RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 UBE4BO95155 1302 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 FANCMQ8IYD8 2048 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 ANK1P16157 1881 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 LAMA1P25391 3075 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 TICRRQ7Z2Z1 1910 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 A0A0A0MRY4 1105 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 CCDC163A0A0D9SF12 145 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 FAM237AA0A1B0GTK4 181 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.47□□□□□ -1.21
HDAC3-207ENST00000475549 A8MXQ7 604 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 TM4SF5O14894 197 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 TRIM66O15016 1216 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 AXIN1O15169 862 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 COCHO43405 550 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 ATG13O75143 517 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 RPP40O75818 363 aaKnown RBP7.47□□□□□ -1.21
HDAC3-207ENST00000475549 CYP17A1P05093 508 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 ZDHHC11BP0C7U3 371 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 PDIA4P13667 645 aaKnown RBP7.47□□□□□ -1.21
HDAC3-207ENST00000475549 HNRNPLP14866 589 aaKnown RBP eCLIP7.47□□□□□ -1.21
HDAC3-207ENST00000475549 PFKFB1P16118 471 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 CMA1P23946 247 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 ATICP31939 592 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 MCCD1P59942 119 aaPredicted RBP7.47□□□□□ -1.21
HDAC3-207ENST00000475549 TNNC1P63316 161 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 TRPC3Q13507 836 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 NCOA4Q13772 614 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 KCNB1Q14721 858 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 SF3A2Q15428 464 aaKnown RBP7.47□□□□□ -1.21
HDAC3-207ENST00000475549 ZACNQ401N2 412 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 PLA2G2CQ5R387 149 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 EMC10Q5UCC4 262 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 SPOPLQ6IQ16 392 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 PRR23CQ6ZRP0 262 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 SV2AQ7L0J3 742 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 SYT13Q7L8C5 426 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 SLC9A9Q8IVB4 645 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 FUKQ8N0W3 1084 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 CPA6Q8N4T0 437 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 CAMKK1Q8N5S9 505 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 C12orf29Q8N999 325 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 B3GALNT2Q8NCR0 500 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 CD101Q93033 1021 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 ATP2A3Q93084 1043 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 ZC3H10Q96K80 434 aaKnown RBP7.47□□□□□ -1.21
HDAC3-207ENST00000475549 HHIPQ96QV1 700 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 ARRDC1-AS1Q9H2J1 176 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 SMOC1Q9H4F8 434 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 CGNQ9P2M7 1197 aaKnown RBP7.47□□□□□ -1.21
HDAC3-207ENST00000475549 HCN2Q9UL51 889 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 RAB23Q9ULC3 237 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 R3HCC1Q9Y3T6 440 aaKnown RBP7.47□□□□□ -1.21
HDAC3-207ENST00000475549 CPQQ9Y646 472 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 MYH11P35749 1972 aa7.47□□□□□ -1.21
HDAC3-207ENST00000475549 FAM92AA1XBS5 289 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 PDXKO00764 312 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 SLC30A4O14863 429 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 GREM1O60565 184 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 LRP3O75074 770 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 PHACTR2O75167 634 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 TBX18O95935 607 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 ABL1P00519 1130 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 NR3C1P04150 777 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 ZNF806P0C7X5 589 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 CCDC130P13994 396 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 PFKLP17858 780 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 ANXA13P27216 316 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 YWHAQP27348 245 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 ASPAP45381 313 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 PPP3CCP48454 512 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 IFNAR2P48551 515 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 NDUFA8P51970 172 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 AMPD2Q01433 879 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 PPP3CAQ08209 521 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 IFRD2Q12894 506 aaPredicted RBP7.46□□□□□ -1.22
HDAC3-207ENST00000475549 PSMD2Q13200 908 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 BIRC3Q13489 604 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 DMC1Q14565 340 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 DHCR24Q15392 516 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 PLK5Q496M5 336 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 FBXO43Q4G163 708 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 C2orf27AQ580R0 203 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 SNX30Q5VWJ9 437 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 TMEM92Q6UXU6 159 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 CEP68Q76N32 757 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.46□□□□□ -1.22
HDAC3-207ENST00000475549 ACOT1Q86TX2 421 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 HSCBQ8IWL3 235 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 CEP57L1Q8IYX8 460 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 NUP93Q8N1F7 819 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 CRYBG2Q8N1P7 616 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 PHTF2Q8N3S3 785 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 KIAA1958Q8N8K9 716 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 GOLGA5Q8TBA6 731 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 USP33Q8TEY7 942 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 WHAMMQ8TF30 809 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 SYAP1Q96A49 352 aaPredicted RBP7.46□□□□□ -1.22
HDAC3-207ENST00000475549 P2RY11Q96G91 374 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 TWNKQ96RR1 684 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 SMOQ99835 787 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms