RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 SNX14Q9Y5W7 946 aa4.61□□□□□ -1.67
ECHDC1-217ENST00000488087 A1L4Q6 167 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 CCDC151A5D8V7 595 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 CLCA1A8K7I4 914 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 AREL1O15033 823 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 FOXN1O15353 648 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 URI1O94763 535 aaPredicted RBP4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 RHOBTB3O94955 611 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 TTLL1O95922 423 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 GCP02774 474 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 FESP07332 822 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 HGFP14210 728 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 IDEP14735 1019 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 KRT4P19013 534 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 SERPINB3P29508 390 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 CXCR5P32302 372 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 LIPAP38571 399 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 HTR3AP46098 478 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 ALDH9A1P49189 494 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 ATXN1P54253 815 aaKnown RBP4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 PDE1AP54750 535 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 BMPR2Q13873 1038 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 MORC3Q14149 939 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 ERCC6LQ2NKX8 1250 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 KIAA0895LQ68EN5 471 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 SLC9A4Q6AI14 798 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 FBXO38Q6PIJ6 1188 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 C1orf228Q6PIY5 440 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 Q6ZPA2 131 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 IZUMO1Q8IYV9 350 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 LRRC71Q8N4P6 559 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 AMER2Q8N7J2 671 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 VGLL2Q8N8G2 317 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 MORC4Q8TE76 937 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 SLC9A6Q92581 669 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 R3HDM4Q96D70 268 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 C17orf80Q9BSJ5 609 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 DPCDQ9BVM2 203 aaPredicted RBP4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 EIF2AQ9BY44 585 aaKnown RBP4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 TRIM5Q9C035 493 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 PCED1AQ9H1Q7 454 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 DKK4Q9UBT3 224 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 RGS17Q9UGC6 210 aaPredicted RBP4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 USP22Q9UPT9 525 aa4.6□□□□□ -1.67
ECHDC1-217ENST00000488087 A0A087X1B8 175 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 PSMD9O00233 223 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 CD3EAPO15446 510 aaKnown RBP4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 TPD52L2O43399 206 aaKnown RBP4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 EIF3JO75822 258 aaKnown RBP4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 VNN1O95497 513 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 NDST3O95803 873 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 ERBB2P04626 1255 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 IL6RP08887 468 aaPredicted RBP4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 EBLN1P0CF75 366 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 SETSIPP0DME0 302 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 NDUFB7P17568 137 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 YY1P25490 414 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 EEF1GP26641 437 aaKnown RBP4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 EPHA3P29320 983 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 ADRA1BP35368 520 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 GRIA3P42263 894 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 PGDP52209 483 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 BCAT1P54687 386 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 INHBCP55103 352 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 LY6KQ17RY6 165 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 SLC35G1Q2M3R5 365 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 DGKKQ5KSL6 1271 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 MZT2AQ6P582 158 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 CRTC1Q6UUV9 634 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 TOGARAM2Q6ZUX3 1019 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 KRT28Q7Z3Y7 464 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 CAND1Q86VP6 1230 aaKnown RBP4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 LDLRAD3Q86YD5 345 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 VPS37AQ8NEZ2 397 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 RFKQ969G6 155 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 SLC39A13Q96H72 371 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 ZNF668Q96K58 619 aaPredicted RBP4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 ZBTB45Q96K62 511 aaPredicted RBP4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 SALL3Q9BXA9 1300 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 INO80BQ9C086 356 aaPredicted RBP4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 AS3MTQ9HBK9 375 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 ARHGEF3Q9NR81 526 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 TAGLN3Q9UI15 199 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 CDC23Q9UJX2 597 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 MAGED2Q9UNF1 606 aaPredicted RBP4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 ST3GAL5Q9UNP4 418 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 HPSEQ9Y251 543 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 LRCH1Q9Y2L9 728 aa4.59□□□□□ -1.67
ECHDC1-217ENST00000488087 WDR27A2RRH5 827 aa4.58□□□□□ -1.68
ECHDC1-217ENST00000488087 PLEKHD1A6NEE1 506 aa4.58□□□□□ -1.68
ECHDC1-217ENST00000488087 LINC00473A8K010 186 aa4.58□□□□□ -1.68
ECHDC1-217ENST00000488087 PODXLO00592 558 aa4.58□□□□□ -1.68
ECHDC1-217ENST00000488087 SNX2O60749 519 aa4.58□□□□□ -1.68
ECHDC1-217ENST00000488087 ONECUT2O95948 504 aa4.58□□□□□ -1.68
ECHDC1-217ENST00000488087 UQCRC1P31930 480 aa4.58□□□□□ -1.68
ECHDC1-217ENST00000488087 ATICP31939 592 aa4.58□□□□□ -1.68
ECHDC1-217ENST00000488087 HSPA7P48741 367 aa4.58□□□□□ -1.68
ECHDC1-217ENST00000488087 GATMP50440 423 aa4.58□□□□□ -1.68
ECHDC1-217ENST00000488087 COPAP53621 1224 aa4.58□□□□□ -1.68
ECHDC1-217ENST00000488087 TGFB2P61812 414 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms