RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 PDGFRBP09619 1106 aa13.62□□□□□ -0.23
SEC13-216ENST00000479868 FGFR1P11362 822 aa13.62□□□□□ -0.23
SEC13-216ENST00000479868 LMO2P25791 158 aa13.62□□□□□ -0.23
SEC13-216ENST00000479868 AXLP30530 894 aa13.62□□□□□ -0.23
SEC13-216ENST00000479868 ZNF157P51786 506 aaPredicted RBP13.62□□□□□ -0.23
SEC13-216ENST00000479868 GAD2Q05329 585 aa13.62□□□□□ -0.23
SEC13-216ENST00000479868 SOX4Q06945 474 aaPredicted RBP13.62□□□□□ -0.23
SEC13-216ENST00000479868 FBXO47Q5MNV8 452 aa13.62□□□□□ -0.23
SEC13-216ENST00000479868 NPNTQ6UXI9 565 aa13.62□□□□□ -0.23
SEC13-216ENST00000479868 TMEM110Q86TL2 294 aa13.62□□□□□ -0.23
SEC13-216ENST00000479868 UNC45BQ8IWX7 931 aa13.62□□□□□ -0.23
SEC13-216ENST00000479868 C10orf67Q8IYJ2 551 aa13.62□□□□□ -0.23
SEC13-216ENST00000479868 C7orf31Q8N865 590 aa13.62□□□□□ -0.23
SEC13-216ENST00000479868 RSAD1Q9HA92 442 aa13.62□□□□□ -0.23
SEC13-216ENST00000479868 INTS9Q9NV88 658 aaKnown RBP13.62□□□□□ -0.23
SEC13-216ENST00000479868 FARP1Q9Y4F1 1045 aaPredicted RBP13.62□□□□□ -0.23
SEC13-216ENST00000479868 GOLGA8MH3BSY2 632 aa13.61□□□□□ -0.23
SEC13-216ENST00000479868 CCDC130P13994 396 aa13.61□□□□□ -0.23
SEC13-216ENST00000479868 CTCFP49711 727 aaPredicted RBP13.61□□□□□ -0.23
SEC13-216ENST00000479868 NRLP54845 237 aa13.61□□□□□ -0.23
SEC13-216ENST00000479868 SLC6A3Q01959 620 aa13.61□□□□□ -0.23
SEC13-216ENST00000479868 DPYSL3Q14195 570 aa13.61□□□□□ -0.23
SEC13-216ENST00000479868 CCDC142Q17RM4 750 aa13.61□□□□□ -0.23
SEC13-216ENST00000479868 UNC93AQ86WB7 457 aa13.61□□□□□ -0.23
SEC13-216ENST00000479868 TAB3Q8N5C8 712 aaPredicted RBP13.61□□□□□ -0.23
SEC13-216ENST00000479868 ARRDC4Q8NCT1 418 aa13.61□□□□□ -0.23
SEC13-216ENST00000479868 RSAD2Q8WXG1 361 aa13.61□□□□□ -0.23
SEC13-216ENST00000479868 ZNF317Q96PQ6 595 aaPredicted RBP13.61□□□□□ -0.23
SEC13-216ENST00000479868 PRMT1Q99873 361 aaKnown RBP13.61□□□□□ -0.23
SEC13-216ENST00000479868 FRMD8P1Q9BZ68 369 aaPredicted RBP13.61□□□□□ -0.23
SEC13-216ENST00000479868 HESX1Q9UBX0 185 aa13.61□□□□□ -0.23
SEC13-216ENST00000479868 DDX20Q9UHI6 824 aaKnown RBP13.61□□□□□ -0.23
SEC13-216ENST00000479868 SHOC2Q9UQ13 582 aa13.61□□□□□ -0.23
SEC13-216ENST00000479868 C17orf102A2RUQ5 167 aa13.61□□□□□ -0.23
SEC13-216ENST00000479868 KPNA7A9QM74 516 aa13.61□□□□□ -0.23
SEC13-216ENST00000479868 PRPSAP2O60256 369 aa13.61□□□□□ -0.23
SEC13-216ENST00000479868 BANF1O75531 89 aa13.61□□□□□ -0.23
SEC13-216ENST00000479868 ABHD2P08910 425 aa13.61□□□□□ -0.23
SEC13-216ENST00000479868 DRD4P21917 467 aa13.61□□□□□ -0.23
SEC13-216ENST00000479868 RPL22P35268 128 aaKnown RBP13.61□□□□□ -0.23
SEC13-216ENST00000479868 EIF3EP60228 445 aaKnown RBP13.61□□□□□ -0.23
SEC13-216ENST00000479868 STAT4Q14765 748 aa13.61□□□□□ -0.23
SEC13-216ENST00000479868 ANKRD22Q5VYY1 191 aa13.61□□□□□ -0.23
SEC13-216ENST00000479868 SCYL2Q6P3W7 929 aa13.61□□□□□ -0.23
SEC13-216ENST00000479868 VSTM1Q6UX27 236 aa13.61□□□□□ -0.23
SEC13-216ENST00000479868 C17orf99Q6UX52 265 aa13.61□□□□□ -0.23
SEC13-216ENST00000479868 ZBED8Q8IZ13 594 aa13.61□□□□□ -0.23
SEC13-216ENST00000479868 SPATA18Q8TC71 538 aa13.61□□□□□ -0.23
SEC13-216ENST00000479868 CLEC4CQ8WTT0 213 aa13.61□□□□□ -0.23
SEC13-216ENST00000479868 FAM172AQ8WUF8 416 aa13.61□□□□□ -0.23
SEC13-216ENST00000479868 CPT1BQ92523 772 aa13.61□□□□□ -0.23
SEC13-216ENST00000479868 CHMP6Q96FZ7 201 aa13.61□□□□□ -0.23
SEC13-216ENST00000479868 AP5M1Q9H0R1 490 aa13.61□□□□□ -0.23
SEC13-216ENST00000479868 NGRNQ9NPE2 291 aaKnown RBP13.61□□□□□ -0.23
SEC13-216ENST00000479868 GPATCH2LQ9NWQ4 482 aa13.61□□□□□ -0.23
SEC13-216ENST00000479868 EURLQ9NYK6 297 aa13.61□□□□□ -0.23
SEC13-216ENST00000479868 NAALADL1Q9UQQ1 740 aa13.61□□□□□ -0.23
SEC13-216ENST00000479868 C5orf60A6NFR6 353 aa13.6□□□□□ -0.23
SEC13-216ENST00000479868 DPYSL4O14531 572 aa13.6□□□□□ -0.23
SEC13-216ENST00000479868 CDH16O75309 829 aa13.6□□□□□ -0.23
SEC13-216ENST00000479868 SETSIPP0DME0 302 aa13.6□□□□□ -0.23
SEC13-216ENST00000479868 RBP3P10745 1247 aa13.6□□□□□ -0.23
SEC13-216ENST00000479868 TFE3P19532 575 aaPredicted RBP13.6□□□□□ -0.23
SEC13-216ENST00000479868 ADORA2BP29275 332 aa13.6□□□□□ -0.23
SEC13-216ENST00000479868 ZC3H12AQ5D1E8 599 aaKnown RBP13.6□□□□□ -0.23
SEC13-216ENST00000479868 XKR4Q5GH76 650 aa13.6□□□□□ -0.23
SEC13-216ENST00000479868 FAM182AQ5T1J6 154 aa13.6□□□□□ -0.23
SEC13-216ENST00000479868 ARHGAP17Q68EM7 881 aa13.6□□□□□ -0.23
SEC13-216ENST00000479868 CAPN12Q6ZSI9 719 aa13.6□□□□□ -0.23
SEC13-216ENST00000479868 CEP128Q6ZU80 1094 aa13.6□□□□□ -0.23
SEC13-216ENST00000479868 FAM71DQ8N9W8 422 aa13.6□□□□□ -0.23
SEC13-216ENST00000479868 SMG8Q8ND04 991 aaKnown RBP13.6□□□□□ -0.23
SEC13-216ENST00000479868 LGALS13Q9UHV8 139 aa13.6□□□□□ -0.23
SEC13-216ENST00000479868 IPPQ9Y573 584 aa13.6□□□□□ -0.23
SEC13-216ENST00000479868 CEP350Q5VT06 3117 aa13.6□□□□□ -0.23
SEC13-216ENST00000479868 TMEM120BA0PK00 339 aa13.6□□□□□ -0.23
SEC13-216ENST00000479868 MCF2LO15068 1137 aa13.6□□□□□ -0.23
SEC13-216ENST00000479868 CD4P01730 458 aa13.6□□□□□ -0.23
SEC13-216ENST00000479868 KCNE1P15382 129 aa13.6□□□□□ -0.23
SEC13-216ENST00000479868 IL4RP24394 825 aa13.6□□□□□ -0.23
SEC13-216ENST00000479868 GCAP28676 217 aa13.6□□□□□ -0.23
SEC13-216ENST00000479868 ATP5DP30049 168 aa13.6□□□□□ -0.23
SEC13-216ENST00000479868 SDC4P31431 198 aa13.6□□□□□ -0.23
SEC13-216ENST00000479868 GNL1P36915 607 aaPredicted RBP13.6□□□□□ -0.23
SEC13-216ENST00000479868 IFNAR2P48551 515 aa13.6□□□□□ -0.23
SEC13-216ENST00000479868 CRYBB1P53674 252 aaPredicted RBP13.6□□□□□ -0.23
SEC13-216ENST00000479868 PURAQ00577 322 aaKnown RBP13.6□□□□□ -0.23
SEC13-216ENST00000479868 LRRC14Q15048 493 aa13.6□□□□□ -0.23
SEC13-216ENST00000479868 FSCN1Q16658 493 aaKnown RBP13.6□□□□□ -0.23
SEC13-216ENST00000479868 ZC3H18Q86VM9 953 aaKnown RBP13.6□□□□□ -0.23
SEC13-216ENST00000479868 MAK16Q9BXY0 300 aaKnown RBP13.6□□□□□ -0.23
SEC13-216ENST00000479868 A0A087WUV0 522 aaPredicted RBP13.59□□□□□ -0.23
SEC13-216ENST00000479868 TCRBV7S3A2A0A539 114 aa13.59□□□□□ -0.23
SEC13-216ENST00000479868 MYADML2A6NDP7 307 aa13.59□□□□□ -0.23
SEC13-216ENST00000479868 ALOX15BO15296 676 aa13.59□□□□□ -0.23
SEC13-216ENST00000479868 IGHA2P01877 340 aa13.59□□□□□ -0.23
SEC13-216ENST00000479868 RGS2P41220 211 aa13.59□□□□□ -0.23
SEC13-216ENST00000479868 PDIA2Q13087 525 aaKnown RBP13.59□□□□□ -0.23
SEC13-216ENST00000479868 NOMO1Q15155 1222 aa13.59□□□□□ -0.23
SEC13-216ENST00000479868 CA9Q16790 459 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms