RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 NARSO43776 548 aaKnown RBP13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 LRRN2O75325 713 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 CCDC130P13994 396 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 GJA1P17302 382 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 AOC1P19801 751 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 SLC5A3P53794 718 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 CACNA2D1P54289 1103 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 MFAP3P55082 362 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 USP46P62068 366 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 TAF10Q12962 218 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 EXOC3L4Q17RC7 722 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 ANO6Q4KMQ2 910 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 SLC44A4Q53GD3 710 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 SGO2Q562F6 1265 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 TCP11X2Q5H9J9 407 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 SDHAF4Q5VUM1 108 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 CDKAL1Q5VV42 579 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 KLHDC10Q6PID8 442 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 TRIM65Q6PJ69 517 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 CCDC186Q7Z3E2 898 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 YAF2Q8IY57 180 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 PPM1KQ8N3J5 372 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 CDK5RAP1Q96SZ6 601 aaKnown RBP13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 KCNK16Q96T55 309 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 TUBGCP2Q9BSJ2 902 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 INTS2Q9H0H0 1204 aaKnown RBP13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 IRF2BPLQ9H1B7 796 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 NDST4Q9H3R1 872 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 BRD9Q9H8M2 597 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 APEX2Q9UBZ4 518 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 MRPS17Q9Y2R5 130 aaKnown RBP13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 HCN4Q9Y3Q4 1203 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 NFE2L3Q9Y4A8 694 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 USP3Q9Y6I4 520 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 TRIOO75962 3097 aa13.07□□□□□ -0.32
CLCNKA-205ENST00000477360 LRRC10BA6NIK2 292 aa13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 HHLA1C9JL84 531 aa13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 PRAMEF12O95522 483 aa13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 OAS1P00973 400 aaKnown RBP13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 CKMP06732 381 aa13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 SETSIPP0DME0 302 aa13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 HDCP19113 662 aa13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 VIPR2P41587 438 aa13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 KIF11P52732 1056 aa13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 BCAT1P54687 386 aa13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 CYP4F8P98187 520 aa13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 MYL5Q02045 173 aa13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 PDGFRLQ15198 375 aa13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 MLF2Q15773 248 aaPredicted RBP13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 CNGA2Q16280 664 aa13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 VWA3BQ502W6 1294 aa13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 RAB41Q5JT25 222 aa13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 STXBP5Q5T5C0 1151 aa13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 PPP1R26Q5T8A7 1209 aaPredicted RBP13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 TXNDC8Q6A555 127 aa13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 ASTLQ6HA08 431 aaPredicted RBP13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 LCLAT1Q6UWP7 414 aa13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 TADA2BQ86TJ2 420 aa13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 SIX5Q8N196 739 aa13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 SCML4Q8N228 414 aa13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 ARHGAP18Q8N392 663 aa13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 MAB21L3Q8N8X9 362 aa13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 USP13Q92995 863 aaPredicted RBP13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 FBXO32Q969P5 355 aa13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 ELMO3Q96BJ8 720 aa13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 IER2Q9BTL4 223 aa13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 PLA2G2FQ9BZM2 168 aa13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 MFSD1Q9H3U5 465 aa13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 C8orf33Q9H7E9 229 aaPredicted RBP13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 TLR8Q9NR97 1041 aaKnown RBP13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 FAM49BQ9NUQ9 324 aa13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 CLIC5Q9NZA1 410 aa13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 HESX1Q9UBX0 185 aa13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 NUP210Q8TEM1 1887 aaPredicted RBP13.06□□□□□ -0.32
CLCNKA-205ENST00000477360 KANSL1LA0AUZ9 987 aa13.05□□□□□ -0.32
CLCNKA-205ENST00000477360 KRBA1A5PL33 1030 aa13.05□□□□□ -0.32
CLCNKA-205ENST00000477360 FAM86C2PA6NEL3 165 aa13.05□□□□□ -0.32
CLCNKA-205ENST00000477360 KCNJ18B7U540 433 aa13.05□□□□□ -0.32
CLCNKA-205ENST00000477360 O00370 1275 aa13.05□□□□□ -0.32
CLCNKA-205ENST00000477360 XPO1O14980 1071 aaKnown RBP13.05□□□□□ -0.32
CLCNKA-205ENST00000477360 TPM2P07951 284 aa13.05□□□□□ -0.32
CLCNKA-205ENST00000477360 CFHP08603 1231 aa13.05□□□□□ -0.32
CLCNKA-205ENST00000477360 GDI1P31150 447 aa13.05□□□□□ -0.32
CLCNKA-205ENST00000477360 PLA2G4AP47712 749 aa13.05□□□□□ -0.32
CLCNKA-205ENST00000477360 ZNF165P49910 485 aa13.05□□□□□ -0.32
CLCNKA-205ENST00000477360 MAP3K7CLP57077 242 aa13.05□□□□□ -0.32
CLCNKA-205ENST00000477360 AMPD2Q01433 879 aa13.05□□□□□ -0.32
CLCNKA-205ENST00000477360 KCNJ12Q14500 433 aa13.05□□□□□ -0.32
CLCNKA-205ENST00000477360 IQCB1Q15051 598 aa13.05□□□□□ -0.32
CLCNKA-205ENST00000477360 PKDCCQ504Y2 493 aa13.05□□□□□ -0.32
CLCNKA-205ENST00000477360 MIIPQ5JXC2 388 aa13.05□□□□□ -0.32
CLCNKA-205ENST00000477360 HECTD3Q5T447 861 aa13.05□□□□□ -0.32
CLCNKA-205ENST00000477360 TMEM270Q6UE05 265 aa13.05□□□□□ -0.32
CLCNKA-205ENST00000477360 ZNF852Q6ZMS4 543 aa13.05□□□□□ -0.32
CLCNKA-205ENST00000477360 RALGPS2Q86X27 583 aaPredicted RBP13.05□□□□□ -0.32
CLCNKA-205ENST00000477360 ANKRD20A12PQ8NF67 263 aa13.05□□□□□ -0.32
CLCNKA-205ENST00000477360 KCTD13Q8WZ19 329 aa13.05□□□□□ -0.32
CLCNKA-205ENST00000477360 EXOC4Q96A65 974 aa13.05□□□□□ -0.32
CLCNKA-205ENST00000477360 FAM83CQ9BQN1 747 aa13.05□□□□□ -0.32
CLCNKA-205ENST00000477360 SMOC2Q9H3U7 446 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms