RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 IPCEF1Q8WWN9 437 aaPredicted RBP4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 TFAP2BQ92481 460 aa4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 SPSB4Q96A44 273 aa4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 FCRL4Q96PJ5 515 aa4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 MED15Q96RN5 788 aa4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 TRIB1Q96RU8 372 aa4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 WDR12Q9GZL7 423 aaKnown RBP4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 MS4A7Q9GZW8 240 aaPredicted RBP4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 PTPRHQ9HD43 1115 aa4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 MRPS18AQ9NVS2 196 aaKnown RBP4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 MYO1AQ9UBC5 1043 aa4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 PCDHGB2Q9Y5G2 931 aa4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.25□□□□□ -1.73
SNRNP27-204ENST00000487029 YY2O15391 372 aa4.25□□□□□ -1.73
SNRNP27-204ENST00000487029 VPS4BO75351 444 aa4.25□□□□□ -1.73
SNRNP27-204ENST00000487029 TCEA3O75764 348 aa4.25□□□□□ -1.73
SNRNP27-204ENST00000487029 BMP15O95972 392 aa4.25□□□□□ -1.73
SNRNP27-204ENST00000487029 PRR35P0CG20 571 aa4.25□□□□□ -1.73
SNRNP27-204ENST00000487029 TXNP10599 105 aaKnown RBP4.25□□□□□ -1.73
SNRNP27-204ENST00000487029 HARSP12081 509 aaKnown RBP4.25□□□□□ -1.73
SNRNP27-204ENST00000487029 IL6STP40189 918 aaPredicted RBP4.25□□□□□ -1.73
SNRNP27-204ENST00000487029 TRAPPC10P48553 1259 aa4.25□□□□□ -1.73
SNRNP27-204ENST00000487029 TNFAIP2Q03169 654 aa4.25□□□□□ -1.73
SNRNP27-204ENST00000487029 IQCB1Q15051 598 aa4.25□□□□□ -1.73
SNRNP27-204ENST00000487029 ARL13BQ3SXY8 428 aa4.25□□□□□ -1.73
SNRNP27-204ENST00000487029 FCRLBQ6BAA4 426 aa4.25□□□□□ -1.73
SNRNP27-204ENST00000487029 ERAP2Q6P179 960 aa4.25□□□□□ -1.73
SNRNP27-204ENST00000487029 FOXR2Q6PJQ5 311 aa4.25□□□□□ -1.73
SNRNP27-204ENST00000487029 TSHZ1Q6ZSZ6 1077 aa4.25□□□□□ -1.73
SNRNP27-204ENST00000487029 UNC13DQ70J99 1090 aa4.25□□□□□ -1.73
SNRNP27-204ENST00000487029 RNF44Q7L0R7 432 aa4.25□□□□□ -1.73
SNRNP27-204ENST00000487029 CERS3Q8IU89 383 aa4.25□□□□□ -1.73
SNRNP27-204ENST00000487029 CRB3Q9BUF7 120 aa4.25□□□□□ -1.73
SNRNP27-204ENST00000487029 STK31Q9BXU1 1019 aa4.25□□□□□ -1.73
SNRNP27-204ENST00000487029 CHST8Q9H2A9 424 aa4.25□□□□□ -1.73
SNRNP27-204ENST00000487029 FLRT1Q9NZU1 646 aa4.25□□□□□ -1.73
SNRNP27-204ENST00000487029 CDC23Q9UJX2 597 aa4.25□□□□□ -1.73
SNRNP27-204ENST00000487029 ITGB1BP2Q9UKP3 347 aa4.25□□□□□ -1.73
SNRNP27-204ENST00000487029 NEU2Q9Y3R4 380 aa4.25□□□□□ -1.73
SNRNP27-204ENST00000487029 CEP83Q9Y592 693 aa4.25□□□□□ -1.73
SNRNP27-204ENST00000487029 CLCA1A8K7I4 914 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 E7ENX8 843 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 ADAMTS3O15072 1205 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 ERN1O75460 977 aaKnown RBP4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 RASSF9O75901 435 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 SOAT2O75908 522 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 NTN1O95631 604 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 ATXN1LP0C7T5 689 aaKnown RBP4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 KCNA2P16389 499 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 TECP42680 631 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 HSPA7P48741 367 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 TOB1P50616 345 aaPredicted RBP4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 TAP2Q03519 686 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 FHL1Q13642 323 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 DHX8Q14562 1220 aaKnown RBP4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 MPEG1Q2M385 716 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 SLC35G1Q2M3R5 365 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 KAZNQ674X7 775 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 TAF2Q6P1X5 1199 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 VWA1Q6PCB0 445 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 SLC30A10Q6XR72 485 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 ZNF782Q6ZMW2 699 aaPredicted RBP4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 CATSPERGQ6ZRH7 1159 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 GAS2L3Q86XJ1 694 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 YAF2Q8IY57 180 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 COLGALT2Q8IYK4 626 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 TXLNBQ8N3L3 684 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 FANCBQ8NB91 859 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 PSD4Q8NDX1 1056 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 NSUN7Q8NE18 718 aaKnown RBP4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 POC1BQ8TC44 478 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 RAPGEF4Q8WZA2 1011 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 TMEM41AQ96HV5 264 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 SLC46A1Q96NT5 459 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 MESP1Q9BRJ9 268 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 WACQ9BTA9 647 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 EIF2AQ9BY44 585 aaKnown RBP4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 TTYH3Q9C0H2 523 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 ZSCAN32Q9NX65 697 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 VSX1Q9NZR4 365 aaPredicted RBP4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 CTTNBP2NLQ9P2B4 639 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 ZNF212Q9UDV6 495 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 HDAC9Q9UKV0 1011 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 RAD54BQ9Y620 910 aa4.24□□□□□ -1.73
SNRNP27-204ENST00000487029 ZNF521Q96K83 1311 aa4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 TRGV11A0A075B6L2 103 aa4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 LOC102723971A0A1B0GUV8 181 aa4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 AREL1O15033 823 aa4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 DCLK1O15075 740 aa4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 MPPED1O15442 326 aa4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 CCP110O43303 1012 aa4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 INMTO95050 263 aa4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 MYL4P12829 197 aa4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 CHRM3P20309 590 aa4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 EEF1GP26641 437 aaKnown RBP4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 IL1R2P27930 398 aa4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 PTGER1P34995 402 aa4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 GRIA3P42263 894 aa4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 LOXL3P58215 753 aa4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 SATB1Q01826 763 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms