RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 POMGNT1Q8WZA1 660 aa11.21□□□□□ -0.61
CALD1-217ENST00000475772 GCNAQ96QF7 691 aa11.21□□□□□ -0.61
CALD1-217ENST00000475772 ACBD6Q9BR61 282 aa11.21□□□□□ -0.61
CALD1-217ENST00000475772 FGFBP2Q9BYJ0 223 aa11.21□□□□□ -0.61
CALD1-217ENST00000475772 LINC00597Q9H2U6 94 aa11.21□□□□□ -0.61
CALD1-217ENST00000475772 DDX43Q9NXZ2 648 aaKnown RBP11.21□□□□□ -0.61
CALD1-217ENST00000475772 GCNT4Q9P109 453 aa11.21□□□□□ -0.61
CALD1-217ENST00000475772 SIX4Q9UIU6 781 aa11.21□□□□□ -0.61
CALD1-217ENST00000475772 AGAP1Q9UPQ3 857 aa11.21□□□□□ -0.61
CALD1-217ENST00000475772 SLC8A2Q9UPR5 921 aa11.21□□□□□ -0.61
CALD1-217ENST00000475772 FOXD2O60548 495 aaPredicted RBP11.2□□□□□ -0.62
CALD1-217ENST00000475772 ATG13O75143 517 aa11.2□□□□□ -0.62
CALD1-217ENST00000475772 TBCAO75347 108 aaKnown RBP11.2□□□□□ -0.62
CALD1-217ENST00000475772 ITGB3P05106 788 aa11.2□□□□□ -0.62
CALD1-217ENST00000475772 KRT18P05783 430 aaKnown RBP11.2□□□□□ -0.62
CALD1-217ENST00000475772 DRD1P21728 446 aa11.2□□□□□ -0.62
CALD1-217ENST00000475772 CASP5P51878 434 aa11.2□□□□□ -0.62
CALD1-217ENST00000475772 FAM160A1Q05DH4 1040 aa11.2□□□□□ -0.62
CALD1-217ENST00000475772 BFSP1Q12934 665 aa11.2□□□□□ -0.62
CALD1-217ENST00000475772 MTF1Q14872 753 aa11.2□□□□□ -0.62
CALD1-217ENST00000475772 POSTNQ15063 836 aa11.2□□□□□ -0.62
CALD1-217ENST00000475772 GAB4Q2WGN9 574 aa11.2□□□□□ -0.62
CALD1-217ENST00000475772 EML3Q32P44 896 aa11.2□□□□□ -0.62
CALD1-217ENST00000475772 SV2CQ496J9 727 aa11.2□□□□□ -0.62
CALD1-217ENST00000475772 STPG1Q5TH74 334 aa11.2□□□□□ -0.62
CALD1-217ENST00000475772 LARP1BQ659C4 914 aaKnown RBP11.2□□□□□ -0.62
CALD1-217ENST00000475772 TCEAL6Q6IPX3 200 aa11.2□□□□□ -0.62
CALD1-217ENST00000475772 FAM171BQ6P995 826 aa11.2□□□□□ -0.62
CALD1-217ENST00000475772 BRSK2Q8IWQ3 736 aa11.2□□□□□ -0.62
CALD1-217ENST00000475772 OSCP1Q8WVF1 389 aa11.2□□□□□ -0.62
CALD1-217ENST00000475772 MRPS31Q92665 395 aaKnown RBP11.2□□□□□ -0.62
CALD1-217ENST00000475772 TCEAL3Q969E4 200 aa11.2□□□□□ -0.62
CALD1-217ENST00000475772 SAAL1Q96ER3 474 aa11.2□□□□□ -0.62
CALD1-217ENST00000475772 TRMT2BQ96GJ1 504 aaKnown RBP11.2□□□□□ -0.62
CALD1-217ENST00000475772 HHIPQ96QV1 700 aa11.2□□□□□ -0.62
CALD1-217ENST00000475772 P2RY13Q9BPV8 354 aa11.2□□□□□ -0.62
CALD1-217ENST00000475772 FAM213AQ9BRX8 229 aa11.2□□□□□ -0.62
CALD1-217ENST00000475772 LSM14BQ9BX40 385 aaKnown RBP11.2□□□□□ -0.62
CALD1-217ENST00000475772 KIF9Q9HAQ2 790 aa11.2□□□□□ -0.62
CALD1-217ENST00000475772 TBC1D7Q9P0N9 293 aa11.2□□□□□ -0.62
CALD1-217ENST00000475772 KIF3AQ9Y496 699 aa11.2□□□□□ -0.62
CALD1-217ENST00000475772 CLIC4Q9Y696 253 aa11.2□□□□□ -0.62
CALD1-217ENST00000475772 CACNA1GO43497 2377 aa11.2□□□□□ -0.62
CALD1-217ENST00000475772 GOLGA8IPA6NC78 632 aa11.19□□□□□ -0.62
CALD1-217ENST00000475772 C2orf78A6NCI8 922 aa11.19□□□□□ -0.62
CALD1-217ENST00000475772 GOLGA8JA6NMD2 632 aa11.19□□□□□ -0.62
CALD1-217ENST00000475772 ATP2C2O75185 946 aa11.19□□□□□ -0.62
CALD1-217ENST00000475772 AKAP3O75969 853 aa11.19□□□□□ -0.62
CALD1-217ENST00000475772 IL18RAPO95256 599 aa11.19□□□□□ -0.62
CALD1-217ENST00000475772 CCDC192P0DO97 292 aa11.19□□□□□ -0.62
CALD1-217ENST00000475772 LMO2P25791 158 aa11.19□□□□□ -0.62
CALD1-217ENST00000475772 ABCD1P33897 745 aa11.19□□□□□ -0.62
CALD1-217ENST00000475772 MPLP40238 635 aa11.19□□□□□ -0.62
CALD1-217ENST00000475772 TFAMQ00059 246 aaKnown RBP11.19□□□□□ -0.62
CALD1-217ENST00000475772 USP4Q13107 963 aa11.19□□□□□ -0.62
CALD1-217ENST00000475772 NFE2Q16621 373 aaPredicted RBP11.19□□□□□ -0.62
CALD1-217ENST00000475772 SOWAHAQ2M3V2 549 aa11.19□□□□□ -0.62
CALD1-217ENST00000475772 L1TD1Q5T7N2 865 aaKnown RBP11.19□□□□□ -0.62
CALD1-217ENST00000475772 IL31Q6EBC2 164 aa11.19□□□□□ -0.62
CALD1-217ENST00000475772 SYT13Q7L8C5 426 aa11.19□□□□□ -0.62
CALD1-217ENST00000475772 LIMS2Q7Z4I7 341 aa11.19□□□□□ -0.62
CALD1-217ENST00000475772 CSGALNACT2Q8N6G5 542 aa11.19□□□□□ -0.62
CALD1-217ENST00000475772 ARL14EPQ8N8R7 260 aaPredicted RBP11.19□□□□□ -0.62
CALD1-217ENST00000475772 RPLP0P6Q8NHW5 317 aa11.19□□□□□ -0.62
CALD1-217ENST00000475772 DDX1Q92499 740 aaKnown RBP11.19□□□□□ -0.62
CALD1-217ENST00000475772 HVCN1Q96D96 273 aa11.19□□□□□ -0.62
CALD1-217ENST00000475772 CLIC6Q96NY7 704 aa11.19□□□□□ -0.62
CALD1-217ENST00000475772 ZNF395Q9H8N7 513 aaPredicted RBP11.19□□□□□ -0.62
CALD1-217ENST00000475772 GDAP2Q9NXN4 497 aa11.19□□□□□ -0.62
CALD1-217ENST00000475772 EBF1Q9UH73 591 aa11.19□□□□□ -0.62
CALD1-217ENST00000475772 FBXO2Q9UK22 296 aaPredicted RBP11.19□□□□□ -0.62
CALD1-217ENST00000475772 NME7Q9Y5B8 376 aa11.19□□□□□ -0.62
CALD1-217ENST00000475772 PCDHGA5Q9Y5G8 931 aa11.19□□□□□ -0.62
CALD1-217ENST00000475772 WNT6Q9Y6F9 365 aa11.19□□□□□ -0.62
CALD1-217ENST00000475772 WDFY3Q8IZQ1 3526 aa11.18□□□□□ -0.62
CALD1-217ENST00000475772 CACNA1EQ15878 2313 aa11.18□□□□□ -0.62
CALD1-217ENST00000475772 CEP295Q9C0D2 2601 aa11.18□□□□□ -0.62
CALD1-217ENST00000475772 CEP192Q8TEP8 1941 aa11.18□□□□□ -0.62
CALD1-217ENST00000475772 K7EQS6 105 aa11.18□□□□□ -0.62
CALD1-217ENST00000475772 KCNK5O95279 499 aa11.18□□□□□ -0.62
CALD1-217ENST00000475772 TCF3P15923 654 aa11.18□□□□□ -0.62
CALD1-217ENST00000475772 OPRD1P41143 372 aa11.18□□□□□ -0.62
CALD1-217ENST00000475772 PNPLA4P41247 253 aa11.18□□□□□ -0.62
CALD1-217ENST00000475772 SHC2P98077 582 aa11.18□□□□□ -0.62
CALD1-217ENST00000475772 TSPY1Q01534 308 aa11.18□□□□□ -0.62
CALD1-217ENST00000475772 DMC1Q14565 340 aa11.18□□□□□ -0.62
CALD1-217ENST00000475772 PDGFRLQ15198 375 aa11.18□□□□□ -0.62
CALD1-217ENST00000475772 CFAP221Q4G0U5 840 aa11.18□□□□□ -0.62
CALD1-217ENST00000475772 FBXO43Q4G163 708 aa11.18□□□□□ -0.62
CALD1-217ENST00000475772 OXLD1Q5BKU9 147 aa11.18□□□□□ -0.62
CALD1-217ENST00000475772 TMEM86AQ8N2M4 240 aa11.18□□□□□ -0.62
CALD1-217ENST00000475772 C12orf50Q8NA57 414 aaPredicted RBP11.18□□□□□ -0.62
CALD1-217ENST00000475772 KBTBD7Q8WVZ9 684 aa11.18□□□□□ -0.62
CALD1-217ENST00000475772 CD101Q93033 1021 aa11.18□□□□□ -0.62
CALD1-217ENST00000475772 CHAMP1Q96JM3 812 aa11.18□□□□□ -0.62
CALD1-217ENST00000475772 ZNF560Q96MR9 790 aa11.18□□□□□ -0.62
CALD1-217ENST00000475772 ACCSQ96QU6 501 aa11.18□□□□□ -0.62
CALD1-217ENST00000475772 CBWD1Q9BRT8 395 aa11.18□□□□□ -0.62
CALD1-217ENST00000475772 PCIF1Q9H4Z3 704 aa11.18□□□□□ -0.62
CALD1-217ENST00000475772 MRPL44Q9H9J2 332 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms