RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 SPACA7Q96KW9 195 aa9.98□□□□□ -0.81
SNX17-207ENST00000489402 CNOT6LQ96LI5 555 aaKnown RBP9.98□□□□□ -0.81
SNX17-207ENST00000489402 C8orf48Q96LL4 319 aa9.98□□□□□ -0.81
SNX17-207ENST00000489402 ELOVL4Q9GZR5 314 aa9.98□□□□□ -0.81
SNX17-207ENST00000489402 MMP17Q9ULZ9 603 aa9.98□□□□□ -0.81
SNX17-207ENST00000489402 INVSQ9Y283 1065 aa9.98□□□□□ -0.81
SNX17-207ENST00000489402 CPQQ9Y646 472 aa9.98□□□□□ -0.81
SNX17-207ENST00000489402 NUP205Q92621 2012 aa9.98□□□□□ -0.81
SNX17-207ENST00000489402 AKAP13Q12802 2813 aa9.98□□□□□ -0.81
SNX17-207ENST00000489402 ZNF840PA6NDX5 716 aa9.97□□□□□ -0.81
SNX17-207ENST00000489402 C4orf47A7E2U8 309 aa9.97□□□□□ -0.81
SNX17-207ENST00000489402 K7EQS6 105 aa9.97□□□□□ -0.81
SNX17-207ENST00000489402 KHNYNO15037 678 aaKnown RBP9.97□□□□□ -0.81
SNX17-207ENST00000489402 TACC1O75410 805 aa9.97□□□□□ -0.81
SNX17-207ENST00000489402 CLSTN1O94985 981 aa9.97□□□□□ -0.81
SNX17-207ENST00000489402 RTN3O95197 1032 aaPredicted RBP9.97□□□□□ -0.81
SNX17-207ENST00000489402 ADH1CP00326 375 aa9.97□□□□□ -0.81
SNX17-207ENST00000489402 OAS1P00973 400 aaKnown RBP9.97□□□□□ -0.81
SNX17-207ENST00000489402 APODP05090 189 aa9.97□□□□□ -0.81
SNX17-207ENST00000489402 FAM163BP0C2L3 166 aa9.97□□□□□ -0.81
SNX17-207ENST00000489402 MBL2P11226 248 aaPredicted RBP9.97□□□□□ -0.81
SNX17-207ENST00000489402 PTPN1P18031 435 aaKnown RBP9.97□□□□□ -0.81
SNX17-207ENST00000489402 CASP1P29466 404 aa9.97□□□□□ -0.81
SNX17-207ENST00000489402 EIF2DP41214 584 aaKnown RBP9.97□□□□□ -0.81
SNX17-207ENST00000489402 DHPSP49366 369 aaPredicted RBP9.97□□□□□ -0.81
SNX17-207ENST00000489402 CACNA2D1P54289 1103 aa9.97□□□□□ -0.81
SNX17-207ENST00000489402 IFRD2Q12894 506 aaPredicted RBP9.97□□□□□ -0.81
SNX17-207ENST00000489402 TRPC3Q13507 836 aa9.97□□□□□ -0.81
SNX17-207ENST00000489402 CRY1Q16526 586 aa9.97□□□□□ -0.81
SNX17-207ENST00000489402 WDR72Q3MJ13 1102 aa9.97□□□□□ -0.81
SNX17-207ENST00000489402 HSF5Q4G112 596 aaPredicted RBP9.97□□□□□ -0.81
SNX17-207ENST00000489402 FAM26FQ5R3K3 315 aa9.97□□□□□ -0.81
SNX17-207ENST00000489402 PSAPL1Q6NUJ1 521 aa9.97□□□□□ -0.81
SNX17-207ENST00000489402 RASSF3Q86WH2 238 aa9.97□□□□□ -0.81
SNX17-207ENST00000489402 CCDC33Q8N5R6 958 aa9.97□□□□□ -0.81
SNX17-207ENST00000489402 RDH13Q8NBN7 331 aa9.97□□□□□ -0.81
SNX17-207ENST00000489402 PDZD8Q8NEN9 1154 aa9.97□□□□□ -0.81
SNX17-207ENST00000489402 PNKPQ96T60 521 aa9.97□□□□□ -0.81
SNX17-207ENST00000489402 CGRRF1Q99675 332 aa9.97□□□□□ -0.81
SNX17-207ENST00000489402 MRPL45Q9BRJ2 306 aaKnown RBP9.97□□□□□ -0.81
SNX17-207ENST00000489402 TRIM9Q9C026 710 aa9.97□□□□□ -0.81
SNX17-207ENST00000489402 POLMQ9NP87 494 aaPredicted RBP9.97□□□□□ -0.81
SNX17-207ENST00000489402 TMEM30AQ9NV96 361 aa9.97□□□□□ -0.81
SNX17-207ENST00000489402 SMPD4Q9NXE4 827 aa9.97□□□□□ -0.81
SNX17-207ENST00000489402 BCCIPQ9P287 314 aaKnown RBP eCLIP9.97□□□□□ -0.81
SNX17-207ENST00000489402 CFAP97Q9P2B7 532 aa9.97□□□□□ -0.81
SNX17-207ENST00000489402 TBC1D14Q9P2M4 693 aa9.97□□□□□ -0.81
SNX17-207ENST00000489402 CIZ1Q9ULV3 898 aaPredicted RBP9.97□□□□□ -0.81
SNX17-207ENST00000489402 ATP8B3O60423 1300 aa9.97□□□□□ -0.81
SNX17-207ENST00000489402 UBE4BO95155 1302 aa9.97□□□□□ -0.81
SNX17-207ENST00000489402 TPRP12270 2363 aaKnown RBP9.96□□□□□ -0.81
SNX17-207ENST00000489402 LNP1A1A4G5 178 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 A8MXQ7 604 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.96□□□□□ -0.82
SNX17-207ENST00000489402 SPTLC2O15270 562 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 MAP3K13O43283 966 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 PHACTR2O75167 634 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 KAT7O95251 611 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 OLFM2O95897 454 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 ADH5P11766 374 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 YWHAQP27348 245 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 ATICP31939 592 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 TIE1P35590 1138 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 NASPP49321 788 aaPredicted RBP9.96□□□□□ -0.82
SNX17-207ENST00000489402 CYP2J2P51589 502 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 SNRPFP62306 86 aaKnown RBP9.96□□□□□ -0.82
SNX17-207ENST00000489402 CYP24A1Q07973 514 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 TAF10Q12962 218 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 PSMD6Q15008 389 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 DHCR24Q15392 516 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 GAB4Q2WGN9 574 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 EOGTQ5NDL2 527 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 LPCAT2Q7L5N7 544 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 ADGRG2Q8IZP9 1017 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 NUP93Q8N1F7 819 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 IQUBQ8NA54 791 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 XXYLT1Q8NBI6 393 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 TXNDC5Q8NBS9 432 aaKnown RBP9.96□□□□□ -0.82
SNX17-207ENST00000489402 LINC00301Q8NCQ3 95 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 B3GALNT2Q8NCR0 500 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 MDGA1Q8NFP4 955 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 ZNF507Q8TCN5 953 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 WHAMMQ8TF30 809 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 OVCA2Q8WZ82 227 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 FBXO32Q969P5 355 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 SYAP1Q96A49 352 aaPredicted RBP9.96□□□□□ -0.82
SNX17-207ENST00000489402 CCDC127Q96BQ5 260 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 DHX58Q96C10 678 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 OTUB2Q96DC9 234 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 INTS4Q96HW7 963 aaKnown RBP9.96□□□□□ -0.82
SNX17-207ENST00000489402 ZNF396Q96N95 335 aaPredicted RBP9.96□□□□□ -0.82
SNX17-207ENST00000489402 ZNF518BQ9C0D4 1074 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 RNF38Q9H0F5 515 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 GZF1Q9H116 711 aaPredicted RBP9.96□□□□□ -0.82
SNX17-207ENST00000489402 TMEM9BQ9NQ34 198 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 AGPAT3Q9NRZ7 376 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 KBTBD4Q9NVX7 518 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 NXF1Q9UBU9 619 aaKnown RBP9.96□□□□□ -0.82
SNX17-207ENST00000489402 MTMR6Q9Y217 621 aa9.96□□□□□ -0.82
SNX17-207ENST00000489402 USP24Q9UPU5 2620 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms