RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 ANXA1P04083 346 aa4.9□□□□□ -1.63
CDC42BPA-212ENST00000478573 HNRNPCP07910 306 aaKnown RBP eCLIP4.9□□□□□ -1.635e-6■■■□□ 16.4
CDC42BPA-212ENST00000478573 GNAI3P08754 354 aa4.9□□□□□ -1.63
CDC42BPA-212ENST00000478573 SETSIPP0DME0 302 aa4.9□□□□□ -1.63
CDC42BPA-212ENST00000478573 KITP10721 976 aa4.9□□□□□ -1.63
CDC42BPA-212ENST00000478573 CHRM3P20309 590 aa4.9□□□□□ -1.63
CDC42BPA-212ENST00000478573 NDUFV1P49821 464 aa4.9□□□□□ -1.63
CDC42BPA-212ENST00000478573 CCT8P50990 548 aa4.9□□□□□ -1.63
CDC42BPA-212ENST00000478573 SOX8P57073 446 aa4.9□□□□□ -1.63
CDC42BPA-212ENST00000478573 GNAI1P63096 354 aa4.9□□□□□ -1.63
CDC42BPA-212ENST00000478573 TAP2Q03519 686 aa4.9□□□□□ -1.63
CDC42BPA-212ENST00000478573 SLC10A2Q12908 348 aaPredicted RBP4.9□□□□□ -1.63
CDC42BPA-212ENST00000478573 DGKKQ5KSL6 1271 aa4.9□□□□□ -1.63
CDC42BPA-212ENST00000478573 CELF5Q8N6W0 485 aaKnown RBP4.9□□□□□ -1.63
CDC42BPA-212ENST00000478573 ZNF366Q8N895 744 aa4.9□□□□□ -1.63
CDC42BPA-212ENST00000478573 ENAHQ8N8S7 591 aaPredicted RBP4.9□□□□□ -1.63
CDC42BPA-212ENST00000478573 FKBP10Q96AY3 582 aa4.9□□□□□ -1.63
CDC42BPA-212ENST00000478573 NMD3Q96D46 503 aaKnown RBP4.9□□□□□ -1.63
CDC42BPA-212ENST00000478573 SELENOOQ9BVL4 669 aa4.9□□□□□ -1.63
CDC42BPA-212ENST00000478573 COLEC11Q9BWP8 271 aa4.9□□□□□ -1.63
CDC42BPA-212ENST00000478573 SMOC2Q9H3U7 446 aa4.9□□□□□ -1.63
CDC42BPA-212ENST00000478573 BRD9Q9H8M2 597 aa4.9□□□□□ -1.63
CDC42BPA-212ENST00000478573 ZNF287Q9HBT7 754 aa4.9□□□□□ -1.63
CDC42BPA-212ENST00000478573 STARD7Q9NQZ5 370 aa4.9□□□□□ -1.63
CDC42BPA-212ENST00000478573 FNIP2Q9P278 1114 aa4.9□□□□□ -1.63
CDC42BPA-212ENST00000478573 CFAP97Q9P2B7 532 aa4.9□□□□□ -1.63
CDC42BPA-212ENST00000478573 RGS17Q9UGC6 210 aaPredicted RBP4.9□□□□□ -1.63
CDC42BPA-212ENST00000478573 OGDHLQ9ULD0 1010 aa4.9□□□□□ -1.63
CDC42BPA-212ENST00000478573 PAXBP1Q9Y5B6 917 aa4.9□□□□□ -1.63
CDC42BPA-212ENST00000478573 DISP1Q96F81 1524 aa4.9□□□□□ -1.63
CDC42BPA-212ENST00000478573 ABCA8O94911 1581 aa4.9□□□□□ -1.63
CDC42BPA-212ENST00000478573 GLI2P10070 1586 aa4.9□□□□□ -1.63
CDC42BPA-212ENST00000478573 EFCAB5A4FU69 1503 aa4.89□□□□□ -1.63
CDC42BPA-212ENST00000478573 KPNA5O15131 536 aa4.89□□□□□ -1.63
CDC42BPA-212ENST00000478573 VPS4BO75351 444 aa4.89□□□□□ -1.63
CDC42BPA-212ENST00000478573 RARBP10826 455 aa4.89□□□□□ -1.63
CDC42BPA-212ENST00000478573 BRAFP15056 766 aa4.89□□□□□ -1.63
CDC42BPA-212ENST00000478573 TSHRP16473 764 aa4.89□□□□□ -1.63
CDC42BPA-212ENST00000478573 HDCP19113 662 aa4.89□□□□□ -1.63
CDC42BPA-212ENST00000478573 DRD4P21917 467 aa4.89□□□□□ -1.63
CDC42BPA-212ENST00000478573 ZNF135P52742 658 aaPredicted RBP4.89□□□□□ -1.63
CDC42BPA-212ENST00000478573 MTX3Q5HYI7 312 aa4.89□□□□□ -1.63
CDC42BPA-212ENST00000478573 ZNF782Q6ZMW2 699 aaPredicted RBP4.89□□□□□ -1.63
CDC42BPA-212ENST00000478573 TMPRSS9Q7Z410 1059 aa4.89□□□□□ -1.63
CDC42BPA-212ENST00000478573 SESTD1Q86VW0 696 aa4.89□□□□□ -1.63
CDC42BPA-212ENST00000478573 ACRBPQ8NEB7 543 aa4.89□□□□□ -1.63
CDC42BPA-212ENST00000478573 TNPO1Q92973 898 aaKnown RBP4.89□□□□□ -1.63
CDC42BPA-212ENST00000478573 RIPOR3Q96MK2 946 aa4.89□□□□□ -1.63
CDC42BPA-212ENST00000478573 ALG8Q9BVK2 526 aa4.89□□□□□ -1.63
CDC42BPA-212ENST00000478573 GPR35Q9HC97 309 aa4.89□□□□□ -1.63
CDC42BPA-212ENST00000478573 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.89□□□□□ -1.63
CDC42BPA-212ENST00000478573 STK32BQ9NY57 414 aa4.89□□□□□ -1.63
CDC42BPA-212ENST00000478573 EHD3Q9NZN3 535 aa4.89□□□□□ -1.63
CDC42BPA-212ENST00000478573 AFF4Q9UHB7 1163 aaKnown RBP4.89□□□□□ -1.63
CDC42BPA-212ENST00000478573 CORO2BQ9UQ03 480 aa4.89□□□□□ -1.63
CDC42BPA-212ENST00000478573 RAPGEF6Q8TEU7 1601 aa4.89□□□□□ -1.63
CDC42BPA-212ENST00000478573 IL18RAPO95256 599 aa4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 THP07101 528 aa4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 GJB1P08034 283 aa4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 PRR35P0CG20 571 aa4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 ZFXP17010 805 aaPredicted RBP4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 NDUFB7P17568 137 aa4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 TNFSF4P23510 183 aa4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 PHKA1P46020 1223 aa4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 SUMO3P55854 103 aaPredicted RBP4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 EXOSC9Q06265 439 aaKnown RBP4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 EIF2B5Q13144 721 aaKnown RBP4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 DAG1Q14118 895 aa4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 HABP2Q14520 560 aaPredicted RBP4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 PLAC9Q5JTB6 97 aa4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 FAM83BQ5T0W9 1011 aa4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 IZUMO3Q5VZ72 239 aa4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 ZNF425Q6IV72 752 aa4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 TAF2Q6P1X5 1199 aa4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 RNF152Q8N8N0 203 aa4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 PSD4Q8NDX1 1056 aa4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 OR6B3Q8NGW1 331 aa4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 POC1BQ8TC44 478 aa4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 BRI3BPQ8WY22 251 aa4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 SCAMP4Q969E2 229 aa4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 RFKQ969G6 155 aa4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 P2RX7Q99572 595 aaKnown RBP4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 SMURF2Q9HAU4 748 aa4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 PNPLA8Q9NP80 782 aa4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 MRPS18AQ9NVS2 196 aaKnown RBP4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 FLRT1Q9NZU1 646 aa4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 SH3BP4Q9P0V3 963 aa4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 CPNE7Q9UBL6 633 aa4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 DKK3Q9UBP4 350 aa4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 SNX13Q9Y5W8 968 aa4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 FNDC1Q4ZHG4 1894 aaPredicted RBP4.88□□□□□ -1.63
CDC42BPA-212ENST00000478573 TRIM43BA6NCK2 446 aa4.87□□□□□ -1.63
CDC42BPA-212ENST00000478573 ITGALP20701 1170 aa4.87□□□□□ -1.63
CDC42BPA-212ENST00000478573 STT3AP46977 705 aa4.87□□□□□ -1.63
CDC42BPA-212ENST00000478573 TCF15Q12870 199 aa4.87□□□□□ -1.63
CDC42BPA-212ENST00000478573 DHX8Q14562 1220 aaKnown RBP4.87□□□□□ -1.63
CDC42BPA-212ENST00000478573 TBCCQ15814 346 aa4.87□□□□□ -1.63
CDC42BPA-212ENST00000478573 GRAMD1BQ3KR37 738 aa4.87□□□□□ -1.63
CDC42BPA-212ENST00000478573 RBM20Q5T481 1227 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms