RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 FCARP24071 287 aa21.64■■□□□ 1.05
VARS-224ENST00000479051 USP8P40818 1118 aa21.64■■□□□ 1.05
VARS-224ENST00000479051 ZNF132P52740 706 aa21.64■■□□□ 1.05
VARS-224ENST00000479051 NFKBIBQ15653 356 aa21.64■■□□□ 1.05
VARS-224ENST00000479051 GJB7Q6PEY0 223 aa21.64■■□□□ 1.05
VARS-224ENST00000479051 POTEHQ6S545 545 aa21.64■■□□□ 1.05
VARS-224ENST00000479051 TRIM67Q6ZTA4 783 aa21.64■■□□□ 1.05
VARS-224ENST00000479051 DHX40Q8IX18 779 aaKnown RBP21.64■■□□□ 1.05
VARS-224ENST00000479051 YAF2Q8IY57 180 aa21.64■■□□□ 1.05
VARS-224ENST00000479051 SCAMP5Q8TAC9 235 aa21.64■■□□□ 1.05
VARS-224ENST00000479051 RPP25Q9BUL9 199 aaKnown RBP21.64■■□□□ 1.05
VARS-224ENST00000479051 LSM14BQ9BX40 385 aaKnown RBP21.64■■□□□ 1.05
VARS-224ENST00000479051 UBXN6Q9BZV1 441 aa21.64■■□□□ 1.05
VARS-224ENST00000479051 KIF9Q9HAQ2 790 aa21.64■■□□□ 1.05
VARS-224ENST00000479051 OBP2AQ9NY56 170 aa21.64■■□□□ 1.05
VARS-224ENST00000479051 DNAJC12Q9UKB3 198 aa21.64■■□□□ 1.05
VARS-224ENST00000479051 FBXL21Q9UKT6 434 aa21.64■■□□□ 1.05
VARS-224ENST00000479051 LGALS16A8MUM7 142 aa21.63■■□□□ 1.05
VARS-224ENST00000479051 HEPACAM2A8MVW5 462 aa21.63■■□□□ 1.05
VARS-224ENST00000479051 O00370 1275 aa21.63■■□□□ 1.05
VARS-224ENST00000479051 MED7O43513 233 aa21.63■■□□□ 1.05
VARS-224ENST00000479051 CKMP06732 381 aa21.63■■□□□ 1.05
VARS-224ENST00000479051 USP17L7P0C7H9 530 aa21.63■■□□□ 1.05
VARS-224ENST00000479051 SETSIPP0DME0 302 aa21.63■■□□□ 1.05
VARS-224ENST00000479051 VIPR2P41587 438 aa21.63■■□□□ 1.05
VARS-224ENST00000479051 PFKPQ01813 784 aa21.63■■□□□ 1.05
VARS-224ENST00000479051 BST2Q10589 180 aaKnown RBP21.63■■□□□ 1.05
VARS-224ENST00000479051 CELF5Q8N6W0 485 aaKnown RBP21.63■■□□□ 1.05
VARS-224ENST00000479051 TRMT61BQ9BVS5 477 aaKnown RBP21.63■■□□□ 1.05
VARS-224ENST00000479051 SIX2Q9NPC8 291 aa21.63■■□□□ 1.05
VARS-224ENST00000479051 SLC2A4RGQ9NR83 387 aa21.63■■□□□ 1.05
VARS-224ENST00000479051 IL37Q9NZH6 218 aa21.63■■□□□ 1.05
VARS-224ENST00000479051 ZNF840PA6NDX5 716 aa21.62■■□□□ 1.05
VARS-224ENST00000479051 LRRC10BA6NIK2 292 aa21.62■■□□□ 1.05
VARS-224ENST00000479051 RNF225M0QZC1 329 aaPredicted RBP21.62■■□□□ 1.05
VARS-224ENST00000479051 NARSO43776 548 aaKnown RBP21.62■■□□□ 1.05
VARS-224ENST00000479051 PSMC3P17980 439 aa21.62■■□□□ 1.05
VARS-224ENST00000479051 APBA1Q02410 837 aa21.62■■□□□ 1.05
VARS-224ENST00000479051 KCNMA1Q12791 1236 aa21.62■■□□□ 1.05
VARS-224ENST00000479051 CNGA2Q16280 664 aa21.62■■□□□ 1.05
VARS-224ENST00000479051 KLHDC7AQ5VTJ3 777 aa21.62■■□□□ 1.05
VARS-224ENST00000479051 LCLAT1Q6UWP7 414 aa21.62■■□□□ 1.05
VARS-224ENST00000479051 MFSD6LQ8IWD5 586 aa21.62■■□□□ 1.05
VARS-224ENST00000479051 SHC3Q92529 594 aa21.62■■□□□ 1.05
VARS-224ENST00000479051 SMOC2Q9H3U7 446 aa21.62■■□□□ 1.05
VARS-224ENST00000479051 PLCB1Q9NQ66 1216 aa21.62■■□□□ 1.05
VARS-224ENST00000479051 TLR8Q9NR97 1041 aaKnown RBP21.62■■□□□ 1.05
VARS-224ENST00000479051 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.62■■□□□ 1.05
VARS-224ENST00000479051 SCML2Q9UQR0 700 aa21.62■■□□□ 1.05
VARS-224ENST00000479051 DAAM1Q9Y4D1 1078 aa21.62■■□□□ 1.05
VARS-224ENST00000479051 DENND4CQ5VZ89 1909 aa21.62■■□□□ 1.05
VARS-224ENST00000479051 NUP210Q8TEM1 1887 aaPredicted RBP21.62■■□□□ 1.05
VARS-224ENST00000479051 OBSL1O75147 1896 aa21.61■■□□□ 1.05
VARS-224ENST00000479051 FAM92AA1XBS5 289 aa21.61■■□□□ 1.05
VARS-224ENST00000479051 TMEM221A6NGB7 291 aa21.61■■□□□ 1.05
VARS-224ENST00000479051 HHLA1C9JL84 531 aa21.61■■□□□ 1.05
VARS-224ENST00000479051 M0QYV0 167 aa21.61■■□□□ 1.05
VARS-224ENST00000479051 M0R296 226 aa21.61■■□□□ 1.05
VARS-224ENST00000479051 XPO1O14980 1071 aaKnown RBP21.61■■□□□ 1.05
VARS-224ENST00000479051 HDCP19113 662 aa21.61■■□□□ 1.05
VARS-224ENST00000479051 BRD2P25440 801 aaKnown RBP21.61■■□□□ 1.05
VARS-224ENST00000479051 UBXN1Q04323 297 aa21.61■■□□□ 1.05
VARS-224ENST00000479051 RAPGEF1Q13905 1077 aa21.61■■□□□ 1.05
VARS-224ENST00000479051 ZNF268Q14587 947 aaPredicted RBP21.61■■□□□ 1.05
VARS-224ENST00000479051 FILIP1LQ4L180 1135 aa21.61■■□□□ 1.05
VARS-224ENST00000479051 TMEM31Q5JXX7 168 aa21.61■■□□□ 1.05
VARS-224ENST00000479051 VITQ6UXI7 678 aa21.61■■□□□ 1.05
VARS-224ENST00000479051 PIGZQ86VD9 579 aa21.61■■□□□ 1.05
VARS-224ENST00000479051 TTC30AQ86WT1 665 aa21.61■■□□□ 1.05
VARS-224ENST00000479051 TFAP2BQ92481 460 aa21.61■■□□□ 1.05
VARS-224ENST00000479051 PCMTD1Q96MG8 357 aaPredicted RBP21.61■■□□□ 1.05
VARS-224ENST00000479051 PLA2G2FQ9BZM2 168 aa21.61■■□□□ 1.05
VARS-224ENST00000479051 HSD3B7Q9H2F3 369 aa21.61■■□□□ 1.05
VARS-224ENST00000479051 BRD9Q9H8M2 597 aa21.61■■□□□ 1.05
VARS-224ENST00000479051 LRRC4Q9HBW1 653 aa21.61■■□□□ 1.05
VARS-224ENST00000479051 TDP1Q9NUW8 608 aa21.61■■□□□ 1.05
VARS-224ENST00000479051 WNT16Q9UBV4 365 aa21.61■■□□□ 1.05
VARS-224ENST00000479051 PATJQ8NI35 1801 aa21.6■■□□□ 1.05
VARS-224ENST00000479051 ZNF638Q14966 1978 aaKnown RBP21.6■■□□□ 1.05
VARS-224ENST00000479051 C2orf78A6NCI8 922 aa21.6■■□□□ 1.05
VARS-224ENST00000479051 GOLGA6L19H0YKK7 550 aa21.6■■□□□ 1.05
VARS-224ENST00000479051 ZNF263O14978 683 aa21.6■■□□□ 1.05
VARS-224ENST00000479051 GPR37L1O60883 481 aa21.6■■□□□ 1.05
VARS-224ENST00000479051 PRAMEF12O95522 483 aa21.6■■□□□ 1.05
VARS-224ENST00000479051 CFHP08603 1231 aa21.6■■□□□ 1.05
VARS-224ENST00000479051 GNA15P30679 374 aa21.6■■□□□ 1.05
VARS-224ENST00000479051 KIF11P52732 1056 aa21.6■■□□□ 1.05
VARS-224ENST00000479051 GPC5P78333 572 aa21.6■■□□□ 1.05
VARS-224ENST00000479051 PDE4CQ08493 712 aa21.6■■□□□ 1.05
VARS-224ENST00000479051 GRM2Q14416 872 aa21.6■■□□□ 1.05
VARS-224ENST00000479051 HECTD3Q5T447 861 aa21.6■■□□□ 1.05
VARS-224ENST00000479051 GPRIN1Q7Z2K8 1008 aa21.6■■□□□ 1.05
VARS-224ENST00000479051 GPIHBP1Q8IV16 184 aa21.6■■□□□ 1.05
VARS-224ENST00000479051 ARL14EPQ8N8R7 260 aaPredicted RBP21.6■■□□□ 1.05
VARS-224ENST00000479051 BPIFB1Q8TDL5 484 aa21.6■■□□□ 1.05
VARS-224ENST00000479051 IRF7Q92985 503 aa21.6■■□□□ 1.05
VARS-224ENST00000479051 THG1LQ9NWX6 298 aaKnown RBP21.6■■□□□ 1.05
VARS-224ENST00000479051 GMIPQ9P107 970 aa21.6■■□□□ 1.05
VARS-224ENST00000479051 CHORDC1Q9UHD1 332 aaPredicted RBP21.6■■□□□ 1.05
VARS-224ENST00000479051 THAP12O43422 761 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms