RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 AMPD2Q01433 879 aa19.73■□□□□ 0.75
CLK1-211ENST00000481641 ZACNQ401N2 412 aa19.73■□□□□ 0.75
CLK1-211ENST00000481641 LAIR1Q6GTX8 287 aa19.73■□□□□ 0.75
CLK1-211ENST00000481641 DGLUCYQ7Z3D6 616 aa19.73■□□□□ 0.75
CLK1-211ENST00000481641 ACOT1Q86TX2 421 aa19.73■□□□□ 0.75
CLK1-211ENST00000481641 FAM35AQ86V20 835 aa19.73■□□□□ 0.75
CLK1-211ENST00000481641 WDR5BQ86VZ2 330 aa19.73■□□□□ 0.75
CLK1-211ENST00000481641 SCAMP5Q8TAC9 235 aa19.73■□□□□ 0.75
CLK1-211ENST00000481641 CD101Q93033 1021 aa19.73■□□□□ 0.75
CLK1-211ENST00000481641 GDPD2Q9HCC8 539 aa19.73■□□□□ 0.75
CLK1-211ENST00000481641 HMGXB4Q9UGU5 601 aa19.73■□□□□ 0.75
CLK1-211ENST00000481641 CPQQ9Y646 472 aa19.73■□□□□ 0.75
CLK1-211ENST00000481641 FAM237AA0A1B0GTK4 181 aa19.72■□□□□ 0.75
CLK1-211ENST00000481641 ANTXRLA6NF34 631 aa19.72■□□□□ 0.75
CLK1-211ENST00000481641 CALUO43852 315 aaPredicted RBP19.72■□□□□ 0.75
CLK1-211ENST00000481641 MYL1P05976 194 aa19.72■□□□□ 0.75
CLK1-211ENST00000481641 DRD1P21728 446 aa19.72■□□□□ 0.75
CLK1-211ENST00000481641 YWHAQP27348 245 aa19.72■□□□□ 0.75
CLK1-211ENST00000481641 SLC7A9P82251 487 aa19.72■□□□□ 0.75
CLK1-211ENST00000481641 FOXK2Q01167 660 aa19.72■□□□□ 0.75
CLK1-211ENST00000481641 DPYDQ12882 1025 aa19.72■□□□□ 0.75
CLK1-211ENST00000481641 PUM1Q14671 1186 aaKnown RBP eCLIP19.72■□□□□ 0.75
CLK1-211ENST00000481641 CEP68Q76N32 757 aa19.72■□□□□ 0.75
CLK1-211ENST00000481641 SV2AQ7L0J3 742 aa19.72■□□□□ 0.75
CLK1-211ENST00000481641 NUP93Q8N1F7 819 aa19.72■□□□□ 0.75
CLK1-211ENST00000481641 TMC2Q8TDI7 906 aa19.72■□□□□ 0.75
CLK1-211ENST00000481641 TMEM174Q8WUU8 243 aa19.72■□□□□ 0.75
CLK1-211ENST00000481641 DLL3Q9NYJ7 618 aa19.72■□□□□ 0.75
CLK1-211ENST00000481641 EHD2Q9NZN4 543 aa19.72■□□□□ 0.75
CLK1-211ENST00000481641 CHORDC1Q9UHD1 332 aaPredicted RBP19.72■□□□□ 0.75
CLK1-211ENST00000481641 SLC8A2Q9UPR5 921 aa19.72■□□□□ 0.75
CLK1-211ENST00000481641 FRMD4BQ9Y2L6 1034 aa19.72■□□□□ 0.75
CLK1-211ENST00000481641 MYO16Q9Y6X6 1858 aa19.71■□□□□ 0.75
CLK1-211ENST00000481641 RHOBTB3O94955 611 aa19.71■□□□□ 0.75
CLK1-211ENST00000481641 OAS1P00973 400 aaKnown RBP19.71■□□□□ 0.75
CLK1-211ENST00000481641 HLA-DRAP01903 254 aa19.71■□□□□ 0.75
CLK1-211ENST00000481641 CCDC130P13994 396 aa19.71■□□□□ 0.75
CLK1-211ENST00000481641 HOXA6P31267 233 aa19.71■□□□□ 0.75
CLK1-211ENST00000481641 CNR2P34972 360 aa19.71■□□□□ 0.75
CLK1-211ENST00000481641 PPP3CCP48454 512 aa19.71■□□□□ 0.75
CLK1-211ENST00000481641 PDE6CP51160 858 aa19.71■□□□□ 0.75
CLK1-211ENST00000481641 NDST1P52848 882 aa19.71■□□□□ 0.75
CLK1-211ENST00000481641 SGSM1Q2NKQ1 1148 aa19.71■□□□□ 0.75
CLK1-211ENST00000481641 KRBA2Q6ZNG9 492 aa19.71■□□□□ 0.75
CLK1-211ENST00000481641 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.71■□□□□ 0.75
CLK1-211ENST00000481641 FILIP1Q7Z7B0 1213 aa19.71■□□□□ 0.75
CLK1-211ENST00000481641 GPR161Q8N6U8 529 aaKnown RBP19.71■□□□□ 0.75
CLK1-211ENST00000481641 RPLP0P6Q8NHW5 317 aa19.71■□□□□ 0.75
CLK1-211ENST00000481641 FBXO32Q969P5 355 aa19.71■□□□□ 0.75
CLK1-211ENST00000481641 SLITRK1Q96PX8 696 aa19.71■□□□□ 0.75
CLK1-211ENST00000481641 TRAF3IP3Q9Y228 551 aa19.71■□□□□ 0.75
CLK1-211ENST00000481641 RALGAPA1Q6GYQ0 2036 aa19.71■□□□□ 0.75
CLK1-211ENST00000481641 MYOFQ9NZM1 2061 aa19.71■□□□□ 0.75
CLK1-211ENST00000481641 MED19A0JLT2 244 aaPredicted RBP19.7■□□□□ 0.74
CLK1-211ENST00000481641 ATG13O75143 517 aa19.7■□□□□ 0.74
CLK1-211ENST00000481641 AP1G2O75843 785 aa19.7■□□□□ 0.74
CLK1-211ENST00000481641 AKAP3O75969 853 aa19.7■□□□□ 0.74
CLK1-211ENST00000481641 BEST1O76090 585 aa19.7■□□□□ 0.74
CLK1-211ENST00000481641 OLFM2O95897 454 aa19.7■□□□□ 0.74
CLK1-211ENST00000481641 RETP07949 1114 aa19.7■□□□□ 0.74
CLK1-211ENST00000481641 TRIM49P0CI25 452 aa19.7■□□□□ 0.74
CLK1-211ENST00000481641 TRIM49CP0CI26 452 aa19.7■□□□□ 0.74
CLK1-211ENST00000481641 MBL2P11226 248 aaPredicted RBP19.7■□□□□ 0.74
CLK1-211ENST00000481641 PFKLP17858 780 aa19.7■□□□□ 0.74
CLK1-211ENST00000481641 VAMP7P51809 220 aa19.7■□□□□ 0.74
CLK1-211ENST00000481641 NR1H3Q13133 447 aa19.7■□□□□ 0.74
CLK1-211ENST00000481641 GAB4Q2WGN9 574 aa19.7■□□□□ 0.74
CLK1-211ENST00000481641 FUKQ8N0W3 1084 aa19.7■□□□□ 0.74
CLK1-211ENST00000481641 FAM160A2Q8N612 972 aaPredicted RBP19.7■□□□□ 0.74
CLK1-211ENST00000481641 TNIP3Q96KP6 325 aa19.7■□□□□ 0.74
CLK1-211ENST00000481641 HHIPQ96QV1 700 aa19.7■□□□□ 0.74
CLK1-211ENST00000481641 CFAP97Q9P2B7 532 aa19.7■□□□□ 0.74
CLK1-211ENST00000481641 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.7■□□□□ 0.74
CLK1-211ENST00000481641 MYH10P35580 1976 aa19.7■□□□□ 0.74
CLK1-211ENST00000481641 A0A1W2PQ27 194 aa19.69■□□□□ 0.74
CLK1-211ENST00000481641 A0A1W2PQ64 194 aa19.69■□□□□ 0.74
CLK1-211ENST00000481641 A0A1W2PQD8 194 aa19.69■□□□□ 0.74
CLK1-211ENST00000481641 TNFRSF10BO14763 440 aa19.69■□□□□ 0.74
CLK1-211ENST00000481641 ZNF202O95125 648 aa19.69■□□□□ 0.74
CLK1-211ENST00000481641 RTN3O95197 1032 aaPredicted RBP19.69■□□□□ 0.74
CLK1-211ENST00000481641 NFATC1O95644 943 aa19.69■□□□□ 0.74
CLK1-211ENST00000481641 ASS1P00966 412 aaKnown RBP19.69■□□□□ 0.74
CLK1-211ENST00000481641 CYP17A1P05093 508 aa19.69■□□□□ 0.74
CLK1-211ENST00000481641 NR2F2P24468 414 aa19.69■□□□□ 0.74
CLK1-211ENST00000481641 OPRD1P41143 372 aa19.69■□□□□ 0.74
CLK1-211ENST00000481641 PIK3CAP42336 1068 aa19.69■□□□□ 0.74
CLK1-211ENST00000481641 ASPAP45381 313 aa19.69■□□□□ 0.74
CLK1-211ENST00000481641 GCLMP48507 274 aa19.69■□□□□ 0.74
CLK1-211ENST00000481641 SLC5A3P53794 718 aa19.69■□□□□ 0.74
CLK1-211ENST00000481641 C12orf29Q8N999 325 aa19.69■□□□□ 0.74
CLK1-211ENST00000481641 ZMIZ2Q8NF64 920 aa19.69■□□□□ 0.74
CLK1-211ENST00000481641 SLC2A14Q8TDB8 520 aa19.69■□□□□ 0.74
CLK1-211ENST00000481641 CCDC47Q96A33 483 aaKnown RBP19.69■□□□□ 0.74
CLK1-211ENST00000481641 SMOQ99835 787 aa19.69■□□□□ 0.74
CLK1-211ENST00000481641 SCAND2PQ9GZW5 306 aaPredicted RBP19.69■□□□□ 0.74
CLK1-211ENST00000481641 MMRN2Q9H8L6 949 aa19.69■□□□□ 0.74
CLK1-211ENST00000481641 APOBEC3GQ9HC16 384 aaKnown RBP19.69■□□□□ 0.74
CLK1-211ENST00000481641 DMAP1Q9NPF5 467 aaPredicted RBP19.69■□□□□ 0.74
CLK1-211ENST00000481641 KRT82Q9NSB4 513 aa19.69■□□□□ 0.74
CLK1-211ENST00000481641 FAM49BQ9NUQ9 324 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms