RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 RAPGEF1Q13905 1077 aa28.32■■■□□ 2.12
CCM2-211ENST00000478582 SUGP1Q8IWZ8 645 aaKnown RBP28.32■■■□□ 2.12
CCM2-211ENST00000478582 SLC44A3Q8N4M1 653 aa28.32■■■□□ 2.12
CCM2-211ENST00000478582 RNF214Q8ND24 703 aa28.32■■■□□ 2.12
CCM2-211ENST00000478582 STKLD1Q8NE28 680 aa28.32■■■□□ 2.12
CCM2-211ENST00000478582 SHKBP1Q8TBC3 707 aa28.32■■■□□ 2.12
CCM2-211ENST00000478582 FGF13Q92913 245 aa28.32■■■□□ 2.12
CCM2-211ENST00000478582 HESX1Q9UBX0 185 aa28.32■■■□□ 2.12
CCM2-211ENST00000478582 MAGED2Q9UNF1 606 aaPredicted RBP28.32■■■□□ 2.12
CCM2-211ENST00000478582 DUSP12Q9UNI6 340 aa28.32■■■□□ 2.12
CCM2-211ENST00000478582 WDR3Q9UNX4 943 aaKnown RBP eCLIP28.32■■■□□ 2.12
CCM2-211ENST00000478582 HHLA1C9JL84 531 aa28.31■■■□□ 2.12
CCM2-211ENST00000478582 RTN3O95197 1032 aaPredicted RBP28.31■■■□□ 2.12
CCM2-211ENST00000478582 GABRR2P28476 465 aa28.31■■■□□ 2.12
CCM2-211ENST00000478582 USP8P40818 1118 aa28.31■■■□□ 2.12
CCM2-211ENST00000478582 POLR2FP61218 127 aaKnown RBP28.31■■■□□ 2.12
CCM2-211ENST00000478582 GOLGA7BQ2TAP0 167 aa28.31■■■□□ 2.12
CCM2-211ENST00000478582 PKDCCQ504Y2 493 aa28.31■■■□□ 2.12
CCM2-211ENST00000478582 TTC30AQ86WT1 665 aa28.31■■■□□ 2.12
CCM2-211ENST00000478582 GDE1Q9NZC3 331 aa28.31■■■□□ 2.12
CCM2-211ENST00000478582 NRG2O14511 850 aaPredicted RBP28.3■■■□□ 2.12
CCM2-211ENST00000478582 CEBPBP17676 345 aa28.3■■■□□ 2.12
CCM2-211ENST00000478582 BRD2P25440 801 aaKnown RBP28.3■■■□□ 2.12
CCM2-211ENST00000478582 CLCN1P35523 988 aa28.3■■■□□ 2.12
CCM2-211ENST00000478582 BCAT1P54687 386 aa28.3■■■□□ 2.12
CCM2-211ENST00000478582 USP46P62068 366 aa28.3■■■□□ 2.12
CCM2-211ENST00000478582 MEA1Q16626 185 aa28.3■■■□□ 2.12
CCM2-211ENST00000478582 TMEM150AQ86TG1 271 aa28.3■■■□□ 2.12
CCM2-211ENST00000478582 NPAS3Q8IXF0 933 aa28.3■■■□□ 2.12
CCM2-211ENST00000478582 ANP32EQ9BTT0 268 aa28.3■■■□□ 2.12
CCM2-211ENST00000478582 A0A1W2PRU2 124 aa28.29■■■□□ 2.12
CCM2-211ENST00000478582 FAM92AA1XBS5 289 aa28.29■■■□□ 2.12
CCM2-211ENST00000478582 F8VZ95 297 aa28.29■■■□□ 2.12
CCM2-211ENST00000478582 CYP26A1O43174 497 aa28.29■■■□□ 2.12
CCM2-211ENST00000478582 MED7O43513 233 aa28.29■■■□□ 2.12
CCM2-211ENST00000478582 GNA15P30679 374 aa28.29■■■□□ 2.12
CCM2-211ENST00000478582 SLC5A3P53794 718 aa28.29■■■□□ 2.12
CCM2-211ENST00000478582 JAM2P57087 298 aa28.29■■■□□ 2.12
CCM2-211ENST00000478582 SLC8A3P57103 927 aa28.29■■■□□ 2.12
CCM2-211ENST00000478582 BPIFB4P59827 614 aa28.29■■■□□ 2.12
CCM2-211ENST00000478582 PTK2Q05397 1052 aa28.29■■■□□ 2.12
CCM2-211ENST00000478582 HTR4Q13639 388 aa28.29■■■□□ 2.12
CCM2-211ENST00000478582 ZNF606Q8WXB4 792 aa28.29■■■□□ 2.12
CCM2-211ENST00000478582 KCNH6Q9H252 994 aa28.29■■■□□ 2.12
CCM2-211ENST00000478582 ATXN3LQ9H3M9 355 aa28.29■■■□□ 2.12
CCM2-211ENST00000478582 ZNF318Q5VUA4 2279 aa28.29■■■□□ 2.12
CCM2-211ENST00000478582 SOBPA7XYQ1 873 aa28.28■■■□□ 2.12
CCM2-211ENST00000478582 PDGFBP01127 241 aaPredicted RBP28.28■■■□□ 2.12
CCM2-211ENST00000478582 CALCAP01258 141 aa28.28■■■□□ 2.12
CCM2-211ENST00000478582 SETSIPP0DME0 302 aa28.28■■■□□ 2.12
CCM2-211ENST00000478582 BST2Q10589 180 aaKnown RBP28.28■■■□□ 2.12
CCM2-211ENST00000478582 TEAD2Q15562 447 aa28.28■■■□□ 2.12
CCM2-211ENST00000478582 ING5Q8WYH8 240 aa28.28■■■□□ 2.12
CCM2-211ENST00000478582 GCNAQ96QF7 691 aa28.28■■■□□ 2.12
CCM2-211ENST00000478582 ACP6Q9NPH0 428 aa28.28■■■□□ 2.12
CCM2-211ENST00000478582 NLRC4Q9NPP4 1024 aa28.28■■■□□ 2.12
CCM2-211ENST00000478582 ZMYM5Q9UJ78 669 aa28.28■■■□□ 2.12
CCM2-211ENST00000478582 GREB1Q4ZG55 1949 aa28.28■■■□□ 2.12
CCM2-211ENST00000478582 XPO1O14980 1071 aaKnown RBP28.27■■■□□ 2.12
CCM2-211ENST00000478582 NARSO43776 548 aaKnown RBP28.27■■■□□ 2.12
CCM2-211ENST00000478582 PNMA6AP0CW24 399 aaPredicted RBP28.27■■■□□ 2.12
CCM2-211ENST00000478582 GJA1P17302 382 aa28.27■■■□□ 2.12
CCM2-211ENST00000478582 YWHAQP27348 245 aa28.27■■■□□ 2.12
CCM2-211ENST00000478582 PBX1P40424 430 aa28.27■■■□□ 2.12
CCM2-211ENST00000478582 PPP3CCP48454 512 aa28.27■■■□□ 2.12
CCM2-211ENST00000478582 PDE4CQ08493 712 aa28.27■■■□□ 2.12
CCM2-211ENST00000478582 POTEHQ6S545 545 aa28.27■■■□□ 2.12
CCM2-211ENST00000478582 SCAMP5Q8TAC9 235 aa28.27■■■□□ 2.12
CCM2-211ENST00000478582 OVCA2Q8WZ82 227 aa28.27■■■□□ 2.12
CCM2-211ENST00000478582 FBXO44Q9H4M3 255 aa28.27■■■□□ 2.12
CCM2-211ENST00000478582 IFNKQ9P0W0 207 aa28.27■■■□□ 2.12
CCM2-211ENST00000478582 NUMBLQ9Y6R0 609 aa28.27■■■□□ 2.12
CCM2-211ENST00000478582 TADA3O75528 432 aa28.26■■■□□ 2.11
CCM2-211ENST00000478582 PLA2G4AP47712 749 aa28.26■■■□□ 2.11
CCM2-211ENST00000478582 ARHGAP15Q53QZ3 475 aa28.26■■■□□ 2.11
CCM2-211ENST00000478582 RAB41Q5JT25 222 aa28.26■■■□□ 2.11
CCM2-211ENST00000478582 MTSS1LQ765P7 747 aa28.26■■■□□ 2.11
CCM2-211ENST00000478582 PIGZQ86VD9 579 aa28.26■■■□□ 2.11
CCM2-211ENST00000478582 UBA3Q8TBC4 463 aa28.26■■■□□ 2.11
CCM2-211ENST00000478582 SLC35F5Q8WV83 523 aa28.26■■■□□ 2.11
CCM2-211ENST00000478582 FGF14Q92915 247 aa28.26■■■□□ 2.11
CCM2-211ENST00000478582 MCRS1Q96EZ8 462 aa28.26■■■□□ 2.11
CCM2-211ENST00000478582 NCANO14594 1321 aa28.25■■■□□ 2.11
CCM2-211ENST00000478582 THAP12O43422 761 aa28.25■■■□□ 2.11
CCM2-211ENST00000478582 SRFP11831 508 aa28.25■■■□□ 2.11
CCM2-211ENST00000478582 DDX6P26196 483 aaKnown RBP eCLIP28.25■■■□□ 2.11
CCM2-211ENST00000478582 SOX5P35711 763 aa28.25■■■□□ 2.11
CCM2-211ENST00000478582 KIF11P52732 1056 aa28.25■■■□□ 2.11
CCM2-211ENST00000478582 TAF10Q12962 218 aa28.25■■■□□ 2.11
CCM2-211ENST00000478582 PARM1Q6UWI2 310 aa28.25■■■□□ 2.11
CCM2-211ENST00000478582 GPRIN1Q7Z2K8 1008 aa28.25■■■□□ 2.11
CCM2-211ENST00000478582 SLC47A2Q86VL8 602 aa28.25■■■□□ 2.11
CCM2-211ENST00000478582 KCTD13Q8WZ19 329 aa28.25■■■□□ 2.11
CCM2-211ENST00000478582 SLITRK1Q96PX8 696 aa28.25■■■□□ 2.11
CCM2-211ENST00000478582 SPAG5Q96R06 1193 aa28.25■■■□□ 2.11
CCM2-211ENST00000478582 TASP1Q9H6P5 420 aa28.25■■■□□ 2.11
CCM2-211ENST00000478582 PCDHGC3Q9UN70 934 aa28.25■■■□□ 2.11
CCM2-211ENST00000478582 USP3Q9Y6I4 520 aa28.25■■■□□ 2.11
CCM2-211ENST00000478582 PATJQ8NI35 1801 aa28.25■■■□□ 2.11
CCM2-211ENST00000478582 M0QYV0 167 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms