RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 CXCL12P48061 93 aa12.61□□□□□ -0.39
CLIP2-204ENST00000474962 MXI1P50539 228 aa12.61□□□□□ -0.39
CLIP2-204ENST00000474962 MARSP56192 900 aaKnown RBP12.61□□□□□ -0.39
CLIP2-204ENST00000474962 CLDN10P78369 228 aa12.61□□□□□ -0.39
CLIP2-204ENST00000474962 KCNJ12Q14500 433 aa12.61□□□□□ -0.39
CLIP2-204ENST00000474962 ITPRIPL2Q3MIP1 535 aa12.61□□□□□ -0.39
CLIP2-204ENST00000474962 CFAP221Q4G0U5 840 aa12.61□□□□□ -0.39
CLIP2-204ENST00000474962 LRSAM1Q6UWE0 723 aa12.61□□□□□ -0.39
CLIP2-204ENST00000474962 Q6ZS52 159 aa12.61□□□□□ -0.39
CLIP2-204ENST00000474962 SV2AQ7L0J3 742 aa12.61□□□□□ -0.39
CLIP2-204ENST00000474962 PLEKHO2Q8TD55 490 aa12.61□□□□□ -0.39
CLIP2-204ENST00000474962 MRPS31Q92665 395 aaKnown RBP12.61□□□□□ -0.39
CLIP2-204ENST00000474962 MYRFLQ96LU7 910 aa12.61□□□□□ -0.39
CLIP2-204ENST00000474962 MED15Q96RN5 788 aa12.61□□□□□ -0.39
CLIP2-204ENST00000474962 SYT15Q9BQS2 421 aa12.61□□□□□ -0.39
CLIP2-204ENST00000474962 EBF3Q9H4W6 596 aa12.61□□□□□ -0.39
CLIP2-204ENST00000474962 TRPC7Q9HCX4 862 aa12.61□□□□□ -0.39
CLIP2-204ENST00000474962 SAMSN1Q9NSI8 373 aaKnown RBP12.61□□□□□ -0.39
CLIP2-204ENST00000474962 FANCLQ9NW38 375 aa12.61□□□□□ -0.39
CLIP2-204ENST00000474962 CDH9Q9ULB4 789 aa12.61□□□□□ -0.39
CLIP2-204ENST00000474962 NME7Q9Y5B8 376 aa12.61□□□□□ -0.39
CLIP2-204ENST00000474962 FANCMQ8IYD8 2048 aa12.61□□□□□ -0.39
CLIP2-204ENST00000474962 LAMA1P25391 3075 aa12.6□□□□□ -0.39
CLIP2-204ENST00000474962 AFPP02771 609 aaKnown RBP12.6□□□□□ -0.39
CLIP2-204ENST00000474962 C4BPAP04003 597 aaKnown RBP12.6□□□□□ -0.39
CLIP2-204ENST00000474962 P4HA1P13674 534 aa12.6□□□□□ -0.39
CLIP2-204ENST00000474962 WARSP23381 471 aaKnown RBP12.6□□□□□ -0.39
CLIP2-204ENST00000474962 DDX6P26196 483 aaKnown RBP eCLIP12.6□□□□□ -0.39
CLIP2-204ENST00000474962 GRIK1P39086 918 aa12.6□□□□□ -0.39
CLIP2-204ENST00000474962 ID4P47928 161 aa12.6□□□□□ -0.39
CLIP2-204ENST00000474962 MYL6P60660 151 aa12.6□□□□□ -0.39
CLIP2-204ENST00000474962 USP46P62068 366 aa12.6□□□□□ -0.39
CLIP2-204ENST00000474962 PLCB2Q00722 1185 aa12.6□□□□□ -0.39
CLIP2-204ENST00000474962 CYP27A1Q02318 531 aa12.6□□□□□ -0.39
CLIP2-204ENST00000474962 PPP3CAQ08209 521 aa12.6□□□□□ -0.39
CLIP2-204ENST00000474962 DMWDQ09019 674 aa12.6□□□□□ -0.39
CLIP2-204ENST00000474962 KCNH2Q12809 1159 aa12.6□□□□□ -0.39
CLIP2-204ENST00000474962 RUNX3Q13761 415 aa12.6□□□□□ -0.39
CLIP2-204ENST00000474962 NCOA4Q13772 614 aa12.6□□□□□ -0.39
CLIP2-204ENST00000474962 SGSM1Q2NKQ1 1148 aa12.6□□□□□ -0.39
CLIP2-204ENST00000474962 WDR72Q3MJ13 1102 aa12.6□□□□□ -0.39
CLIP2-204ENST00000474962 TDRD10Q5VZ19 366 aaKnown RBP12.6□□□□□ -0.39
CLIP2-204ENST00000474962 TRIM59Q8IWR1 403 aa12.6□□□□□ -0.39
CLIP2-204ENST00000474962 SPEM1Q8N4L4 309 aa12.6□□□□□ -0.39
CLIP2-204ENST00000474962 FBXL13Q8NEE6 735 aa12.6□□□□□ -0.39
CLIP2-204ENST00000474962 TTC16Q8NEE8 873 aa12.6□□□□□ -0.39
CLIP2-204ENST00000474962 SPATA18Q8TC71 538 aa12.6□□□□□ -0.39
CLIP2-204ENST00000474962 ELMO3Q96BJ8 720 aa12.6□□□□□ -0.39
CLIP2-204ENST00000474962 FUCA2Q9BTY2 467 aa12.6□□□□□ -0.39
CLIP2-204ENST00000474962 SNX25Q9H3E2 840 aa12.6□□□□□ -0.39
CLIP2-204ENST00000474962 FBRSL1Q9HCM7 1045 aaKnown RBP12.6□□□□□ -0.39
CLIP2-204ENST00000474962 HPS4Q9NQG7 708 aa12.6□□□□□ -0.39
CLIP2-204ENST00000474962 COL4A2P08572 1712 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 CEP250Q9BV73 2442 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 C2orf78A6NCI8 922 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 HLA-DRAP01903 254 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 ARSAP15289 507 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 PTPN1P18031 435 aaKnown RBP12.59□□□□□ -0.39
CLIP2-204ENST00000474962 MAGEA11P43364 429 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 FMO5P49326 533 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 CCR3P51677 355 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 NRLP54845 237 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 CDH8P55286 799 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 TNNC1P63316 161 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 CCINQ13939 588 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 LPAL2Q16609 132 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 MAN2A1Q16706 1144 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 ZNF699Q32M78 642 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 ZACNQ401N2 412 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 TCP11X2Q5H9J9 407 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 ZNF667Q5HYK9 610 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 DGKKQ5KSL6 1271 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 C1orf228Q6PIY5 440 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 C4orf50Q6ZRC1 276 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 ARL14EPQ8N8R7 260 aaPredicted RBP12.59□□□□□ -0.39
CLIP2-204ENST00000474962 OR6B3Q8NGW1 331 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 MYCBPAPQ8TBZ2 947 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 TAF4BQ92750 862 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 SLC35C1Q96A29 364 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 MYLPFQ96A32 169 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 RMDN1Q96DB5 314 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 CHFRQ96EP1 664 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 TRMT2BQ96GJ1 504 aaKnown RBP12.59□□□□□ -0.39
CLIP2-204ENST00000474962 MSANTD3Q96H12 275 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 PCED1BQ96HM7 432 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 FUBP3Q96I24 572 aaKnown RBP eCLIP12.59□□□□□ -0.39
CLIP2-204ENST00000474962 TUBGCP2Q9BSJ2 902 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 FAM126AQ9BYI3 521 aaPredicted RBP12.59□□□□□ -0.39
CLIP2-204ENST00000474962 LINC00597Q9H2U6 94 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 DPEP3Q9H4B8 488 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 UXTQ9UBK9 157 aaPredicted RBP12.59□□□□□ -0.39
CLIP2-204ENST00000474962 NXF1Q9UBU9 619 aaKnown RBP12.59□□□□□ -0.39
CLIP2-204ENST00000474962 ZMYM5Q9UJ78 669 aa12.59□□□□□ -0.39
CLIP2-204ENST00000474962 PATJQ8NI35 1801 aa12.58□□□□□ -0.4
CLIP2-204ENST00000474962 SOBPA7XYQ1 873 aa12.58□□□□□ -0.4
CLIP2-204ENST00000474962 CHURC1-FNTBB4DL54 471 aa12.58□□□□□ -0.4
CLIP2-204ENST00000474962 P4HA2O15460 535 aa12.58□□□□□ -0.4
CLIP2-204ENST00000474962 HRO43593 1189 aa12.58□□□□□ -0.4
CLIP2-204ENST00000474962 HDCP19113 662 aa12.58□□□□□ -0.4
CLIP2-204ENST00000474962 FNTBP49356 437 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms