RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 LLGL2Q6P1M3 1020 aa12.29□□□□□ -0.44
TRA2B-214ENST00000487615 GPR20Q99678 358 aa12.29□□□□□ -0.44
TRA2B-214ENST00000487615 ZFYVE28Q9HCC9 887 aa12.29□□□□□ -0.44
TRA2B-214ENST00000487615 A0A1B0GUL6 1792 aa12.29□□□□□ -0.44
TRA2B-214ENST00000487615 SRRM3A6NNA2 597 aaPredicted RBP12.29□□□□□ -0.44
TRA2B-214ENST00000487615 H0Y3Z8 333 aa12.29□□□□□ -0.44
TRA2B-214ENST00000487615 APOC4-APOC2K7ER74 178 aa12.29□□□□□ -0.44
TRA2B-214ENST00000487615 MTA2O94776 668 aa12.29□□□□□ -0.44
TRA2B-214ENST00000487615 APOC2P02655 101 aa12.29□□□□□ -0.44
TRA2B-214ENST00000487615 GJB1P08034 283 aa12.29□□□□□ -0.44
TRA2B-214ENST00000487615 NCAM1P13591 858 aa12.29□□□□□ -0.44
TRA2B-214ENST00000487615 CHRNB2P17787 502 aa12.29□□□□□ -0.44
TRA2B-214ENST00000487615 MMEL1Q495T6 779 aa12.29□□□□□ -0.44
TRA2B-214ENST00000487615 FAM131BQ86XD5 332 aa12.29□□□□□ -0.44
TRA2B-214ENST00000487615 GLI3P10071 1580 aa12.29□□□□□ -0.44
TRA2B-214ENST00000487615 COL22A1Q8NFW1 1626 aaPredicted RBP12.29□□□□□ -0.44
TRA2B-214ENST00000487615 E5RJQ4 531 aa12.29□□□□□ -0.44
TRA2B-214ENST00000487615 KDELR1P24390 212 aa12.29□□□□□ -0.44
TRA2B-214ENST00000487615 TAF11Q15544 211 aa12.29□□□□□ -0.44
TRA2B-214ENST00000487615 ZBTB41Q5SVQ8 909 aa12.29□□□□□ -0.44
TRA2B-214ENST00000487615 KLC3Q6P597 504 aa12.29□□□□□ -0.44
TRA2B-214ENST00000487615 STAMBPL1Q96FJ0 436 aa12.29□□□□□ -0.44
TRA2B-214ENST00000487615 SLC40A1Q9NP59 571 aa12.29□□□□□ -0.44
TRA2B-214ENST00000487615 BTBD7Q9P203 1132 aa12.29□□□□□ -0.44
TRA2B-214ENST00000487615 LIASO43766 372 aa12.29□□□□□ -0.44
TRA2B-214ENST00000487615 HNRNPCL1O60812 293 aaKnown RBP12.29□□□□□ -0.44
TRA2B-214ENST00000487615 CCDC22O60826 627 aa12.29□□□□□ -0.44
TRA2B-214ENST00000487615 LMNAP02545 664 aaKnown RBP12.29□□□□□ -0.44
TRA2B-214ENST00000487615 RGS2P41220 211 aa12.29□□□□□ -0.44
TRA2B-214ENST00000487615 SPATA2LQ8IUW3 424 aaPredicted RBP12.29□□□□□ -0.44
TRA2B-214ENST00000487615 NDUFAF2Q8N183 169 aa12.29□□□□□ -0.44
TRA2B-214ENST00000487615 MCUQ8NE86 351 aa12.29□□□□□ -0.44
TRA2B-214ENST00000487615 ATXN7L3BQ96GX2 97 aa12.29□□□□□ -0.44
TRA2B-214ENST00000487615 PHTF1Q9UMS5 762 aa12.29□□□□□ -0.44
TRA2B-214ENST00000487615 TYW5A2RUC4 315 aaKnown RBP12.28□□□□□ -0.44
TRA2B-214ENST00000487615 SPDYE5A6NIY4 337 aa12.28□□□□□ -0.44
TRA2B-214ENST00000487615 C3orf70A6NLC5 250 aaPredicted RBP12.28□□□□□ -0.44
TRA2B-214ENST00000487615 AP3B1O00203 1094 aa12.28□□□□□ -0.44
TRA2B-214ENST00000487615 DFFAO00273 331 aa12.28□□□□□ -0.44
TRA2B-214ENST00000487615 CYB561D2O14569 222 aa12.28□□□□□ -0.44
TRA2B-214ENST00000487615 MTSS1O43312 755 aa12.28□□□□□ -0.44
TRA2B-214ENST00000487615 APOEP02649 317 aa12.28□□□□□ -0.44
TRA2B-214ENST00000487615 ZSCAN5DPP0CG00 497 aa12.28□□□□□ -0.44
TRA2B-214ENST00000487615 FDFT1P37268 417 aa12.28□□□□□ -0.44
TRA2B-214ENST00000487615 ACVR2BQ13705 512 aa12.28□□□□□ -0.44
TRA2B-214ENST00000487615 AUHQ13825 339 aaKnown RBP12.28□□□□□ -0.44
TRA2B-214ENST00000487615 PLEKHA7Q6IQ23 1121 aa12.28□□□□□ -0.44
TRA2B-214ENST00000487615 RAB44Q7Z6P3 723 aaPredicted RBP12.28□□□□□ -0.44
TRA2B-214ENST00000487615 KIAA0319LQ8IZA0 1049 aa12.28□□□□□ -0.44
TRA2B-214ENST00000487615 NEUROG2Q9H2A3 272 aa12.28□□□□□ -0.44
TRA2B-214ENST00000487615 MANSC1Q9H8J5 431 aa12.28□□□□□ -0.44
TRA2B-214ENST00000487615 CPA4Q9UI42 421 aa12.28□□□□□ -0.44
TRA2B-214ENST00000487615 G3BP2Q9UN86 482 aaKnown RBP12.28□□□□□ -0.44
TRA2B-214ENST00000487615 DRG1Q9Y295 367 aaKnown RBP12.28□□□□□ -0.44
TRA2B-214ENST00000487615 STXBP5LQ9Y2K9 1186 aa12.28□□□□□ -0.44
TRA2B-214ENST00000487615 NR2E1Q9Y466 385 aa12.28□□□□□ -0.44
TRA2B-214ENST00000487615 COL2A1P02458 1487 aaPredicted RBP12.28□□□□□ -0.44
TRA2B-214ENST00000487615 ARAP2Q8WZ64 1704 aa12.28□□□□□ -0.44
TRA2B-214ENST00000487615 MAST2Q6P0Q8 1798 aa12.28□□□□□ -0.44
TRA2B-214ENST00000487615 POLBP06746 335 aa12.28□□□□□ -0.44
TRA2B-214ENST00000487615 GJC2Q5T442 439 aaPredicted RBP12.28□□□□□ -0.44
TRA2B-214ENST00000487615 ZDHHC17Q8IUH5 632 aa12.28□□□□□ -0.44
TRA2B-214ENST00000487615 DDIT4Q9NX09 232 aa12.28□□□□□ -0.44
TRA2B-214ENST00000487615 MYH15Q9Y2K3 1946 aa12.28□□□□□ -0.44
TRA2B-214ENST00000487615 TMEM191CA6NGB0 347 aa12.28□□□□□ -0.44
TRA2B-214ENST00000487615 PEX10O60683 326 aa12.28□□□□□ -0.44
TRA2B-214ENST00000487615 AP1G2O75843 785 aa12.28□□□□□ -0.44
TRA2B-214ENST00000487615 TGM2P21980 687 aa12.28□□□□□ -0.44
TRA2B-214ENST00000487615 GRIK1P39086 918 aa12.28□□□□□ -0.44
TRA2B-214ENST00000487615 IQSEC1Q6DN90 963 aa12.28□□□□□ -0.44
TRA2B-214ENST00000487615 POLNQ7Z5Q5 900 aa12.28□□□□□ -0.44
TRA2B-214ENST00000487615 DNAJB3Q8WWF6 145 aa12.28□□□□□ -0.44
TRA2B-214ENST00000487615 HDAC11Q96DB2 347 aa12.28□□□□□ -0.44
TRA2B-214ENST00000487615 SCN7AQ01118 1682 aa12.28□□□□□ -0.44
TRA2B-214ENST00000487615 B4GALT4O60513 344 aa12.27□□□□□ -0.44
TRA2B-214ENST00000487615 CST3P01034 146 aaPredicted RBP12.27□□□□□ -0.44
TRA2B-214ENST00000487615 ACO1P21399 889 aaKnown RBP12.27□□□□□ -0.44
TRA2B-214ENST00000487615 AKAP5P24588 427 aa12.27□□□□□ -0.44
TRA2B-214ENST00000487615 SCTRP47872 440 aa12.27□□□□□ -0.44
TRA2B-214ENST00000487615 STX3Q13277 289 aa12.27□□□□□ -0.44
TRA2B-214ENST00000487615 FSCBQ5H9T9 825 aa12.27□□□□□ -0.44
TRA2B-214ENST00000487615 MTHFD1LQ6UB35 978 aa12.27□□□□□ -0.44
TRA2B-214ENST00000487615 MON1BQ7L1V2 547 aa12.27□□□□□ -0.44
TRA2B-214ENST00000487615 SCUBE3Q8IX30 993 aa12.27□□□□□ -0.44
TRA2B-214ENST00000487615 CENPTQ96BT3 561 aa12.27□□□□□ -0.44
TRA2B-214ENST00000487615 FAM111AQ96PZ2 611 aa12.27□□□□□ -0.44
TRA2B-214ENST00000487615 FIS1Q9Y3D6 152 aa12.27□□□□□ -0.44
TRA2B-214ENST00000487615 TCRBV7S2A1N4TA0A589 114 aa12.27□□□□□ -0.45
TRA2B-214ENST00000487615 SLC4A1P02730 911 aa12.27□□□□□ -0.45
TRA2B-214ENST00000487615 CYP2F1P24903 491 aa12.27□□□□□ -0.45
TRA2B-214ENST00000487615 SSTR1P30872 391 aa12.27□□□□□ -0.45
TRA2B-214ENST00000487615 MROH9Q5TGP6 573 aa12.27□□□□□ -0.45
TRA2B-214ENST00000487615 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.27□□□□□ -0.45
TRA2B-214ENST00000487615 AGGF1Q8N302 714 aaeCLIP12.27□□□□□ -0.451e-12■□□□□ 8.3
TRA2B-214ENST00000487615 KDM4CQ9H3R0 1056 aa12.27□□□□□ -0.45
TRA2B-214ENST00000487615 C2CD2Q9Y426 696 aa12.27□□□□□ -0.45
TRA2B-214ENST00000487615 DOCK2Q92608 1830 aa12.27□□□□□ -0.45
TRA2B-214ENST00000487615 UMODL1Q5DID0 1318 aa12.27□□□□□ -0.45
TRA2B-214ENST00000487615 O00370 1275 aa12.27□□□□□ -0.45
TRA2B-214ENST00000487615 DIAPH2O60879 1101 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms