RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 KRT18P05783 430 aaKnown RBP6.16□□□□□ -1.42
CCDC171-207ENST00000478913 ELANEP08246 267 aa6.16□□□□□ -1.42
CCDC171-207ENST00000478913 INSRRP14616 1297 aa6.16□□□□□ -1.42
CCDC171-207ENST00000478913 NPR1P16066 1061 aa6.16□□□□□ -1.42
CCDC171-207ENST00000478913 LAG3P18627 525 aa6.16□□□□□ -1.42
CCDC171-207ENST00000478913 SLC7A1P30825 629 aa6.16□□□□□ -1.42
CCDC171-207ENST00000478913 DDR1Q08345 913 aa6.16□□□□□ -1.42
CCDC171-207ENST00000478913 HABP2Q14520 560 aaPredicted RBP6.16□□□□□ -1.42
CCDC171-207ENST00000478913 LSM12Q3MHD2 195 aaKnown RBP6.16□□□□□ -1.42
CCDC171-207ENST00000478913 SPDYE7PQ495Y7 208 aa6.16□□□□□ -1.42
CCDC171-207ENST00000478913 CRB2Q5IJ48 1285 aa6.16□□□□□ -1.42
CCDC171-207ENST00000478913 MIIPQ5JXC2 388 aa6.16□□□□□ -1.42
CCDC171-207ENST00000478913 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.16□□□□□ -1.42
CCDC171-207ENST00000478913 LRRC55Q6ZSA7 311 aa6.16□□□□□ -1.42
CCDC171-207ENST00000478913 USP50Q70EL3 339 aaPredicted RBP6.16□□□□□ -1.42
CCDC171-207ENST00000478913 FAM43AQ8N2R8 423 aa6.16□□□□□ -1.42
CCDC171-207ENST00000478913 CPEB3Q8NE35 698 aaKnown RBP6.16□□□□□ -1.42
CCDC171-207ENST00000478913 SMOQ99835 787 aa6.16□□□□□ -1.42
CCDC171-207ENST00000478913 VKORC1Q9BQB6 163 aa6.16□□□□□ -1.42
CCDC171-207ENST00000478913 CNPPD1Q9BV87 410 aa6.16□□□□□ -1.42
CCDC171-207ENST00000478913 BHMT2Q9H2M3 363 aa6.16□□□□□ -1.42
CCDC171-207ENST00000478913 NRDE2Q9H7Z3 1164 aa6.16□□□□□ -1.42
CCDC171-207ENST00000478913 HSFX1Q9UBD0 423 aa6.16□□□□□ -1.42
CCDC171-207ENST00000478913 KCNE5Q9UJ90 142 aa6.16□□□□□ -1.42
CCDC171-207ENST00000478913 MAP3K2Q9Y2U5 619 aa6.16□□□□□ -1.42
CCDC171-207ENST00000478913 REXO2Q9Y3B8 237 aaKnown RBP6.16□□□□□ -1.42
CCDC171-207ENST00000478913 NOX1Q9Y5S8 564 aa6.16□□□□□ -1.42
CCDC171-207ENST00000478913 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.16□□□□□ -1.42
CCDC171-207ENST00000478913 CCDC7Q96M83 1385 aa6.16□□□□□ -1.42
CCDC171-207ENST00000478913 NR4A1P22736 598 aa6.15□□□□□ -1.42
CCDC171-207ENST00000478913 PEX2P28328 305 aa6.15□□□□□ -1.42
CCDC171-207ENST00000478913 POLD3Q15054 466 aaPredicted RBP6.15□□□□□ -1.42
CCDC171-207ENST00000478913 BEAN1Q3B7T3 259 aa6.15□□□□□ -1.42
CCDC171-207ENST00000478913 TIGD2Q4W5G0 525 aa6.15□□□□□ -1.42
CCDC171-207ENST00000478913 APOA5Q6Q788 366 aa6.15□□□□□ -1.42
CCDC171-207ENST00000478913 KSR2Q6VAB6 950 aa6.15□□□□□ -1.42
CCDC171-207ENST00000478913 USP37Q86T82 979 aa6.15□□□□□ -1.42
CCDC171-207ENST00000478913 CFAP52Q8N1V2 620 aa6.15□□□□□ -1.42
CCDC171-207ENST00000478913 TMEM132CQ8N3T6 1108 aa6.15□□□□□ -1.42
CCDC171-207ENST00000478913 IL31RAQ8NI17 732 aa6.15□□□□□ -1.42
CCDC171-207ENST00000478913 ZNF622Q969S3 477 aaKnown RBP eCLIP6.15□□□□□ -1.42
CCDC171-207ENST00000478913 RNF31Q96EP0 1072 aa6.15□□□□□ -1.42
CCDC171-207ENST00000478913 ZNF341Q9BYN7 854 aa6.15□□□□□ -1.42
CCDC171-207ENST00000478913 VPS11Q9H270 941 aa6.15□□□□□ -1.42
CCDC171-207ENST00000478913 TPCN1Q9ULQ1 816 aa6.15□□□□□ -1.42
CCDC171-207ENST00000478913 AGAP1Q9UPQ3 857 aa6.15□□□□□ -1.42
CCDC171-207ENST00000478913 MYRFQ9Y2G1 1151 aa6.15□□□□□ -1.42
CCDC171-207ENST00000478913 MED16Q9Y2X0 877 aa6.15□□□□□ -1.42
CCDC171-207ENST00000478913 RBBP6Q7Z6E9 1792 aaKnown RBP6.15□□□□□ -1.43
CCDC171-207ENST00000478913 DCHS1Q96JQ0 3298 aa6.14□□□□□ -1.43
CCDC171-207ENST00000478913 LY75O60449 1722 aa6.14□□□□□ -1.43
CCDC171-207ENST00000478913 CCDC195A0A1B0GUA6 201 aa6.14□□□□□ -1.43
CCDC171-207ENST00000478913 MARCH11A6NNE9 402 aa6.14□□□□□ -1.43
CCDC171-207ENST00000478913 POLRMTO00411 1230 aaKnown RBP6.14□□□□□ -1.43
CCDC171-207ENST00000478913 FRS3O43559 492 aa6.14□□□□□ -1.43
CCDC171-207ENST00000478913 CDKL5O76039 1030 aa6.14□□□□□ -1.43
CCDC171-207ENST00000478913 KIF20AO95235 890 aa6.14□□□□□ -1.43
CCDC171-207ENST00000478913 DDX6P26196 483 aaKnown RBP eCLIP6.14□□□□□ -1.43
CCDC171-207ENST00000478913 RFC4P35249 363 aa6.14□□□□□ -1.43
CCDC171-207ENST00000478913 CXADRP78310 365 aa6.14□□□□□ -1.43
CCDC171-207ENST00000478913 POU6F2P78424 691 aaPredicted RBP6.14□□□□□ -1.43
CCDC171-207ENST00000478913 PURAQ00577 322 aaKnown RBP6.14□□□□□ -1.43
CCDC171-207ENST00000478913 RESTQ13127 1097 aa6.14□□□□□ -1.43
CCDC171-207ENST00000478913 B3GNTL1Q67FW5 361 aaPredicted RBP6.14□□□□□ -1.43
CCDC171-207ENST00000478913 CCSAPQ6IQ19 270 aaPredicted RBP6.14□□□□□ -1.43
CCDC171-207ENST00000478913 ARMC6Q6NXE6 501 aa6.14□□□□□ -1.43
CCDC171-207ENST00000478913 TAPT1Q6NXT6 567 aa6.14□□□□□ -1.43
CCDC171-207ENST00000478913 ZNF783Q6ZMS7 281 aa6.14□□□□□ -1.43
CCDC171-207ENST00000478913 DBX2Q6ZNG2 339 aa6.14□□□□□ -1.43
CCDC171-207ENST00000478913 GPC2Q8N158 579 aa6.14□□□□□ -1.43
CCDC171-207ENST00000478913 NSUN7Q8NE18 718 aaKnown RBP6.14□□□□□ -1.43
CCDC171-207ENST00000478913 OR6B3Q8NGW1 331 aa6.14□□□□□ -1.43
CCDC171-207ENST00000478913 CD99L2Q8TCZ2 262 aa6.14□□□□□ -1.43
CCDC171-207ENST00000478913 KBTBD7Q8WVZ9 684 aa6.14□□□□□ -1.43
CCDC171-207ENST00000478913 HAS1Q92839 578 aa6.14□□□□□ -1.43
CCDC171-207ENST00000478913 MYEOVQ96EZ4 313 aa6.14□□□□□ -1.43
CCDC171-207ENST00000478913 TRIB1Q96RU8 372 aa6.14□□□□□ -1.43
CCDC171-207ENST00000478913 SARGQ9BW04 601 aa6.14□□□□□ -1.43
CCDC171-207ENST00000478913 ALOXE3Q9BYJ1 711 aa6.14□□□□□ -1.43
CCDC171-207ENST00000478913 LRRC27Q9C0I9 530 aa6.14□□□□□ -1.43
CCDC171-207ENST00000478913 GBA2Q9HCG7 927 aaPredicted RBP6.14□□□□□ -1.43
CCDC171-207ENST00000478913 SLC2A4RGQ9NR83 387 aa6.14□□□□□ -1.43
CCDC171-207ENST00000478913 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.14□□□□□ -1.43
CCDC171-207ENST00000478913 SRRDQ9UH36 339 aa6.14□□□□□ -1.43
CCDC171-207ENST00000478913 FZD1Q9UP38 647 aa6.14□□□□□ -1.43
CCDC171-207ENST00000478913 FAM50BQ9Y247 325 aa6.14□□□□□ -1.43
CCDC171-207ENST00000478913 NEU2Q9Y3R4 380 aa6.14□□□□□ -1.43
CCDC171-207ENST00000478913 PCDHGB6Q9Y5F9 930 aa6.14□□□□□ -1.43
CCDC171-207ENST00000478913 TRPM7Q96QT4 1865 aa6.13□□□□□ -1.43
CCDC171-207ENST00000478913 H0YIN7 160 aa6.13□□□□□ -1.43
CCDC171-207ENST00000478913 TOR1BO14657 336 aa6.13□□□□□ -1.43
CCDC171-207ENST00000478913 DNAJB5O75953 348 aa6.13□□□□□ -1.43
CCDC171-207ENST00000478913 UNC5CO95185 931 aa6.13□□□□□ -1.43
CCDC171-207ENST00000478913 MYL1P05976 194 aa6.13□□□□□ -1.43
CCDC171-207ENST00000478913 KCNA2P16389 499 aa6.13□□□□□ -1.43
CCDC171-207ENST00000478913 ZFP36P26651 326 aaKnown RBP6.13□□□□□ -1.43
CCDC171-207ENST00000478913 BMPR1AP36894 532 aa6.13□□□□□ -1.43
CCDC171-207ENST00000478913 SEMA5AQ13591 1074 aa6.13□□□□□ -1.43
CCDC171-207ENST00000478913 PUM1Q14671 1186 aaKnown RBP eCLIP6.13□□□□□ -1.43
CCDC171-207ENST00000478913 ZXDCQ2QGD7 858 aaPredicted RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms