RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 MYO1FO00160 1098 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 AP1G2O75843 785 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 FBXO21O94952 628 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 EFEMP2O95967 443 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 URODP06132 367 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 RB1P06400 928 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 CCDC130P13994 396 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 IGFBP6P24592 240 aaPredicted RBP14.72□□□□□ -0.05
SMAD9-204ENST00000483941 SCNN1AP37088 669 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 GLUD2P49448 558 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 PDE4CQ08493 712 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 TUBB2AQ13885 445 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 CFAP221Q4G0U5 840 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 PLEKHA7Q6IQ23 1121 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 DNAJC24Q6P3W2 148 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 RNF168Q8IYW5 571 aaPredicted RBP14.72□□□□□ -0.05
SMAD9-204ENST00000483941 WDTC1Q8N5D0 677 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 C3orf20Q8ND61 904 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 SPPL2BQ8TCT7 592 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 MYLPFQ96A32 169 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 CEP295NLQ96MC4 621 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 PHOX2BQ99453 314 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 NCAPGQ9BPX3 1015 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 RTP3Q9BQQ7 232 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 TUBB2BQ9BVA1 445 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 TRIM62Q9BVG3 475 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 NUP85Q9BW27 656 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 SLC4A5Q9BY07 1137 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 B3GNT5Q9BYG0 378 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 LRRC4Q9HBW1 653 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 DMAP1Q9NPF5 467 aaPredicted RBP14.72□□□□□ -0.05
SMAD9-204ENST00000483941 MUTYHQ9UIF7 546 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 LZTS1Q9Y250 596 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 PAXBP1Q9Y5B6 917 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 NME7Q9Y5B8 376 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 PCDHGC5Q9Y5F6 944 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 CTAGE9A4FU28 777 aa14.71□□□□□ -0.05
SMAD9-204ENST00000483941 F8W810 466 aa14.71□□□□□ -0.05
SMAD9-204ENST00000483941 TRIM66O15016 1216 aa14.71□□□□□ -0.05
SMAD9-204ENST00000483941 ATP2C2O75185 946 aa14.71□□□□□ -0.05
SMAD9-204ENST00000483941 CFHP08603 1231 aa14.71□□□□□ -0.05
SMAD9-204ENST00000483941 RRM1P23921 792 aa14.71□□□□□ -0.05
SMAD9-204ENST00000483941 SLC1A1P43005 524 aa14.71□□□□□ -0.05
SMAD9-204ENST00000483941 RPL34P49207 117 aaKnown RBP14.71□□□□□ -0.05
SMAD9-204ENST00000483941 DSG1Q02413 1049 aa14.71□□□□□ -0.05
SMAD9-204ENST00000483941 UBE3AQ05086 875 aa14.71□□□□□ -0.05
SMAD9-204ENST00000483941 GPR17Q13304 367 aa14.71□□□□□ -0.05
SMAD9-204ENST00000483941 SMAD2Q15796 467 aaKnown RBP14.71□□□□□ -0.05
SMAD9-204ENST00000483941 SLC39A12Q504Y0 691 aa14.71□□□□□ -0.05
SMAD9-204ENST00000483941 DCUN1D2Q6PH85 259 aa14.71□□□□□ -0.05
SMAD9-204ENST00000483941 FAM35AQ86V20 835 aa14.71□□□□□ -0.05
SMAD9-204ENST00000483941 TTC30AQ86WT1 665 aa14.71□□□□□ -0.05
SMAD9-204ENST00000483941 PRSS33Q8NF86 280 aa14.71□□□□□ -0.05
SMAD9-204ENST00000483941 OR10T2Q8NGX3 314 aa14.71□□□□□ -0.05
SMAD9-204ENST00000483941 ZNF564Q8TBZ8 553 aaPredicted RBP14.71□□□□□ -0.05
SMAD9-204ENST00000483941 RIN2Q8WYP3 895 aaPredicted RBP14.71□□□□□ -0.05
SMAD9-204ENST00000483941 SELENOOQ9BVL4 669 aa14.71□□□□□ -0.05
SMAD9-204ENST00000483941 MRPL17Q9NRX2 175 aaKnown RBP14.71□□□□□ -0.05
SMAD9-204ENST00000483941 KRT82Q9NSB4 513 aa14.71□□□□□ -0.05
SMAD9-204ENST00000483941 TMEM51Q9NW97 253 aa14.71□□□□□ -0.05
SMAD9-204ENST00000483941 HSFX1Q9UBD0 423 aa14.71□□□□□ -0.05
SMAD9-204ENST00000483941 MTRRQ9UBK8 725 aa14.71□□□□□ -0.05
SMAD9-204ENST00000483941 DUSP10Q9Y6W6 482 aa14.71□□□□□ -0.05
SMAD9-204ENST00000483941 SIGLEC16A6NMB1 481 aa14.7□□□□□ -0.06
SMAD9-204ENST00000483941 NCK2O43639 380 aa14.7□□□□□ -0.06
SMAD9-204ENST00000483941 BUB1O43683 1085 aa14.7□□□□□ -0.06
SMAD9-204ENST00000483941 FGF18O76093 207 aa14.7□□□□□ -0.06
SMAD9-204ENST00000483941 MOCS3O95396 460 aa14.7□□□□□ -0.06
SMAD9-204ENST00000483941 KRT3P12035 628 aa14.7□□□□□ -0.06
SMAD9-204ENST00000483941 CPB1P15086 417 aa14.7□□□□□ -0.06
SMAD9-204ENST00000483941 BMPR1AP36894 532 aa14.7□□□□□ -0.06
SMAD9-204ENST00000483941 PBX3P40426 434 aa14.7□□□□□ -0.06
SMAD9-204ENST00000483941 MAGEA11P43364 429 aa14.7□□□□□ -0.06
SMAD9-204ENST00000483941 PTPN5P54829 565 aa14.7□□□□□ -0.06
SMAD9-204ENST00000483941 PTP4A2Q12974 167 aa14.7□□□□□ -0.06
SMAD9-204ENST00000483941 MAMLD1Q13495 774 aa14.7□□□□□ -0.06
SMAD9-204ENST00000483941 CLUL1Q15846 466 aa14.7□□□□□ -0.06
SMAD9-204ENST00000483941 PSMD5Q16401 504 aa14.7□□□□□ -0.06
SMAD9-204ENST00000483941 PTPN20Q4JDL3 420 aa14.7□□□□□ -0.06
SMAD9-204ENST00000483941 EFHC1Q5JVL4 640 aa14.7□□□□□ -0.06
SMAD9-204ENST00000483941 KIAA0319Q5VV43 1072 aa14.7□□□□□ -0.06
SMAD9-204ENST00000483941 TPGS2Q68CL5 300 aa14.7□□□□□ -0.06
SMAD9-204ENST00000483941 SLC8B1Q6J4K2 584 aa14.7□□□□□ -0.06
SMAD9-204ENST00000483941 C11orf63Q6NUN7 778 aa14.7□□□□□ -0.06
SMAD9-204ENST00000483941 SIX6OS1Q8N1H7 587 aa14.7□□□□□ -0.06
SMAD9-204ENST00000483941 TPCN2Q8NHX9 752 aa14.7□□□□□ -0.06
SMAD9-204ENST00000483941 FEZF2Q8TBJ5 459 aa14.7□□□□□ -0.06
SMAD9-204ENST00000483941 CPXM1Q96SM3 734 aa14.7□□□□□ -0.06
SMAD9-204ENST00000483941 PKMYT1Q99640 499 aa14.7□□□□□ -0.06
SMAD9-204ENST00000483941 NAPGQ99747 312 aaPredicted RBP14.7□□□□□ -0.06
SMAD9-204ENST00000483941 CSNK1G1Q9HCP0 422 aa14.7□□□□□ -0.06
SMAD9-204ENST00000483941 EHD2Q9NZN4 543 aa14.7□□□□□ -0.06
SMAD9-204ENST00000483941 TRIM10Q9UDY6 481 aa14.7□□□□□ -0.06
SMAD9-204ENST00000483941 IP6K2Q9UHH9 426 aa14.7□□□□□ -0.06
SMAD9-204ENST00000483941 DNAI1Q9UI46 699 aa14.7□□□□□ -0.06
SMAD9-204ENST00000483941 ZDBF2Q9HCK1 2354 aa14.69□□□□□ -0.06
SMAD9-204ENST00000483941 HCRTO43612 131 aa14.69□□□□□ -0.06
SMAD9-204ENST00000483941 TBC1D4O60343 1298 aa14.69□□□□□ -0.06
SMAD9-204ENST00000483941 GLI1P08151 1106 aa14.69□□□□□ -0.06
SMAD9-204ENST00000483941 LTBRP36941 435 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms