RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 PELI3Q8N2H9 469 aa3.54□□□□□ -1.84
CCDC93-209ENST00000488908 RSPRY1Q96DX4 576 aa3.54□□□□□ -1.84
CCDC93-209ENST00000488908 FAM167AQ96KS9 214 aa3.54□□□□□ -1.84
CCDC93-209ENST00000488908 CAMK1GQ96NX5 476 aa3.54□□□□□ -1.84
CCDC93-209ENST00000488908 PRR25Q96S07 402 aa3.54□□□□□ -1.84
CCDC93-209ENST00000488908 ZPBPQ9BS86 351 aa3.54□□□□□ -1.84
CCDC93-209ENST00000488908 MLXIPQ9HAP2 919 aa3.54□□□□□ -1.84
CCDC93-209ENST00000488908 PLEKHM1Q9Y4G2 1056 aa3.54□□□□□ -1.84
CCDC93-209ENST00000488908 TCF20Q9UGU0 1960 aaKnown RBP3.53□□□□□ -1.84
CCDC93-209ENST00000488908 hCG_1984214I3L0E3 225 aa3.53□□□□□ -1.84
CCDC93-209ENST00000488908 UNC5CO95185 931 aa3.53□□□□□ -1.84
CCDC93-209ENST00000488908 CSF1RP07333 972 aa3.53□□□□□ -1.84
CCDC93-209ENST00000488908 HSD3B2P26439 372 aa3.53□□□□□ -1.84
CCDC93-209ENST00000488908 SUMO2P61956 95 aaKnown RBP3.53□□□□□ -1.84
CCDC93-209ENST00000488908 MYO1EQ12965 1108 aa3.53□□□□□ -1.84
CCDC93-209ENST00000488908 TMTC4Q5T4D3 741 aa3.53□□□□□ -1.84
CCDC93-209ENST00000488908 EMC10Q5UCC4 262 aa3.53□□□□□ -1.84
CCDC93-209ENST00000488908 EFCAB2Q5VUJ9 269 aa3.53□□□□□ -1.84
CCDC93-209ENST00000488908 TMEM65Q6PI78 240 aa3.53□□□□□ -1.84
CCDC93-209ENST00000488908 DPY19L3Q6ZPD9 716 aa3.53□□□□□ -1.84
CCDC93-209ENST00000488908 NECAB2Q7Z6G3 386 aa3.53□□□□□ -1.84
CCDC93-209ENST00000488908 ABRAQ8N0Z2 381 aa3.53□□□□□ -1.84
CCDC93-209ENST00000488908 BRIX1Q8TDN6 353 aaKnown RBP3.53□□□□□ -1.84
CCDC93-209ENST00000488908 LMBRD1Q9NUN5 540 aa3.53□□□□□ -1.84
CCDC93-209ENST00000488908 MCM8Q9UJA3 840 aa3.53□□□□□ -1.84
CCDC93-209ENST00000488908 MRPS17Q9Y2R5 130 aaKnown RBP3.53□□□□□ -1.84
CCDC93-209ENST00000488908 PCDHA1Q9Y5I3 950 aa3.53□□□□□ -1.84
CCDC93-209ENST00000488908 PSMD9O00233 223 aa3.52□□□□□ -1.85
CCDC93-209ENST00000488908 CES2O00748 559 aa3.52□□□□□ -1.85
CCDC93-209ENST00000488908 DTNBO60941 627 aa3.52□□□□□ -1.85
CCDC93-209ENST00000488908 FTLP02792 175 aaPredicted RBP3.52□□□□□ -1.85
CCDC93-209ENST00000488908 GRPP07492 148 aa3.52□□□□□ -1.85
CCDC93-209ENST00000488908 CYP2C9P11712 490 aa3.52□□□□□ -1.85
CCDC93-209ENST00000488908 TYRP14679 529 aa3.52□□□□□ -1.85
CCDC93-209ENST00000488908 ADORA2AP29274 412 aa3.52□□□□□ -1.85
CCDC93-209ENST00000488908 PSG6Q00889 435 aa3.52□□□□□ -1.85
CCDC93-209ENST00000488908 LARS2Q15031 903 aaKnown RBP3.52□□□□□ -1.85
CCDC93-209ENST00000488908 ABCB5Q2M3G0 1257 aa3.52□□□□□ -1.85
CCDC93-209ENST00000488908 AWAT1Q58HT5 328 aa3.52□□□□□ -1.85
CCDC93-209ENST00000488908 MMP21Q8N119 569 aa3.52□□□□□ -1.85
CCDC93-209ENST00000488908 MIER2Q8N344 545 aa3.52□□□□□ -1.85
CCDC93-209ENST00000488908 CXorf36Q9H7Y0 433 aa3.52□□□□□ -1.85
CCDC93-209ENST00000488908 MAFFQ9ULX9 164 aa3.52□□□□□ -1.85
CCDC93-209ENST00000488908 SHTN1A0MZ66 631 aa3.51□□□□□ -1.85
CCDC93-209ENST00000488908 SLC28A2O43868 658 aa3.51□□□□□ -1.85
CCDC93-209ENST00000488908 VNN1O95497 513 aa3.51□□□□□ -1.85
CCDC93-209ENST00000488908 COPB1P53618 953 aaKnown RBP3.51□□□□□ -1.85
CCDC93-209ENST00000488908 ZXDBP98169 803 aa3.51□□□□□ -1.85
CCDC93-209ENST00000488908 MTX1Q13505 466 aa3.51□□□□□ -1.85
CCDC93-209ENST00000488908 FHL3Q13643 280 aa3.51□□□□□ -1.85
CCDC93-209ENST00000488908 LY6KQ17RY6 165 aa3.51□□□□□ -1.85
CCDC93-209ENST00000488908 SLC9C1Q4G0N8 1177 aa3.51□□□□□ -1.85
CCDC93-209ENST00000488908 SYDE2Q5VT97 1194 aa3.51□□□□□ -1.85
CCDC93-209ENST00000488908 DENND2CQ68D51 928 aa3.51□□□□□ -1.85
CCDC93-209ENST00000488908 GSG1LQ6UXU4 331 aa3.51□□□□□ -1.85
CCDC93-209ENST00000488908 RANBP10Q6VN20 620 aa3.51□□□□□ -1.85
CCDC93-209ENST00000488908 PNMA8AQ86V59 439 aaPredicted RBP3.51□□□□□ -1.85
CCDC93-209ENST00000488908 TMEM204Q9BSN7 226 aa3.51□□□□□ -1.85
CCDC93-209ENST00000488908 MRPL44Q9H9J2 332 aaKnown RBP3.51□□□□□ -1.85
CCDC93-209ENST00000488908 ZBTB40Q9NUA8 1239 aa3.51□□□□□ -1.85
CCDC93-209ENST00000488908 PNPOQ9NVS9 261 aa3.51□□□□□ -1.85
CCDC93-209ENST00000488908 XPR1Q9UBH6 696 aa3.51□□□□□ -1.85
CCDC93-209ENST00000488908 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.51□□□□□ -1.85
CCDC93-209ENST00000488908 SNX14Q9Y5W7 946 aa3.51□□□□□ -1.85
CCDC93-209ENST00000488908 IGLV5-39A0A0G2JS06 123 aa3.5□□□□□ -1.85
CCDC93-209ENST00000488908 HDCP19113 662 aa3.5□□□□□ -1.85
CCDC93-209ENST00000488908 CDC25AP30304 524 aa3.5□□□□□ -1.85
CCDC93-209ENST00000488908 GKP32189 559 aa3.5□□□□□ -1.85
CCDC93-209ENST00000488908 SOX8P57073 446 aa3.5□□□□□ -1.85
CCDC93-209ENST00000488908 KRT17Q04695 432 aa3.5□□□□□ -1.85
CCDC93-209ENST00000488908 LMAN2Q12907 356 aa3.5□□□□□ -1.85
CCDC93-209ENST00000488908 MLC1Q15049 377 aa3.5□□□□□ -1.85
CCDC93-209ENST00000488908 PCBP2Q15366 365 aaKnown RBP eCLIP3.5□□□□□ -1.85
CCDC93-209ENST00000488908 SEC23BQ15437 767 aa3.5□□□□□ -1.85
CCDC93-209ENST00000488908 ASIC2Q16515 512 aa3.5□□□□□ -1.85
CCDC93-209ENST00000488908 ZNF750Q32MQ0 723 aa3.5□□□□□ -1.85
CCDC93-209ENST00000488908 MGAT5BQ3V5L5 792 aa3.5□□□□□ -1.85
CCDC93-209ENST00000488908 DGKKQ5KSL6 1271 aa3.5□□□□□ -1.85
CCDC93-209ENST00000488908 VSTM1Q6UX27 236 aa3.5□□□□□ -1.85
CCDC93-209ENST00000488908 DCDC5Q6ZRR9 648 aa3.5□□□□□ -1.85
CCDC93-209ENST00000488908 UBE2Q1Q7Z7E8 422 aa3.5□□□□□ -1.85
CCDC93-209ENST00000488908 C16orf71Q8IYS4 520 aaPredicted RBP3.5□□□□□ -1.85
CCDC93-209ENST00000488908 B4GALNT2Q8NHY0 566 aa3.5□□□□□ -1.85
CCDC93-209ENST00000488908 NLRP4Q96MN2 994 aa3.5□□□□□ -1.85
CCDC93-209ENST00000488908 FAM126AQ9BYI3 521 aaPredicted RBP3.5□□□□□ -1.85
CCDC93-209ENST00000488908 SNX15Q9NRS6 342 aa3.5□□□□□ -1.85
CCDC93-209ENST00000488908 SELENONQ9NZV5 590 aa3.5□□□□□ -1.85
CCDC93-209ENST00000488908 PMPCBO75439 489 aa3.49□□□□□ -1.85
CCDC93-209ENST00000488908 XRCC6P12956 609 aaKnown RBP eCLIP3.49□□□□□ -1.85
CCDC93-209ENST00000488908 APEHP13798 732 aaKnown RBP3.49□□□□□ -1.85
CCDC93-209ENST00000488908 DGKEP52429 567 aa3.49□□□□□ -1.85
CCDC93-209ENST00000488908 HSF1Q00613 529 aa3.49□□□□□ -1.85
CCDC93-209ENST00000488908 PTCHD4Q6ZW05 846 aa3.49□□□□□ -1.85
CCDC93-209ENST00000488908 ZNF280BQ86YH2 543 aa3.49□□□□□ -1.85
CCDC93-209ENST00000488908 RAB11FIP4Q86YS3 637 aa3.49□□□□□ -1.85
CCDC93-209ENST00000488908 HS6ST2Q96MM7 605 aa3.49□□□□□ -1.85
CCDC93-209ENST00000488908 MEIS3Q99687 375 aa3.49□□□□□ -1.85
CCDC93-209ENST00000488908 C17orf80Q9BSJ5 609 aa3.49□□□□□ -1.85
CCDC93-209ENST00000488908 TRHDEQ9UKU6 1024 aa3.49□□□□□ -1.85
CCDC93-209ENST00000488908 TMX2Q9Y320 296 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms