RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 TMEM196Q5HYL7 178 aa24.44■■□□□ 1.5
COL9A3-213ENST00000489045 FSTL4Q6MZW2 842 aa24.44■■□□□ 1.5
COL9A3-213ENST00000489045 PAQR9Q6ZVX9 377 aa24.44■■□□□ 1.5
COL9A3-213ENST00000489045 SYNPOQ8N3V7 929 aa24.44■■□□□ 1.5
COL9A3-213ENST00000489045 SLITRK1Q96PX8 696 aa24.44■■□□□ 1.5
COL9A3-213ENST00000489045 KCNK16Q96T55 309 aa24.44■■□□□ 1.5
COL9A3-213ENST00000489045 EPC1Q9H2F5 836 aa24.44■■□□□ 1.5
COL9A3-213ENST00000489045 ECT2Q9H8V3 914 aa24.44■■□□□ 1.5
COL9A3-213ENST00000489045 SMG5Q9UPR3 1016 aaKnown RBP24.44■■□□□ 1.5
COL9A3-213ENST00000489045 GOLGA6L4A6NEF3 574 aa24.43■■□□□ 1.5
COL9A3-213ENST00000489045 TRDMT1O14717 391 aaKnown RBP24.43■■□□□ 1.5
COL9A3-213ENST00000489045 ABL1P00519 1130 aa24.43■■□□□ 1.5
COL9A3-213ENST00000489045 ZXDBP98169 803 aa24.43■■□□□ 1.5
COL9A3-213ENST00000489045 PPP3CAQ08209 521 aa24.43■■□□□ 1.5
COL9A3-213ENST00000489045 GRSF1Q12849 480 aaKnown RBP eCLIP24.43■■□□□ 1.52e-6■□□□□ 10.4
COL9A3-213ENST00000489045 EML3Q32P44 896 aa24.43■■□□□ 1.5
COL9A3-213ENST00000489045 FUKQ8N0W3 1084 aa24.43■■□□□ 1.5
COL9A3-213ENST00000489045 NUP93Q8N1F7 819 aa24.43■■□□□ 1.5
COL9A3-213ENST00000489045 DCLK2Q8N568 766 aa24.43■■□□□ 1.5
COL9A3-213ENST00000489045 ATP2A3Q93084 1043 aa24.43■■□□□ 1.5
COL9A3-213ENST00000489045 SMARCD1Q96GM5 515 aa24.43■■□□□ 1.5
COL9A3-213ENST00000489045 MMRN2Q9H8L6 949 aa24.43■■□□□ 1.5
COL9A3-213ENST00000489045 DMAP1Q9NPF5 467 aaPredicted RBP24.43■■□□□ 1.5
COL9A3-213ENST00000489045 C2orf42Q9NWW7 574 aa24.43■■□□□ 1.5
COL9A3-213ENST00000489045 RTN3O95197 1032 aaPredicted RBP24.42■■□□□ 1.5
COL9A3-213ENST00000489045 PAPSS2O95340 614 aaPredicted RBP24.42■■□□□ 1.5
COL9A3-213ENST00000489045 CCDC130P13994 396 aa24.42■■□□□ 1.5
COL9A3-213ENST00000489045 YWHAQP27348 245 aa24.42■■□□□ 1.5
COL9A3-213ENST00000489045 GJA4P35212 333 aa24.42■■□□□ 1.5
COL9A3-213ENST00000489045 AMPD2Q01433 879 aa24.42■■□□□ 1.5
COL9A3-213ENST00000489045 EDRF1Q3B7T1 1238 aa24.42■■□□□ 1.5
COL9A3-213ENST00000489045 NAIF1Q69YI7 327 aaPredicted RBP24.42■■□□□ 1.5
COL9A3-213ENST00000489045 TAS1R2Q8TE23 839 aa24.42■■□□□ 1.5
COL9A3-213ENST00000489045 FBXO32Q969P5 355 aa24.42■■□□□ 1.5
COL9A3-213ENST00000489045 IMPG2Q9BZV3 1241 aa24.42■■□□□ 1.5
COL9A3-213ENST00000489045 RNF38Q9H0F5 515 aa24.42■■□□□ 1.5
COL9A3-213ENST00000489045 KRT82Q9NSB4 513 aa24.42■■□□□ 1.5
COL9A3-213ENST00000489045 K7ESF4 209 aa24.41■■□□□ 1.5
COL9A3-213ENST00000489045 LEFTY2O00292 366 aa24.41■■□□□ 1.5
COL9A3-213ENST00000489045 AP1G2O75843 785 aa24.41■■□□□ 1.5
COL9A3-213ENST00000489045 OLFM2O95897 454 aa24.41■■□□□ 1.5
COL9A3-213ENST00000489045 OAS1P00973 400 aaKnown RBP24.41■■□□□ 1.5
COL9A3-213ENST00000489045 SLC5A3P53794 718 aa24.41■■□□□ 1.5
COL9A3-213ENST00000489045 SLC7A9P82251 487 aa24.41■■□□□ 1.5
COL9A3-213ENST00000489045 ENPEPQ07075 957 aa24.41■■□□□ 1.5
COL9A3-213ENST00000489045 DMWDQ09019 674 aa24.41■■□□□ 1.5
COL9A3-213ENST00000489045 PKN3Q6P5Z2 889 aa24.41■■□□□ 1.5
COL9A3-213ENST00000489045 UNC93AQ86WB7 457 aa24.41■■□□□ 1.5
COL9A3-213ENST00000489045 KIAA2013Q8IYS2 634 aa24.41■■□□□ 1.5
COL9A3-213ENST00000489045 CRYBG2Q8N1P7 616 aa24.41■■□□□ 1.5
COL9A3-213ENST00000489045 ENGASEQ8NFI3 743 aa24.41■■□□□ 1.5
COL9A3-213ENST00000489045 SCAMP5Q8TAC9 235 aa24.41■■□□□ 1.5
COL9A3-213ENST00000489045 EEF2KMTQ96G04 330 aa24.41■■□□□ 1.5
COL9A3-213ENST00000489045 LINC00597Q9H2U6 94 aa24.41■■□□□ 1.5
COL9A3-213ENST00000489045 APOBEC3GQ9HC16 384 aaKnown RBP24.41■■□□□ 1.5
COL9A3-213ENST00000489045 FBRSL1Q9HCM7 1045 aaKnown RBP24.41■■□□□ 1.5
COL9A3-213ENST00000489045 FAM49BQ9NUQ9 324 aa24.41■■□□□ 1.5
COL9A3-213ENST00000489045 RMND1Q9NWS8 449 aa24.41■■□□□ 1.5
COL9A3-213ENST00000489045 NCDNQ9UBB6 729 aa24.41■■□□□ 1.5
COL9A3-213ENST00000489045 CPQQ9Y646 472 aa24.41■■□□□ 1.5
COL9A3-213ENST00000489045 CHURC1-FNTBB4DL54 471 aa24.4■■□□□ 1.5
COL9A3-213ENST00000489045 TNFRSF10BO14763 440 aa24.4■■□□□ 1.5
COL9A3-213ENST00000489045 EGFP01133 1207 aa24.4■■□□□ 1.5
COL9A3-213ENST00000489045 FNTBP49356 437 aa24.4■■□□□ 1.5
COL9A3-213ENST00000489045 GALK1P51570 392 aa24.4■■□□□ 1.5
COL9A3-213ENST00000489045 PDZD8Q8NEN9 1154 aa24.4■■□□□ 1.5
COL9A3-213ENST00000489045 SLC2A14Q8TDB8 520 aa24.4■■□□□ 1.5
COL9A3-213ENST00000489045 P2RY13Q9BPV8 354 aa24.4■■□□□ 1.5
COL9A3-213ENST00000489045 TMEM8AQ9HCN3 771 aa24.4■■□□□ 1.5
COL9A3-213ENST00000489045 SMPD4Q9NXE4 827 aa24.4■■□□□ 1.5
COL9A3-213ENST00000489045 DMXL1Q9Y485 3027 aa24.39■■□□□ 1.5
COL9A3-213ENST00000489045 INCA1Q0VD86 236 aa24.39■■□□□ 1.49
COL9A3-213ENST00000489045 C12orf29Q8N999 325 aa24.39■■□□□ 1.49
COL9A3-213ENST00000489045 ZMIZ2Q8NF64 920 aa24.39■■□□□ 1.49
COL9A3-213ENST00000489045 OVCA2Q8WZ82 227 aa24.39■■□□□ 1.49
COL9A3-213ENST00000489045 TWNKQ96RR1 684 aa24.39■■□□□ 1.49
COL9A3-213ENST00000489045 SMOQ99835 787 aa24.39■■□□□ 1.49
COL9A3-213ENST00000489045 RNF40O75150 1001 aa24.38■■□□□ 1.49
COL9A3-213ENST00000489045 BEST1O76090 585 aa24.38■■□□□ 1.49
COL9A3-213ENST00000489045 NFATC1O95644 943 aa24.38■■□□□ 1.49
COL9A3-213ENST00000489045 DRD1P21728 446 aa24.38■■□□□ 1.49
COL9A3-213ENST00000489045 HOXC13P31276 330 aa24.38■■□□□ 1.49
COL9A3-213ENST00000489045 PRCPP42785 496 aa24.38■■□□□ 1.49
COL9A3-213ENST00000489045 NR1H3Q13133 447 aa24.38■■□□□ 1.49
COL9A3-213ENST00000489045 ZNF658Q5TYW1 1059 aaPredicted RBP24.38■■□□□ 1.49
COL9A3-213ENST00000489045 HEATR6Q6AI08 1181 aaKnown RBP24.38■■□□□ 1.49
COL9A3-213ENST00000489045 ERCC4Q92889 916 aaPredicted RBP24.38■■□□□ 1.49
COL9A3-213ENST00000489045 CD101Q93033 1021 aa24.38■■□□□ 1.49
COL9A3-213ENST00000489045 EXOC4Q96A65 974 aa24.38■■□□□ 1.49
COL9A3-213ENST00000489045 GSDMAQ96QA5 445 aa24.38■■□□□ 1.49
COL9A3-213ENST00000489045 NIF3L1Q9GZT8 377 aa24.38■■□□□ 1.49
COL9A3-213ENST00000489045 CYP3A43Q9HB55 503 aa24.38■■□□□ 1.49
COL9A3-213ENST00000489045 IL37Q9NZH6 218 aa24.38■■□□□ 1.49
COL9A3-213ENST00000489045 MYOFQ9NZM1 2061 aa24.38■■□□□ 1.49
COL9A3-213ENST00000489045 CETN3O15182 167 aa24.37■■□□□ 1.49
COL9A3-213ENST00000489045 EPB41P11171 864 aaKnown RBP24.37■■□□□ 1.49
COL9A3-213ENST00000489045 MBL2P11226 248 aaPredicted RBP24.37■■□□□ 1.49
COL9A3-213ENST00000489045 ADORA2BP29275 332 aa24.37■■□□□ 1.49
COL9A3-213ENST00000489045 MAP3K7CLP57077 242 aa24.37■■□□□ 1.49
COL9A3-213ENST00000489045 MCCD1P59942 119 aaPredicted RBP24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms