RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 GIMAP4Q9NUV9 329 aa6.37□□□□□ -1.39
PRPF4B-205ENST00000480058 LMCD1Q9NZU5 365 aa6.37□□□□□ -1.39
PRPF4B-205ENST00000480058 C6orf203Q9P0P8 240 aaPredicted RBP6.37□□□□□ -1.39
PRPF4B-205ENST00000480058 IQSEC2Q5JU85 1478 aa6.37□□□□□ -1.39
PRPF4B-205ENST00000480058 C5orf58C9J3I9 102 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 SHOX2O60902 331 aaPredicted RBP6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 RECQL5O94762 991 aaPredicted RBP6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 MPOP05164 745 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 PAEPP09466 180 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 NPY2RP49146 381 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 AQP5P55064 265 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 SLC12A1Q13621 1099 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 VPS72Q15906 364 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 FAM45BPQ6NSW5 357 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 LRRC74BQ6ZQY2 392 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 ZNF720Q7Z2F6 126 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 EXOC3L1Q86VI1 746 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 KATNAL2Q8IYT4 538 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 GMCL1Q96IK5 515 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 VPS50Q96JG6 964 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 ACSS3Q9H6R3 686 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 HAO1Q9UJM8 370 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 ANKRD6Q9Y2G4 727 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 DAGLAQ9Y4D2 1042 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 AK5Q9Y6K8 562 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 PRAMEF22A3QJZ6 481 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 RRN3P2A6NIE6 340 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 FAM25AB3EWG3 89 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 FAM25CB3EWG5 89 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 FAM25GB3EWG6 89 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 APOC4-APOC2K7ER74 178 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 BIRC5O15392 142 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 SASH3O75995 380 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 APOC2P02655 101 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 TGM2P21980 687 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 NUDT2P50583 147 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 OASLQ15646 514 aaKnown RBP6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 SPDYAQ5MJ70 313 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 DEPDC1Q5TB30 811 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 TIGD7Q6NT04 549 aaPredicted RBP6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 SWSAP1Q6NVH7 229 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 SCARA5Q6ZMJ2 495 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 ANKS3Q6ZW76 656 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 NET1Q7Z628 596 aaPredicted RBP6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 UNC45BQ8IWX7 931 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 ADCY4Q8NFM4 1077 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 ETNPPLQ8TBG4 499 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 CELF1Q92879 486 aaKnown RBP6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 NSMCE2Q96MF7 247 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 TMEM237Q96Q45 408 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 SRPK1Q96SB4 655 aaKnown RBP6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 THAP2Q9H0W7 228 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 FSCN2O14926 492 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 UBDO15205 165 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 SNAP91O60641 907 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 ATP9AO75110 1047 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 TPBGLP0DKB5 382 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 CA8P35219 290 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 GPSM2P81274 684 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 MPP3Q13368 585 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 CNGA2Q16280 664 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 RGS21Q2M5E4 152 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 LRRC8DQ7L1W4 858 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 ZBTB33Q86T24 672 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 ATPAF2Q8N5M1 289 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 TTLL6Q8N841 843 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 ZNF280CQ8ND82 737 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 MDM1Q8TC05 714 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 S100ZQ8WXG8 99 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 ZKSCAN4Q969J2 545 aaPredicted RBP6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 ZBTB10Q96DT7 871 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 TMA16Q96EY4 203 aaKnown RBP6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 OXNAD1Q96HP4 312 aaPredicted RBP6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 JMJD4Q9H9V9 463 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 VPS26AO75436 327 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 TGDSO95455 350 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 RAB25P57735 213 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 PDAP1Q13442 181 aaKnown RBP6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 FAM98CQ17RN3 349 aaKnown RBP6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 DOK7Q18PE1 504 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 SLC27A3Q5K4L6 730 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 SNRNP48Q6IEG0 339 aaKnown RBP6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 SPOCD1Q6ZMY3 1216 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 ZNF786Q8N393 782 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 UGT2B28Q9BY64 529 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 EXOSC4Q9NPD3 245 aaKnown RBP6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 ETAA1Q9NY74 926 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 CROTQ9UKG9 612 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 FAM205CA6NFA0 338 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 PSMG1O95456 288 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 UBTFL6P0CB48 400 aaPredicted RBP6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 KITP10721 976 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 CRABP2P29373 138 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 UBXN2AP68543 259 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 ENPEPQ07075 957 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 EIF2B5Q13144 721 aaKnown RBP6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 DGUOKQ16854 277 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 TJAP1Q5JTD0 557 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms