RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 HOOK1Q9UJC3 728 aaKnown RBP10.03□□□□□ -0.8
PDPN-204ENST00000475043 ATP8B3O60423 1300 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 MYH10P35580 1976 aa10.03□□□□□ -0.8
PDPN-204ENST00000475043 SMC2O95347 1197 aa10.02□□□□□ -0.81
PDPN-204ENST00000475043 ASS1P00966 412 aaKnown RBP10.02□□□□□ -0.81
PDPN-204ENST00000475043 HDCP19113 662 aa10.02□□□□□ -0.81
PDPN-204ENST00000475043 TRIM21P19474 475 aaKnown RBP10.02□□□□□ -0.81
PDPN-204ENST00000475043 CTHP32929 405 aa10.02□□□□□ -0.81
PDPN-204ENST00000475043 PRCPP42785 496 aa10.02□□□□□ -0.81
PDPN-204ENST00000475043 CACNA2D1P54289 1103 aa10.02□□□□□ -0.81
PDPN-204ENST00000475043 MLLT6P55198 1093 aaPredicted RBP10.02□□□□□ -0.81
PDPN-204ENST00000475043 PPP3CAQ08209 521 aa10.02□□□□□ -0.81
PDPN-204ENST00000475043 MTAPQ13126 283 aa10.02□□□□□ -0.81
PDPN-204ENST00000475043 ORC1Q13415 861 aa10.02□□□□□ -0.81
PDPN-204ENST00000475043 RUNX3Q13761 415 aa10.02□□□□□ -0.81
PDPN-204ENST00000475043 LRRC32Q14392 662 aa10.02□□□□□ -0.81
PDPN-204ENST00000475043 PON2Q15165 354 aa10.02□□□□□ -0.81
PDPN-204ENST00000475043 EDRF1Q3B7T1 1238 aa10.02□□□□□ -0.81
PDPN-204ENST00000475043 ITPRIPL2Q3MIP1 535 aa10.02□□□□□ -0.81
PDPN-204ENST00000475043 C1orf220Q5T0J3 134 aa10.02□□□□□ -0.81
PDPN-204ENST00000475043 ZNF658Q5TYW1 1059 aaPredicted RBP10.02□□□□□ -0.81
PDPN-204ENST00000475043 TRIM68Q6AZZ1 485 aa10.02□□□□□ -0.81
PDPN-204ENST00000475043 C1orf228Q6PIY5 440 aa10.02□□□□□ -0.81
PDPN-204ENST00000475043 TSSK4Q6SA08 328 aa10.02□□□□□ -0.81
PDPN-204ENST00000475043 ACOT1Q86TX2 421 aa10.02□□□□□ -0.81
PDPN-204ENST00000475043 MAML2Q8IZL2 1156 aaPredicted RBP10.02□□□□□ -0.81
PDPN-204ENST00000475043 CCDC150Q8NCX0 1101 aa10.02□□□□□ -0.81
PDPN-204ENST00000475043 ENGASEQ8NFI3 743 aa10.02□□□□□ -0.81
PDPN-204ENST00000475043 KCNV2Q8TDN2 545 aa10.02□□□□□ -0.81
PDPN-204ENST00000475043 C8orf48Q96LL4 319 aa10.02□□□□□ -0.81
PDPN-204ENST00000475043 CEP295NLQ96MC4 621 aa10.02□□□□□ -0.81
PDPN-204ENST00000475043 SLITRK1Q96PX8 696 aa10.02□□□□□ -0.81
PDPN-204ENST00000475043 GSDMAQ96QA5 445 aa10.02□□□□□ -0.81
PDPN-204ENST00000475043 SLC22A12Q96S37 553 aa10.02□□□□□ -0.81
PDPN-204ENST00000475043 NPDC1Q9NQX5 325 aaPredicted RBP10.02□□□□□ -0.81
PDPN-204ENST00000475043 FBXO4Q9UKT5 387 aa10.02□□□□□ -0.81
PDPN-204ENST00000475043 PCDHA5Q9Y5H7 936 aa10.02□□□□□ -0.81
PDPN-204ENST00000475043 CETN3O15182 167 aa10.01□□□□□ -0.81
PDPN-204ENST00000475043 KINO60870 393 aaKnown RBP10.01□□□□□ -0.81
PDPN-204ENST00000475043 EPB41P11171 864 aaKnown RBP10.01□□□□□ -0.81
PDPN-204ENST00000475043 CHRNB1P11230 501 aa10.01□□□□□ -0.81
PDPN-204ENST00000475043 PDE6CP51160 858 aa10.01□□□□□ -0.81
PDPN-204ENST00000475043 NDST1P52848 882 aa10.01□□□□□ -0.81
PDPN-204ENST00000475043 NOP14P78316 857 aaKnown RBP10.01□□□□□ -0.81
PDPN-204ENST00000475043 KCNC4Q03721 635 aa10.01□□□□□ -0.81
PDPN-204ENST00000475043 TAF10Q12962 218 aa10.01□□□□□ -0.81
PDPN-204ENST00000475043 ZNF268Q14587 947 aaPredicted RBP10.01□□□□□ -0.81
PDPN-204ENST00000475043 PPP2R5DQ14738 602 aa10.01□□□□□ -0.81
PDPN-204ENST00000475043 MTF1Q14872 753 aa10.01□□□□□ -0.81
PDPN-204ENST00000475043 ZCWPW2Q504Y3 356 aa10.01□□□□□ -0.81
PDPN-204ENST00000475043 TCERG1LQ5VWI1 586 aa10.01□□□□□ -0.81
PDPN-204ENST00000475043 ISM2Q6H9L7 571 aa10.01□□□□□ -0.81
PDPN-204ENST00000475043 TXNDC11Q6PKC3 985 aa10.01□□□□□ -0.81
PDPN-204ENST00000475043 FAM35AQ86V20 835 aa10.01□□□□□ -0.81
PDPN-204ENST00000475043 NUP93Q8N1F7 819 aa10.01□□□□□ -0.81
PDPN-204ENST00000475043 TAS1R2Q8TE23 839 aa10.01□□□□□ -0.81
PDPN-204ENST00000475043 ATRIPQ8WXE1 791 aa10.01□□□□□ -0.81
PDPN-204ENST00000475043 SMARCD1Q96GM5 515 aa10.01□□□□□ -0.81
PDPN-204ENST00000475043 TIGD1Q96MW7 591 aa10.01□□□□□ -0.81
PDPN-204ENST00000475043 KCNK16Q96T55 309 aa10.01□□□□□ -0.81
PDPN-204ENST00000475043 TSG101Q99816 390 aa10.01□□□□□ -0.81
PDPN-204ENST00000475043 FAM83CQ9BQN1 747 aa10.01□□□□□ -0.81
PDPN-204ENST00000475043 CHRDQ9H2X0 955 aa10.01□□□□□ -0.81
PDPN-204ENST00000475043 SEMA4AQ9H3S1 761 aa10.01□□□□□ -0.81
PDPN-204ENST00000475043 TMEM8AQ9HCN3 771 aa10.01□□□□□ -0.81
PDPN-204ENST00000475043 RBM12Q9NTZ6 932 aaKnown RBP10.01□□□□□ -0.81
PDPN-204ENST00000475043 FAM49BQ9NUQ9 324 aa10.01□□□□□ -0.81
PDPN-204ENST00000475043 TMEM30AQ9NV96 361 aa10.01□□□□□ -0.81
PDPN-204ENST00000475043 DUS2Q9NX74 493 aaKnown RBP10.01□□□□□ -0.81
PDPN-204ENST00000475043 HMGXB4Q9UGU5 601 aa10.01□□□□□ -0.81
PDPN-204ENST00000475043 FANCMQ8IYD8 2048 aa10□□□□□ -0.81
PDPN-204ENST00000475043 MYO16Q9Y6X6 1858 aa10□□□□□ -0.81
PDPN-204ENST00000475043 USP34Q70CQ2 3546 aa10□□□□□ -0.81
PDPN-204ENST00000475043 ZNF840PA6NDX5 716 aa10□□□□□ -0.81
PDPN-204ENST00000475043 AP1G2O75843 785 aa10□□□□□ -0.81
PDPN-204ENST00000475043 RTN3O95197 1032 aaPredicted RBP10□□□□□ -0.81
PDPN-204ENST00000475043 LMNAP02545 664 aaKnown RBP10□□□□□ -0.81
PDPN-204ENST00000475043 CCDC130P13994 396 aa10□□□□□ -0.81
PDPN-204ENST00000475043 ARSAP15289 507 aa10□□□□□ -0.81
PDPN-204ENST00000475043 CD58P19256 250 aa10□□□□□ -0.81
PDPN-204ENST00000475043 YWHAQP27348 245 aa10□□□□□ -0.81
PDPN-204ENST00000475043 ASPAP45381 313 aa10□□□□□ -0.81
PDPN-204ENST00000475043 PPP3CCP48454 512 aa10□□□□□ -0.81
PDPN-204ENST00000475043 IFNAR2P48551 515 aa10□□□□□ -0.81
PDPN-204ENST00000475043 CCR3P51677 355 aa10□□□□□ -0.81
PDPN-204ENST00000475043 STIM1Q13586 685 aa10□□□□□ -0.81
PDPN-204ENST00000475043 PDGFRLQ15198 375 aa10□□□□□ -0.81
PDPN-204ENST00000475043 ZNF77Q15935 545 aa10□□□□□ -0.81
PDPN-204ENST00000475043 ZNF528Q3MIS6 628 aa10□□□□□ -0.81
PDPN-204ENST00000475043 DCAF17Q5H9S7 520 aaPredicted RBP10□□□□□ -0.81
PDPN-204ENST00000475043 KRT39Q6A163 491 aa10□□□□□ -0.81
PDPN-204ENST00000475043 PAQR9Q6ZVX9 377 aa10□□□□□ -0.81
PDPN-204ENST00000475043 UNC93AQ86WB7 457 aa10□□□□□ -0.81
PDPN-204ENST00000475043 FUKQ8N0W3 1084 aa10□□□□□ -0.81
PDPN-204ENST00000475043 ADSSL1Q8N142 457 aa10□□□□□ -0.81
PDPN-204ENST00000475043 C12orf29Q8N999 325 aa10□□□□□ -0.81
PDPN-204ENST00000475043 TTC13Q8NBP0 860 aa10□□□□□ -0.81
PDPN-204ENST00000475043 RIN3Q8TB24 985 aa10□□□□□ -0.81
PDPN-204ENST00000475043 SLC2A14Q8TDB8 520 aa10□□□□□ -0.81
PDPN-204ENST00000475043 SH3RF2Q8TEC5 729 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms