RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 TACC1O75410 805 aa12.42□□□□□ -0.42
VARS2-208ENST00000477052 CYP17A1P05093 508 aa12.42□□□□□ -0.42
VARS2-208ENST00000477052 SDHBP21912 280 aa12.42□□□□□ -0.42
VARS2-208ENST00000477052 DGKEP52429 567 aa12.42□□□□□ -0.42
VARS2-208ENST00000477052 DLG4P78352 724 aa12.42□□□□□ -0.42
VARS2-208ENST00000477052 AMPD2Q01433 879 aa12.42□□□□□ -0.42
VARS2-208ENST00000477052 STK4Q13043 487 aa12.42□□□□□ -0.42
VARS2-208ENST00000477052 BIRC3Q13489 604 aa12.42□□□□□ -0.42
VARS2-208ENST00000477052 MAPRE1Q15691 268 aaKnown RBP12.42□□□□□ -0.42
VARS2-208ENST00000477052 KNOP1Q1ED39 458 aaKnown RBP12.42□□□□□ -0.42
VARS2-208ENST00000477052 AASDHQ4L235 1098 aaPredicted RBP12.42□□□□□ -0.42
VARS2-208ENST00000477052 B3GALNT2Q8NCR0 500 aa12.42□□□□□ -0.42
VARS2-208ENST00000477052 SCAMP5Q8TAC9 235 aa12.42□□□□□ -0.42
VARS2-208ENST00000477052 NETO1Q8TDF5 533 aa12.42□□□□□ -0.42
VARS2-208ENST00000477052 WBP2Q969T9 261 aa12.42□□□□□ -0.42
VARS2-208ENST00000477052 TTLL2Q9BWV7 592 aa12.42□□□□□ -0.42
VARS2-208ENST00000477052 CFAP97Q9P2B7 532 aa12.42□□□□□ -0.42
VARS2-208ENST00000477052 CHORDC1Q9UHD1 332 aaPredicted RBP12.42□□□□□ -0.42
VARS2-208ENST00000477052 TRIM66O15016 1216 aa12.41□□□□□ -0.42
VARS2-208ENST00000477052 LRP3O75074 770 aa12.41□□□□□ -0.42
VARS2-208ENST00000477052 EPN2O95208 641 aa12.41□□□□□ -0.42
VARS2-208ENST00000477052 VNN1O95497 513 aa12.41□□□□□ -0.42
VARS2-208ENST00000477052 HSP90AA1P07900 732 aaKnown RBP12.41□□□□□ -0.42
VARS2-208ENST00000477052 PGFP49763 221 aa12.41□□□□□ -0.42
VARS2-208ENST00000477052 PLK5Q496M5 336 aa12.41□□□□□ -0.42
VARS2-208ENST00000477052 EMC10Q5UCC4 262 aa12.41□□□□□ -0.42
VARS2-208ENST00000477052 PAQR9Q6ZVX9 377 aa12.41□□□□□ -0.42
VARS2-208ENST00000477052 ACOT1Q86TX2 421 aa12.41□□□□□ -0.42
VARS2-208ENST00000477052 C12orf40Q86WS4 652 aa12.41□□□□□ -0.42
VARS2-208ENST00000477052 KIAA0895Q8NCT3 520 aa12.41□□□□□ -0.42
VARS2-208ENST00000477052 SNX21Q969T3 373 aa12.41□□□□□ -0.42
VARS2-208ENST00000477052 C8orf48Q96LL4 319 aa12.41□□□□□ -0.42
VARS2-208ENST00000477052 MED10Q9BTT4 135 aa12.41□□□□□ -0.42
VARS2-208ENST00000477052 DUSP15Q9H1R2 295 aaPredicted RBP12.41□□□□□ -0.42
VARS2-208ENST00000477052 FAM13BQ9NYF5 915 aa12.41□□□□□ -0.42
VARS2-208ENST00000477052 HMGXB4Q9UGU5 601 aa12.41□□□□□ -0.42
VARS2-208ENST00000477052 KIAA1549LQ6ZVL6 1849 aa12.41□□□□□ -0.42
VARS2-208ENST00000477052 SPAG17Q6Q759 2223 aa12.41□□□□□ -0.42
VARS2-208ENST00000477052 MYOFQ9NZM1 2061 aa12.41□□□□□ -0.42
VARS2-208ENST00000477052 UBE4BO95155 1302 aa12.4□□□□□ -0.42
VARS2-208ENST00000477052 A0A1B0GVL5 298 aa12.4□□□□□ -0.42
VARS2-208ENST00000477052 ACTN4O43707 911 aaKnown RBP12.4□□□□□ -0.42
VARS2-208ENST00000477052 NFATC1O95644 943 aa12.4□□□□□ -0.42
VARS2-208ENST00000477052 APBB3O95704 486 aa12.4□□□□□ -0.42
VARS2-208ENST00000477052 OAS1P00973 400 aaKnown RBP12.4□□□□□ -0.42
VARS2-208ENST00000477052 C4BPAP04003 597 aaKnown RBP12.4□□□□□ -0.42
VARS2-208ENST00000477052 MBL2P11226 248 aaPredicted RBP12.4□□□□□ -0.42
VARS2-208ENST00000477052 CCDC130P13994 396 aa12.4□□□□□ -0.42
VARS2-208ENST00000477052 HNRNPLP14866 589 aaKnown RBP eCLIP12.4□□□□□ -0.42
VARS2-208ENST00000477052 YWHAQP27348 245 aa12.4□□□□□ -0.42
VARS2-208ENST00000477052 GBP1P32455 592 aa12.4□□□□□ -0.42
VARS2-208ENST00000477052 NOP14P78316 857 aaKnown RBP12.4□□□□□ -0.42
VARS2-208ENST00000477052 KDSRQ06136 332 aa12.4□□□□□ -0.42
VARS2-208ENST00000477052 NR1H3Q13133 447 aa12.4□□□□□ -0.42
VARS2-208ENST00000477052 DHCR24Q15392 516 aa12.4□□□□□ -0.42
VARS2-208ENST00000477052 BMT2Q1RMZ1 405 aa12.4□□□□□ -0.42
VARS2-208ENST00000477052 ZNF699Q32M78 642 aa12.4□□□□□ -0.42
VARS2-208ENST00000477052 KMT5BQ4FZB7 885 aa12.4□□□□□ -0.42
VARS2-208ENST00000477052 SPOPLQ6IQ16 392 aa12.4□□□□□ -0.42
VARS2-208ENST00000477052 ANO7Q6IWH7 933 aa12.4□□□□□ -0.42
VARS2-208ENST00000477052 RHBDF2Q6PJF5 856 aa12.4□□□□□ -0.42
VARS2-208ENST00000477052 SYT13Q7L8C5 426 aa12.4□□□□□ -0.42
VARS2-208ENST00000477052 FAM35AQ86V20 835 aa12.4□□□□□ -0.42
VARS2-208ENST00000477052 HSCBQ8IWL3 235 aa12.4□□□□□ -0.42
VARS2-208ENST00000477052 CEP57L1Q8IYX8 460 aa12.4□□□□□ -0.42
VARS2-208ENST00000477052 ADGRG2Q8IZP9 1017 aa12.4□□□□□ -0.42
VARS2-208ENST00000477052 C12orf50Q8NA57 414 aaPredicted RBP12.4□□□□□ -0.42
VARS2-208ENST00000477052 USP33Q8TEY7 942 aa12.4□□□□□ -0.42
VARS2-208ENST00000477052 FBXO32Q969P5 355 aa12.4□□□□□ -0.42
VARS2-208ENST00000477052 ERLEC1Q96DZ1 483 aa12.4□□□□□ -0.42
VARS2-208ENST00000477052 PAGE5Q96GU1 130 aa12.4□□□□□ -0.42
VARS2-208ENST00000477052 CCSER2Q9H7U1 834 aa12.4□□□□□ -0.42
VARS2-208ENST00000477052 PVALEFA0A1B0GWK0 134 aa12.39□□□□□ -0.43
VARS2-208ENST00000477052 COCHO43405 550 aa12.39□□□□□ -0.43
VARS2-208ENST00000477052 KRT37O76014 449 aa12.39□□□□□ -0.43
VARS2-208ENST00000477052 BEST1O76090 585 aa12.39□□□□□ -0.43
VARS2-208ENST00000477052 ZNF806P0C7X5 589 aa12.39□□□□□ -0.43
VARS2-208ENST00000477052 IRF1P10914 325 aa12.39□□□□□ -0.43
VARS2-208ENST00000477052 BCKDHBP21953 392 aa12.39□□□□□ -0.43
VARS2-208ENST00000477052 TIE1P35590 1138 aa12.39□□□□□ -0.43
VARS2-208ENST00000477052 MPLP40238 635 aa12.39□□□□□ -0.43
VARS2-208ENST00000477052 SLC7A9P82251 487 aa12.39□□□□□ -0.43
VARS2-208ENST00000477052 CREB5Q02930 508 aa12.39□□□□□ -0.43
VARS2-208ENST00000477052 NCOA4Q13772 614 aa12.39□□□□□ -0.43
VARS2-208ENST00000477052 FBXO43Q4G163 708 aa12.39□□□□□ -0.43
VARS2-208ENST00000477052 TMEM92Q6UXU6 159 aa12.39□□□□□ -0.43
VARS2-208ENST00000477052 ABCA7Q8IZY2 2146 aa12.39□□□□□ -0.43
VARS2-208ENST00000477052 NUP93Q8N1F7 819 aa12.39□□□□□ -0.43
VARS2-208ENST00000477052 CAMKK1Q8N5S9 505 aa12.39□□□□□ -0.43
VARS2-208ENST00000477052 ALLCQ8N6M5 410 aa12.39□□□□□ -0.43
VARS2-208ENST00000477052 FRMD1Q8N878 549 aa12.39□□□□□ -0.43
VARS2-208ENST00000477052 NAT16Q8N8M0 369 aa12.39□□□□□ -0.43
VARS2-208ENST00000477052 TSTD1Q8NFU3 115 aa12.39□□□□□ -0.43
VARS2-208ENST00000477052 PARD3BQ8TEW8 1205 aa12.39□□□□□ -0.43
VARS2-208ENST00000477052 SYAP1Q96A49 352 aaPredicted RBP12.39□□□□□ -0.43
VARS2-208ENST00000477052 JAKMIP2Q96AA8 810 aa12.39□□□□□ -0.43
VARS2-208ENST00000477052 ELOVL4Q9GZR5 314 aa12.39□□□□□ -0.43
VARS2-208ENST00000477052 MAGEF1Q9HAY2 307 aa12.39□□□□□ -0.43
VARS2-208ENST00000477052 FAM49BQ9NUQ9 324 aa12.39□□□□□ -0.43
VARS2-208ENST00000477052 EXOC1Q9NV70 894 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms