RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 EPN1Q9Y6I3 576 aaPredicted RBP2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 N4BP2Q86UW6 1770 aaPredicted RBP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 SETD1AO15047 1707 aaKnown RBP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 ADCY9O60503 1353 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 RFX7Q2KHR2 1363 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 TNRQ92752 1358 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 PHLPP2Q6ZVD8 1323 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 A0A0D9SFI3 127 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 A0A1B0GVL5 298 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 CDHR4A6H8M9 788 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 EYA2O00167 538 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 TOR1BO14657 336 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 XPOTO43592 962 aaKnown RBP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 TMEM127O75204 238 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 GPR32O75388 356 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 URI1O94763 535 aaPredicted RBP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 ZRANB2O95218 330 aaKnown RBP eCLIP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 C1RP00736 705 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 SERPINC1P01008 464 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 CFIP05156 583 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 RPLP2P05387 115 aaKnown RBP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 CSF1RP07333 972 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 TOP1P11387 765 aaKnown RBP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 H2AFXP16104 143 aaPredicted RBP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 ZNF37AP17032 561 aaPredicted RBP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 BPIP17213 487 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 DDCP20711 480 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 FGFR4P22455 802 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 PROZP22891 400 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 SFPQP23246 707 aaKnown RBP eCLIP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 MCM3P25205 808 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 HSD3B2P26439 372 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 SREBF1P36956 1147 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 IARSP41252 1262 aaKnown RBP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 LIFRP42702 1097 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 SYKP43405 635 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 ALDH1A3P47895 512 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 PIP4K2AP48426 406 aaPredicted RBP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 MASP1P48740 699 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 NDUFA8P51970 172 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 CXADRP78310 365 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 CCZ1BP86790 482 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 CCZ1P86791 482 aaPredicted RBP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 CEBPZQ03701 1054 aaKnown RBP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 ZNF844Q08AG5 666 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 NCBP1Q09161 790 aaKnown RBP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 ST3GAL1Q11201 340 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 MALLQ13021 153 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 TBX2Q13207 712 aaPredicted RBP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 TRIM29Q14134 588 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 STAT4Q14765 748 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 BRD3Q15059 726 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 SAFBQ15424 915 aaKnown RBP eCLIP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 ADRM1Q16186 407 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 CCDC57Q2TAC2 916 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 MUM1Q2TAK8 710 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 FILIP1LQ4L180 1135 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 RILPL1Q5EBL4 403 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 TRIM65Q6PJ69 517 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 SLC30A10Q6XR72 485 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 SYT10Q6XYQ8 523 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 Q6ZNX1 250 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 Q6ZPA2 131 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 Q6ZVL8 140 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 RHOUQ7L0Q8 258 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 MIGA2Q7L4E1 593 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 ATG9AQ7Z3C6 839 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 ZNF572Q7Z3I7 529 aaPredicted RBP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 KIAA0907Q7Z7F0 614 aaPredicted RBP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 GPR149Q86SP6 731 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 PNMA8AQ86V59 439 aaPredicted RBP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 THNSL2Q86YJ6 484 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 TMTC1Q8IUR5 882 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 LYSMD2Q8IV50 215 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 FOXP4Q8IVH2 680 aaPredicted RBP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 TTC5Q8N0Z6 440 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 C17orf53Q8N3J3 647 aaPredicted RBP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 TXLNBQ8N3L3 684 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 CEP112Q8N8E3 955 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 SLC17A8Q8NDX2 589 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 MNS1Q8NEH6 495 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 ACTRT2Q8TDY3 377 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 LMBR1Q8WVP7 490 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 RAPGEF4Q8WZA2 1011 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 TMEM125Q96AQ2 219 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 CCDC51Q96ER9 411 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 C16orf45Q96MC5 204 aaPredicted RBP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 COQ10AQ96MF6 247 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 SEC62Q99442 399 aaKnown RBP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 MYD88Q99836 296 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 PYM1Q9BRP8 204 aaKnown RBP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 UTP14AQ9BVJ6 771 aaKnown RBP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 NAA15Q9BXJ9 866 aaKnown RBP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 XPO4Q9C0E2 1151 aaKnown RBP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 ARFGAP3Q9NP61 516 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 VTA1Q9NP79 307 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 SLAMF7Q9NQ25 335 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 MAN1C1Q9NR34 630 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 TDP1Q9NUW8 608 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms