RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 THAP12O43422 761 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 FKBP9O95302 570 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 CTDNEP1O95476 244 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 FGFR1OPO95684 399 aaKnown RBP5.65□□□□□ -1.5
CCDC39-205ENST00000485055 CA3P07451 260 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 THPOP40225 353 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 NOP2P46087 812 aaKnown RBP5.65□□□□□ -1.5
CCDC39-205ENST00000485055 POLD2P49005 469 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 SCNN1BP51168 640 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 IFI35P80217 286 aaPredicted RBP5.65□□□□□ -1.5
CCDC39-205ENST00000485055 EPHA7Q15375 998 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 UBE2SQ16763 222 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 FAM187BQ17R55 369 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 C11orf91Q3C1V1 193 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 FKBP9P1Q75LS8 142 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 OTOP2Q7RTS6 562 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 LRRTM4Q86VH4 590 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 MICU3Q86XE3 530 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 CPOQ8IVL8 374 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 LRRC43Q8N309 656 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 CAMKK1Q8N5S9 505 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 BRF1Q92994 677 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 MTMR9Q96QG7 549 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 C11orf84Q9BUA3 381 aaPredicted RBP5.65□□□□□ -1.5
CCDC39-205ENST00000485055 DHX33Q9H6R0 707 aaKnown RBP5.65□□□□□ -1.5
CCDC39-205ENST00000485055 FAM204AQ9H8W3 233 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 EMC7Q9NPA0 242 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 WASH6PQ9NQA3 447 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 CCDC177Q9NQR7 707 aaPredicted RBP5.65□□□□□ -1.5
CCDC39-205ENST00000485055 SPTLC3Q9NUV7 552 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 DDX18Q9NVP1 670 aaKnown RBP5.65□□□□□ -1.5
CCDC39-205ENST00000485055 CDY2AQ9Y6F7 541 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 CNTNAP2Q9UHC6 1331 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 TDRD15B5MCY1 1934 aaKnown RBP5.65□□□□□ -1.51
CCDC39-205ENST00000485055 GRXCR1A8MXD5 290 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 DLL1O00548 723 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 ENC1O14682 589 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 MAN1A2O60476 641 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 FOXD2O60548 495 aaPredicted RBP5.65□□□□□ -1.51
CCDC39-205ENST00000485055 PHACTR2O75167 634 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 OFD1O75665 1012 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 ARHGEF15O94989 841 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 HNRNPLP14866 589 aaKnown RBP eCLIP5.65□□□□□ -1.51
CCDC39-205ENST00000485055 PORP16435 677 aaPredicted RBP5.65□□□□□ -1.51
CCDC39-205ENST00000485055 RPIAP49247 311 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 GSK3AP49840 483 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 AFF3P51826 1226 aaKnown RBP5.65□□□□□ -1.51
CCDC39-205ENST00000485055 ITGA8P53708 1063 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 SCAND1P57086 179 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 PPP2R2AP63151 447 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 ZNF200P98182 395 aaPredicted RBP5.65□□□□□ -1.51
CCDC39-205ENST00000485055 GIT2Q14161 759 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 PLCL1Q15111 1095 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 SMAD2Q15796 467 aaKnown RBP5.65□□□□□ -1.51
CCDC39-205ENST00000485055 EPC2Q52LR7 807 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 LILRA6Q6PI73 481 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 AGMOQ6ZNB7 445 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 SLC24A5Q71RS6 500 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 LPCAT2Q7L5N7 544 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 BMP8AQ7Z5Y6 402 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 SRGAP1Q7Z6B7 1085 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 CCDC60Q8IWA6 550 aaPredicted RBP5.65□□□□□ -1.51
CCDC39-205ENST00000485055 RNF168Q8IYW5 571 aaPredicted RBP5.65□□□□□ -1.51
CCDC39-205ENST00000485055 OR8H3Q8N146 312 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 CNNM3Q8NE01 707 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 KCNG4Q8TDN1 519 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 SNX29Q8TEQ0 813 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 GATAD2BQ8WXI9 593 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 GTF3C6Q969F1 213 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 MSLNLQ96KJ4 702 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 ZNF577Q9BSK1 485 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 TEKT3Q9BXF9 490 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 IFIH1Q9BYX4 1025 aaKnown RBP5.65□□□□□ -1.51
CCDC39-205ENST00000485055 SUV39H2Q9H5I1 410 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 NSUN3Q9H649 340 aaKnown RBP5.65□□□□□ -1.51
CCDC39-205ENST00000485055 DBR1Q9UK59 544 aaKnown RBP5.65□□□□□ -1.51
CCDC39-205ENST00000485055 INVSQ9Y283 1065 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 PCDHB14Q9Y5E9 798 aa5.65□□□□□ -1.51
CCDC39-205ENST00000485055 ZFP37Q9Y6Q3 630 aaPredicted RBP5.65□□□□□ -1.51
CCDC39-205ENST00000485055 KIF26AQ9ULI4 1882 aaPredicted RBP5.64□□□□□ -1.51
CCDC39-205ENST00000485055 A0A087X0M5 115 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 A0A1B0GX30 115 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 KLHL33A6NCF5 533 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 H0Y626 953 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 MTSS1O43312 755 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 TBX1O43435 398 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 SRGAP2O75044 1071 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 CENPAP49450 140 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 GPR85P60893 370 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 BTKQ06187 659 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 ADAM15Q13444 863 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 ACAP2Q15057 778 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 NONOQ15233 471 aaKnown RBP eCLIP5.64□□□□□ -1.51
CCDC39-205ENST00000485055 ZNF674Q2M3X9 581 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 FAM47CQ5HY64 1035 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 RPS26P11Q5JNZ5 115 aaPredicted RBP5.64□□□□□ -1.51
CCDC39-205ENST00000485055 ABHD17CQ6PCB6 329 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 XKR5Q6UX68 686 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.64□□□□□ -1.51
CCDC39-205ENST00000485055 CACNA2D3Q8IZS8 1091 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms