP9.47□□□□□ -0.89
HDAC3-211ENST00000491581 MAP3K7CLP57077 242 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 PLCB2Q00722 1185 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 DPYDQ12882 1025 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 SURF1Q15526 300 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 DGKKQ5KSL6 1271 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 ISM2Q6H9L7 571 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 TMEM92Q6UXU6 159 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 CEP68Q76N32 757 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 SV2AQ7L0J3 742 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.47□□□□□ -0.89
HDAC3-211ENST00000491581 LONP2Q86WA8 852 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 TTC30AQ86WT1 665 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 C12orf56Q8IXR9 622 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 FSIP1Q8NA03 581 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 SLC2A14Q8TDB8 520 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 TAS1R2Q8TE23 839 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 SEMA4DQ92854 862 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 CD101Q93033 1021 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 SPATA17Q96L03 361 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 TTLL2Q9BWV7 592 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 LRRC27Q9C0I9 530 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 KIAA1586Q9HCI6 787 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 KRT82Q9NSB4 513 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 SEMA4GQ9NTN9 838 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 HCN2Q9UL51 889 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 ARHGAP26Q9UNA1 814 aa9.47□□□□□ -0.89
HDAC3-211ENST00000491581 RIF1Q5UIP0 2472 aaKnown RBP9.47□□□□□ -0.89
HDAC3-211ENST00000491581 EP300Q09472 2414 aaPredicted RBP9.46□□□□□ -0.89
HDAC3-211ENST00000491581 AP1G2O75843 785 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 OLFM2O95897 454 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 MBL2P11226 248 aaPredicted RBP9.46□□□□□ -0.9
HDAC3-211ENST00000491581 CD58P19256 250 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 CMA1P23946 247 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 PIK3CAP42336 1068 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 WASP42768 502 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 SYKP43405 635 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 SLC5A3P53794 718 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 NOP14P78316 857 aaKnown RBP9.46□□□□□ -0.9
HDAC3-211ENST00000491581 CLDN10P78369 228 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 GRSF1Q12849 480 aaKnown RBP eCLIP9.46□□□□□ -0.9
HDAC3-211ENST00000491581 PNOCQ13519 176 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 DMC1Q14565 340 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 ZNF268Q14587 947 aaPredicted RBP9.46□□□□□ -0.9
HDAC3-211ENST00000491581 PDGFRLQ15198 375 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 ZACNQ401N2 412 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 ZNF394Q53GI3 561 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 ZNF667Q5HYK9 610 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 LAIR1Q6GTX8 287 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 RHBDF2Q6PJF5 856 aa9.46□□□□□ -0.9
HDAC3-211ENST00000491581 VSTM1Q6UX27 236 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms