RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 SH3RF2Q8TEC5 729 aa12.15□□□□□ -0.46
CCM2-213ENST00000480658 FBXO32Q969P5 355 aa12.15□□□□□ -0.46
CCM2-213ENST00000480658 ZFYVE19Q96K21 471 aa12.15□□□□□ -0.46
CCM2-213ENST00000480658 NT5C1AQ9BXI3 368 aa12.15□□□□□ -0.46
CCM2-213ENST00000480658 NACA2Q9H009 215 aa12.15□□□□□ -0.46
CCM2-213ENST00000480658 GZF1Q9H116 711 aaPredicted RBP12.15□□□□□ -0.46
CCM2-213ENST00000480658 SMYD3Q9H7B4 428 aa12.15□□□□□ -0.46
CCM2-213ENST00000480658 ECT2Q9H8V3 914 aa12.15□□□□□ -0.46
CCM2-213ENST00000480658 GCNT4Q9P109 453 aa12.15□□□□□ -0.46
CCM2-213ENST00000480658 SMG5Q9UPR3 1016 aaKnown RBP12.15□□□□□ -0.46
CCM2-213ENST00000480658 CCL26Q9Y258 94 aa12.15□□□□□ -0.46
CCM2-213ENST00000480658 PCDHA5Q9Y5H7 936 aa12.15□□□□□ -0.46
CCM2-213ENST00000480658 OBSL1O75147 1896 aa12.14□□□□□ -0.47
CCM2-213ENST00000480658 PRR5-ARHGAP8B1AHC4 643 aa12.14□□□□□ -0.47
CCM2-213ENST00000480658 CHURC1-FNTBB4DL54 471 aa12.14□□□□□ -0.47
CCM2-213ENST00000480658 PSMA7O14818 248 aa12.14□□□□□ -0.47
CCM2-213ENST00000480658 AKAP3O75969 853 aa12.14□□□□□ -0.47
CCM2-213ENST00000480658 OAS1P00973 400 aaKnown RBP12.14□□□□□ -0.47
CCM2-213ENST00000480658 MXI1P50539 228 aa12.14□□□□□ -0.47
CCM2-213ENST00000480658 MCCD1P59942 119 aaPredicted RBP12.14□□□□□ -0.47
CCM2-213ENST00000480658 ARHGAP8P85298 464 aa12.14□□□□□ -0.47
CCM2-213ENST00000480658 LMNB2Q03252 620 aa12.14□□□□□ -0.47
CCM2-213ENST00000480658 TNK2Q07912 1038 aa12.14□□□□□ -0.47
CCM2-213ENST00000480658 CETN1Q12798 172 aa12.14□□□□□ -0.47
CCM2-213ENST00000480658 HSF5Q4G112 596 aaPredicted RBP12.14□□□□□ -0.47
CCM2-213ENST00000480658 ZCWPW2Q504Y3 356 aa12.14□□□□□ -0.47
CCM2-213ENST00000480658 WDR44Q5JSH3 913 aa12.14□□□□□ -0.47
CCM2-213ENST00000480658 HECTD3Q5T447 861 aa12.14□□□□□ -0.47
CCM2-213ENST00000480658 FOXR2Q6PJQ5 311 aa12.14□□□□□ -0.47
CCM2-213ENST00000480658 SCARA5Q6ZMJ2 495 aa12.14□□□□□ -0.47
CCM2-213ENST00000480658 FMR1NBQ8N0W7 255 aaPredicted RBP12.14□□□□□ -0.47
CCM2-213ENST00000480658 FBXL13Q8NEE6 735 aa12.14□□□□□ -0.47
CCM2-213ENST00000480658 CD101Q93033 1021 aa12.14□□□□□ -0.47
CCM2-213ENST00000480658 SMARCE1Q969G3 411 aa12.14□□□□□ -0.47
CCM2-213ENST00000480658 LRRC3BQ96PB8 259 aa12.14□□□□□ -0.47
CCM2-213ENST00000480658 ZNF518BQ9C0D4 1074 aa12.14□□□□□ -0.47
CCM2-213ENST00000480658 SMG9Q9H0W8 520 aaKnown RBP12.14□□□□□ -0.47
CCM2-213ENST00000480658 METTL14Q9HCE5 456 aaKnown RBP12.14□□□□□ -0.47
CCM2-213ENST00000480658 CSNK1G1Q9HCP0 422 aa12.14□□□□□ -0.47
CCM2-213ENST00000480658 HPS4Q9NQG7 708 aa12.14□□□□□ -0.47
CCM2-213ENST00000480658 TLR8Q9NR97 1041 aaKnown RBP12.14□□□□□ -0.47
CCM2-213ENST00000480658 KRT82Q9NSB4 513 aa12.14□□□□□ -0.47
CCM2-213ENST00000480658 SLC8A2Q9UPR5 921 aa12.14□□□□□ -0.47
CCM2-213ENST00000480658 DENND4CQ5VZ89 1909 aa12.13□□□□□ -0.47
CCM2-213ENST00000480658 E2F8A0AVK6 867 aa12.13□□□□□ -0.47
CCM2-213ENST00000480658 FAM92AA1XBS5 289 aa12.13□□□□□ -0.47
CCM2-213ENST00000480658 C2orf78A6NCI8 922 aa12.13□□□□□ -0.47
CCM2-213ENST00000480658 AP1G2O75843 785 aa12.13□□□□□ -0.47
CCM2-213ENST00000480658 VNN1O95497 513 aa12.13□□□□□ -0.47
CCM2-213ENST00000480658 ABL1P00519 1130 aa12.13□□□□□ -0.47
CCM2-213ENST00000480658 HLA-DRAP01903 254 aa12.13□□□□□ -0.47
CCM2-213ENST00000480658 TDGF1P13385 188 aa12.13□□□□□ -0.47
CCM2-213ENST00000480658 GJA4P35212 333 aa12.13□□□□□ -0.47
CCM2-213ENST00000480658 ASPAP45381 313 aa12.13□□□□□ -0.47
CCM2-213ENST00000480658 SOX9P48436 509 aa12.13□□□□□ -0.47
CCM2-213ENST00000480658 SLC5A3P53794 718 aa12.13□□□□□ -0.47
CCM2-213ENST00000480658 TAF10Q12962 218 aa12.13□□□□□ -0.47
CCM2-213ENST00000480658 E2F5Q15329 346 aa12.13□□□□□ -0.47
CCM2-213ENST00000480658 EML3Q32P44 896 aa12.13□□□□□ -0.47
CCM2-213ENST00000480658 TXNDC11Q6PKC3 985 aa12.13□□□□□ -0.47
CCM2-213ENST00000480658 SUMF1Q8NBK3 374 aa12.13□□□□□ -0.47
CCM2-213ENST00000480658 FAM84AQ96KN4 292 aa12.13□□□□□ -0.47
CCM2-213ENST00000480658 B3GNT5Q9BYG0 378 aa12.13□□□□□ -0.47
CCM2-213ENST00000480658 GOLPH3LQ9H4A5 285 aa12.13□□□□□ -0.47
CCM2-213ENST00000480658 DPEP3Q9H4B8 488 aa12.13□□□□□ -0.47
CCM2-213ENST00000480658 IL37Q9NZH6 218 aa12.13□□□□□ -0.47
CCM2-213ENST00000480658 CIZ1Q9ULV3 898 aaPredicted RBP12.13□□□□□ -0.47
CCM2-213ENST00000480658 DMDP11532 3685 aa12.13□□□□□ -0.47
CCM2-213ENST00000480658 PTPRDP23468 1912 aa12.13□□□□□ -0.47
CCM2-213ENST00000480658 FANCMQ8IYD8 2048 aa12.13□□□□□ -0.47
CCM2-213ENST00000480658 ZFHX2Q9C0A1 2572 aaPredicted RBP12.13□□□□□ -0.47
CCM2-213ENST00000480658 HELZP42694 1942 aaKnown RBP12.12□□□□□ -0.47
CCM2-213ENST00000480658 BICDL2A1A5D9 508 aa12.12□□□□□ -0.47
CCM2-213ENST00000480658 LEFTY2O00292 366 aa12.12□□□□□ -0.47
CCM2-213ENST00000480658 HCRTO43612 131 aa12.12□□□□□ -0.47
CCM2-213ENST00000480658 PRR29P0C7W0 189 aa12.12□□□□□ -0.47
CCM2-213ENST00000480658 MBL2P11226 248 aaPredicted RBP12.12□□□□□ -0.47
CCM2-213ENST00000480658 TBXAS1P24557 533 aaPredicted RBP12.12□□□□□ -0.47
CCM2-213ENST00000480658 ID4P47928 161 aa12.12□□□□□ -0.47
CCM2-213ENST00000480658 GCLMP48507 274 aa12.12□□□□□ -0.47
CCM2-213ENST00000480658 NDST1P52848 882 aa12.12□□□□□ -0.47
CCM2-213ENST00000480658 DLG4P78352 724 aa12.12□□□□□ -0.47
CCM2-213ENST00000480658 TRIM68Q6AZZ1 485 aa12.12□□□□□ -0.47
CCM2-213ENST00000480658 KLHDC10Q6PID8 442 aa12.12□□□□□ -0.47
CCM2-213ENST00000480658 SYT13Q7L8C5 426 aa12.12□□□□□ -0.47
CCM2-213ENST00000480658 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.12□□□□□ -0.47
CCM2-213ENST00000480658 ACOT1Q86TX2 421 aa12.12□□□□□ -0.47
CCM2-213ENST00000480658 WDR5BQ86VZ2 330 aa12.12□□□□□ -0.47
CCM2-213ENST00000480658 FUKQ8N0W3 1084 aa12.12□□□□□ -0.47
CCM2-213ENST00000480658 ARHGAP18Q8N392 663 aa12.12□□□□□ -0.47
CCM2-213ENST00000480658 SPATA20Q8TB22 786 aa12.12□□□□□ -0.47
CCM2-213ENST00000480658 PLEKHO2Q8TD55 490 aa12.12□□□□□ -0.47
CCM2-213ENST00000480658 SLC2A14Q8TDB8 520 aa12.12□□□□□ -0.47
CCM2-213ENST00000480658 KCNV2Q8TDN2 545 aa12.12□□□□□ -0.47
CCM2-213ENST00000480658 DHTKD1Q96HY7 919 aaPredicted RBP12.12□□□□□ -0.47
CCM2-213ENST00000480658 LOXL4Q96JB6 756 aa12.12□□□□□ -0.47
CCM2-213ENST00000480658 HNRNPABQ99729 332 aaKnown RBP12.12□□□□□ -0.47
CCM2-213ENST00000480658 LSM7Q9UK45 103 aaKnown RBP12.12□□□□□ -0.47
CCM2-213ENST00000480658 SH3BP1Q9Y3L3 701 aa12.12□□□□□ -0.47
CCM2-213ENST00000480658 CPQQ9Y646 472 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms