RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 CASC4Q6P4E1 433 aa12.92□□□□□ -0.34
HSPG2-211ENST00000486901 SPNS2Q8IVW8 549 aa12.92□□□□□ -0.34
HSPG2-211ENST00000486901 SCUBE1Q8IWY4 988 aa12.92□□□□□ -0.34
HSPG2-211ENST00000486901 IDI2Q9BXS1 227 aa12.92□□□□□ -0.34
HSPG2-211ENST00000486901 RANBP17Q9H2T7 1088 aaKnown RBP12.92□□□□□ -0.34
HSPG2-211ENST00000486901 SLC4A7Q9Y6M7 1214 aa12.92□□□□□ -0.34
HSPG2-211ENST00000486901 WDR64B1ANS9 1081 aa12.92□□□□□ -0.34
HSPG2-211ENST00000486901 STAM2O75886 525 aa12.92□□□□□ -0.34
HSPG2-211ENST00000486901 GJB1P08034 283 aa12.92□□□□□ -0.34
HSPG2-211ENST00000486901 NCF2P19878 526 aaPredicted RBP12.92□□□□□ -0.34
HSPG2-211ENST00000486901 RPL10AP62906 217 aaKnown RBP12.92□□□□□ -0.34
HSPG2-211ENST00000486901 ZNF200P98182 395 aaPredicted RBP12.92□□□□□ -0.34
HSPG2-211ENST00000486901 ZACNQ401N2 412 aa12.92□□□□□ -0.34
HSPG2-211ENST00000486901 PLEKHA7Q6IQ23 1121 aa12.92□□□□□ -0.34
HSPG2-211ENST00000486901 RASSF3Q86WH2 238 aa12.92□□□□□ -0.34
HSPG2-211ENST00000486901 CEP120Q8N960 986 aa12.92□□□□□ -0.34
HSPG2-211ENST00000486901 UBA3Q8TBC4 463 aa12.92□□□□□ -0.34
HSPG2-211ENST00000486901 ARHGEF4Q9NR80 690 aa12.92□□□□□ -0.34
HSPG2-211ENST00000486901 ZNF277Q9NRM2 450 aaPredicted RBP12.92□□□□□ -0.34
HSPG2-211ENST00000486901 NDE1Q9NXR1 346 aa12.92□□□□□ -0.34
HSPG2-211ENST00000486901 I3L4J1 428 aa12.92□□□□□ -0.34
HSPG2-211ENST00000486901 K7ERI5 159 aa12.92□□□□□ -0.34
HSPG2-211ENST00000486901 KIF3CO14782 793 aa12.92□□□□□ -0.34
HSPG2-211ENST00000486901 CAP2P40123 477 aa12.92□□□□□ -0.34
HSPG2-211ENST00000486901 RPS6KA3P51812 740 aa12.92□□□□□ -0.34
HSPG2-211ENST00000486901 PSMC1P62191 440 aaKnown RBP12.92□□□□□ -0.34
HSPG2-211ENST00000486901 ROR2Q01974 943 aaKnown RBP12.92□□□□□ -0.34
HSPG2-211ENST00000486901 PTP4A2Q12974 167 aa12.92□□□□□ -0.34
HSPG2-211ENST00000486901 PGM5Q15124 567 aa12.92□□□□□ -0.34
HSPG2-211ENST00000486901 C15orf59Q2T9L4 293 aaPredicted RBP12.92□□□□□ -0.34
HSPG2-211ENST00000486901 GRAMD1BQ3KR37 738 aa12.92□□□□□ -0.34
HSPG2-211ENST00000486901 NUDCD3Q8IVD9 361 aa12.92□□□□□ -0.34
HSPG2-211ENST00000486901 PPIL6Q8IXY8 311 aa12.92□□□□□ -0.34
HSPG2-211ENST00000486901 ULK2Q8IYT8 1036 aa12.92□□□□□ -0.34
HSPG2-211ENST00000486901 RIBC1Q8N443 379 aaPredicted RBP12.92□□□□□ -0.34
HSPG2-211ENST00000486901 ARFGAP1Q8N6T3 406 aa12.92□□□□□ -0.34
HSPG2-211ENST00000486901 B4GALNT2Q8NHY0 566 aa12.92□□□□□ -0.34
HSPG2-211ENST00000486901 CCDC110Q8TBZ0 833 aa12.92□□□□□ -0.34
HSPG2-211ENST00000486901 CIB2O75838 187 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 C4BPAP04003 597 aaKnown RBP12.91□□□□□ -0.34
HSPG2-211ENST00000486901 ABHD2P08910 425 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 ATP6V1B1P15313 513 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 PRKCEQ02156 737 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 TCEAL1Q15170 157 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 Q3C1V9 767 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 CES3Q6UWW8 571 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 PODNQ7Z5L7 613 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 NDUFAF2Q8N183 169 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 GALNT15Q8N3T1 639 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 PGBD4Q96DM1 585 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 ACSS3Q9H6R3 686 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 CCDC78A2IDD5 438 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 RNF8O76064 485 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 RARBP10826 455 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 KRT3P12035 628 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 GTF2A2P52657 109 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 PDE1BQ01064 536 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 LMNB2Q03252 620 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 USP37Q86T82 979 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 WDTC1Q8N5D0 677 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 DEPTORQ8TB45 409 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 CLEC4DQ8WXI8 215 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 SKA1Q96BD8 255 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 FAM81BQ96LP2 452 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 IWS1Q96ST2 819 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 ZNFX1Q9P2E3 1918 aaKnown RBP12.91□□□□□ -0.34
HSPG2-211ENST00000486901 KCNN4O15554 427 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 DGKIO75912 1065 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 ZBTB7AO95365 584 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 NPTXRO95502 500 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 MMP8P22894 467 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 DEUP1Q05D60 604 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 MYBPC2Q14324 1141 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 ADGRD1Q6QNK2 874 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 MPP5Q8N3R9 675 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 CISHQ9NSE2 258 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 DDX18Q9NVP1 670 aaKnown RBP12.91□□□□□ -0.34
HSPG2-211ENST00000486901 CYTH4Q9UIA0 394 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 PCDHGB4Q9UN71 923 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 PCDHGB5Q9Y5G0 923 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 SCINQ9Y6U3 715 aa12.91□□□□□ -0.34
HSPG2-211ENST00000486901 A0A0B4J269 797 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 LIN7AO14910 233 aaPredicted RBP12.9□□□□□ -0.34
HSPG2-211ENST00000486901 ITM2AO43736 263 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 LRCH4O75427 683 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 NELFEP18615 380 aaKnown RBP12.9□□□□□ -0.34
HSPG2-211ENST00000486901 RGS7P49802 495 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 CDH6P55285 790 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 PPP2R5DQ14738 602 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 PRKD1Q15139 912 aaPredicted RBP12.9□□□□□ -0.34
HSPG2-211ENST00000486901 PTPN20Q4JDL3 420 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 IMPG2Q9BZV3 1241 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 PDGFDQ9GZP0 370 aaPredicted RBP12.9□□□□□ -0.34
HSPG2-211ENST00000486901 PCDH9Q9HC56 1237 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 ETNK2Q9NVF9 386 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 LNPEPQ9UIQ6 1025 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 ASB3Q9Y575 518 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 COL16A1Q07092 1604 aaPredicted RBP12.9□□□□□ -0.34
HSPG2-211ENST00000486901 SPECC1L-ADORA2AF8WAN1 911 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 PROCP04070 461 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms