RNA–Protein interactions for RNA: ENST00000479384.1

CLOCK-204, Transcript of clock circadian regulator, humanhuman

TSL 2

Gene CLOCK, Length 426 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-204ENST00000479384 ABHD11Q8NFV4 315 aa4.14□□□□□ -1.75
CLOCK-204ENST00000479384 C16orf52Q8NHV5 167 aa4.14□□□□□ -1.75
CLOCK-204ENST00000479384 SPATA3Q8NHX4 192 aa4.14□□□□□ -1.75
CLOCK-204ENST00000479384 DIS3LQ8TF46 1054 aaKnown RBP4.14□□□□□ -1.75
CLOCK-204ENST00000479384 RUNDC1Q96C34 613 aa4.14□□□□□ -1.75
CLOCK-204ENST00000479384 COQ8BQ96D53 544 aa4.14□□□□□ -1.75
CLOCK-204ENST00000479384 LENG8Q96PV6 779 aaPredicted RBP4.14□□□□□ -1.75
CLOCK-204ENST00000479384 ACO2Q99798 780 aaKnown RBP4.14□□□□□ -1.75
CLOCK-204ENST00000479384 C1orf112Q9NSG2 853 aa4.14□□□□□ -1.75
CLOCK-204ENST00000479384 CCNL1Q9UK58 526 aaPredicted RBP4.14□□□□□ -1.75
CLOCK-204ENST00000479384 NDRG4Q9ULP0 352 aaKnown RBP4.14□□□□□ -1.75
CLOCK-204ENST00000479384 IGKV2D-30A0A075B6S6 120 aa4.13□□□□□ -1.75
CLOCK-204ENST00000479384 FTLP02792 175 aaPredicted RBP4.13□□□□□ -1.75
CLOCK-204ENST00000479384 RENBPP51606 427 aa4.13□□□□□ -1.75
CLOCK-204ENST00000479384 HLTFQ14527 1009 aaKnown RBP eCLIP4.13□□□□□ -1.75
CLOCK-204ENST00000479384 IQCB1Q15051 598 aa4.13□□□□□ -1.75
CLOCK-204ENST00000479384 TBC1D25Q3MII6 688 aa4.13□□□□□ -1.75
CLOCK-204ENST00000479384 CCDC157Q569K6 752 aa4.13□□□□□ -1.75
CLOCK-204ENST00000479384 CCAR1Q8IX12 1150 aaKnown RBP4.13□□□□□ -1.75
CLOCK-204ENST00000479384 CCDC146Q8IYE0 955 aa4.13□□□□□ -1.75
CLOCK-204ENST00000479384 ZBTB34Q8NCN2 500 aa4.13□□□□□ -1.75
CLOCK-204ENST00000479384 NSMCE1Q8WV22 266 aa4.13□□□□□ -1.75
CLOCK-204ENST00000479384 VCPIP1Q96JH7 1222 aa4.13□□□□□ -1.75
CLOCK-204ENST00000479384 SNX18Q96RF0 628 aa4.13□□□□□ -1.75
CLOCK-204ENST00000479384 LMBRD1Q9NUN5 540 aa4.13□□□□□ -1.75
CLOCK-204ENST00000479384 GABRQQ9UN88 632 aa4.13□□□□□ -1.75
CLOCK-204ENST00000479384 PCDHA1Q9Y5I3 950 aa4.13□□□□□ -1.75
CLOCK-204ENST00000479384 FRMPD2Q68DX3 1309 aaPredicted RBP4.13□□□□□ -1.75
CLOCK-204ENST00000479384 LY6G6EA0A0G2JKS1 128 aa4.12□□□□□ -1.75
CLOCK-204ENST00000479384 UBE2Q2LH0YL09 131 aa4.12□□□□□ -1.75
CLOCK-204ENST00000479384 H3BML4 177 aa4.12□□□□□ -1.75
CLOCK-204ENST00000479384 ADAM10O14672 748 aa4.12□□□□□ -1.75
CLOCK-204ENST00000479384 MAP2K6P52564 334 aa4.12□□□□□ -1.75
CLOCK-204ENST00000479384 HTRA4P83105 476 aaPredicted RBP4.12□□□□□ -1.75
CLOCK-204ENST00000479384 E2F2Q14209 437 aa4.12□□□□□ -1.75
CLOCK-204ENST00000479384 GBX1Q14549 363 aa4.12□□□□□ -1.75
CLOCK-204ENST00000479384 GRM3Q14832 879 aa4.12□□□□□ -1.75
CLOCK-204ENST00000479384 RBMS2Q15434 407 aaKnown RBP4.12□□□□□ -1.75
CLOCK-204ENST00000479384 TRIM71Q2Q1W2 868 aaKnown RBP4.12□□□□□ -1.75
CLOCK-204ENST00000479384 L1TD1Q5T7N2 865 aaKnown RBP4.12□□□□□ -1.75
CLOCK-204ENST00000479384 MEX3CQ5U5Q3 659 aaKnown RBP4.12□□□□□ -1.75
CLOCK-204ENST00000479384 PPP4R4Q6NUP7 873 aa4.12□□□□□ -1.75
CLOCK-204ENST00000479384 SERPINA13PQ6UXR4 307 aa4.12□□□□□ -1.75
CLOCK-204ENST00000479384 KSR2Q6VAB6 950 aa4.12□□□□□ -1.75
CLOCK-204ENST00000479384 DENND1CQ8IV53 801 aa4.12□□□□□ -1.75
CLOCK-204ENST00000479384 PCSK9Q8NBP7 692 aaKnown RBP4.12□□□□□ -1.75
CLOCK-204ENST00000479384 PPP1R35Q8TAP8 253 aa4.12□□□□□ -1.75
CLOCK-204ENST00000479384 SOCS4Q8WXH5 440 aa4.12□□□□□ -1.75
CLOCK-204ENST00000479384 TIFAQ96CG3 184 aa4.12□□□□□ -1.75
CLOCK-204ENST00000479384 FAM204AQ9H8W3 233 aa4.12□□□□□ -1.75
CLOCK-204ENST00000479384 DDX20Q9UHI6 824 aaKnown RBP4.12□□□□□ -1.75
CLOCK-204ENST00000479384 NOTCH4Q99466 2003 aa4.12□□□□□ -1.75
CLOCK-204ENST00000479384 CCDC194A0A1B0GVG4 234 aa4.11□□□□□ -1.75
CLOCK-204ENST00000479384 TCRBV5S1A1TA0A578 114 aa4.11□□□□□ -1.75
CLOCK-204ENST00000479384 PRR23D1E9PI22 279 aaPredicted RBP4.11□□□□□ -1.75
CLOCK-204ENST00000479384 UBXN7O94888 489 aa4.11□□□□□ -1.75
CLOCK-204ENST00000479384 UNC5CO95185 931 aa4.11□□□□□ -1.75
CLOCK-204ENST00000479384 ALDH2P05091 517 aa4.11□□□□□ -1.75
CLOCK-204ENST00000479384 MYL1P05976 194 aa4.11□□□□□ -1.75
CLOCK-204ENST00000479384 CSF1RP07333 972 aa4.11□□□□□ -1.75
CLOCK-204ENST00000479384 DLDP09622 509 aaKnown RBP4.11□□□□□ -1.75
CLOCK-204ENST00000479384 PRR23D2P0DMB1 279 aaPredicted RBP4.11□□□□□ -1.75
CLOCK-204ENST00000479384 PRF1P14222 555 aa4.11□□□□□ -1.75
CLOCK-204ENST00000479384 HDCP19113 662 aa4.11□□□□□ -1.75
CLOCK-204ENST00000479384 FPR3P25089 353 aa4.11□□□□□ -1.75
CLOCK-204ENST00000479384 ALDH5A1P51649 535 aaPredicted RBP4.11□□□□□ -1.75
CLOCK-204ENST00000479384 ZNF268Q14587 947 aaPredicted RBP4.11□□□□□ -1.75
CLOCK-204ENST00000479384 TWIST1Q15672 202 aa4.11□□□□□ -1.75
CLOCK-204ENST00000479384 RNASE12Q5GAN4 147 aaKnown RBP4.11□□□□□ -1.75
CLOCK-204ENST00000479384 CCSAPQ6IQ19 270 aaPredicted RBP4.11□□□□□ -1.75
CLOCK-204ENST00000479384 MTHFD1LQ6UB35 978 aa4.11□□□□□ -1.75
CLOCK-204ENST00000479384 ZNF813Q6ZN06 617 aa4.11□□□□□ -1.75
CLOCK-204ENST00000479384 MEPCEQ7L2J0 689 aaKnown RBP4.11□□□□□ -1.75
CLOCK-204ENST00000479384 FAM167AQ96KS9 214 aa4.11□□□□□ -1.75
CLOCK-204ENST00000479384 MARK4Q96L34 752 aa4.11□□□□□ -1.75
CLOCK-204ENST00000479384 CGRRF1Q99675 332 aa4.11□□□□□ -1.75
CLOCK-204ENST00000479384 EFHD1Q9BUP0 239 aa4.11□□□□□ -1.75
CLOCK-204ENST00000479384 CIPCQ9C0C6 399 aa4.11□□□□□ -1.75
CLOCK-204ENST00000479384 PNPOQ9NVS9 261 aa4.11□□□□□ -1.75
CLOCK-204ENST00000479384 FAM90A10PA6NDY2 464 aa4.1□□□□□ -1.75
CLOCK-204ENST00000479384 hCG_1984214I3L0E3 225 aa4.1□□□□□ -1.75
CLOCK-204ENST00000479384 DSCR3O14972 297 aa4.1□□□□□ -1.75
CLOCK-204ENST00000479384 PLIN1O60240 522 aa4.1□□□□□ -1.75
CLOCK-204ENST00000479384 TUSC2O75896 110 aa4.1□□□□□ -1.75
CLOCK-204ENST00000479384 GRPP07492 148 aa4.1□□□□□ -1.75
CLOCK-204ENST00000479384 TMEM191BP0C7N4 346 aa4.1□□□□□ -1.75
CLOCK-204ENST00000479384 HTR1BP28222 390 aa4.1□□□□□ -1.75
CLOCK-204ENST00000479384 HOXD9P28356 352 aaPredicted RBP4.1□□□□□ -1.75
CLOCK-204ENST00000479384 VIPR2P41587 438 aa4.1□□□□□ -1.75
CLOCK-204ENST00000479384 PDE6CP51160 858 aa4.1□□□□□ -1.75
CLOCK-204ENST00000479384 CYP1B1Q16678 543 aa4.1□□□□□ -1.75
CLOCK-204ENST00000479384 FAM187BQ17R55 369 aa4.1□□□□□ -1.75
CLOCK-204ENST00000479384 C10orf25Q5T742 122 aa4.1□□□□□ -1.75
CLOCK-204ENST00000479384 DEPDC1Q5TB30 811 aa4.1□□□□□ -1.75
CLOCK-204ENST00000479384 EMC10Q5UCC4 262 aa4.1□□□□□ -1.75
CLOCK-204ENST00000479384 OVCH2Q7RTZ1 564 aa4.1□□□□□ -1.75
CLOCK-204ENST00000479384 SRGAP1Q7Z6B7 1085 aa4.1□□□□□ -1.75
CLOCK-204ENST00000479384 DAAM2Q86T65 1068 aa4.1□□□□□ -1.75
CLOCK-204ENST00000479384 BRIX1Q8TDN6 353 aaKnown RBP4.1□□□□□ -1.75
CLOCK-204ENST00000479384 TTC17Q96AE7 1141 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms