RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 ACAT1P24752 427 aaKnown RBP6.38□□□□□ -1.39
HERC4-209ENST00000473533 SSTR1P30872 391 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 OAZ1P54368 228 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 POLE2P56282 527 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 MRPS9P82933 396 aaKnown RBP6.38□□□□□ -1.39
HERC4-209ENST00000473533 MED21Q13503 144 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 DPYSL3Q14195 570 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 PDK2Q15119 407 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 DUOXA2Q1HG44 320 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 LRRC23Q53EV4 343 aaPredicted RBP6.38□□□□□ -1.39
HERC4-209ENST00000473533 PPP1R15BQ5SWA1 713 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 DARS2Q6PI48 645 aaKnown RBP6.38□□□□□ -1.39
HERC4-209ENST00000473533 DSTYKQ6XUX3 929 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 MYLK4Q86YV6 388 aaPredicted RBP6.38□□□□□ -1.39
HERC4-209ENST00000473533 BRSK2Q8IWQ3 736 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 NSUN6Q8TEA1 469 aaKnown RBP6.38□□□□□ -1.39
HERC4-209ENST00000473533 CDKL2Q92772 493 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 RILPQ96NA2 401 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 SRPK1Q96SB4 655 aaKnown RBP6.38□□□□□ -1.39
HERC4-209ENST00000473533 ECSITQ9BQ95 431 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 DNAI2Q9GZS0 605 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 SLC38A10Q9HBR0 1119 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 MRGBPQ9NV56 204 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 THAP1Q9NVV9 213 aa6.38□□□□□ -1.39
HERC4-209ENST00000473533 SPDYE2BA6NHP3 402 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 FOXO6A8MYZ6 492 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 ZNF487B1APH4 448 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 H3BRJ5 948 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 TBX10O75333 385 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 SPDYE6P0CI01 402 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 RBP3P10745 1247 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 CCDC130P13994 396 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 ZFXP17010 805 aaPredicted RBP6.37□□□□□ -1.39
HERC4-209ENST00000473533 BGNP21810 368 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 GRK2P25098 689 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 PRDX6P30041 224 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 CDK7P50613 346 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 OVGP1Q12889 678 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 STX3Q13277 289 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 EMC2Q15006 297 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 ADRM1Q16186 407 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 UGCGQ16739 394 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 WDR72Q3MJ13 1102 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 SLC30A10Q6XR72 485 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 CYS1Q717R9 158 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 CDKL3Q8IVW4 592 aaPredicted RBP6.37□□□□□ -1.39
HERC4-209ENST00000473533 UBR7Q8N806 425 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 MCUQ8NE86 351 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 ZSWIM2Q8NEG5 633 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 ZNF516Q92618 1163 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 FAF2Q96CS3 445 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 CMTM5Q96DZ9 223 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 MAML3Q96JK9 1138 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 AGBL1Q96MI9 1066 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 FAM210AQ96ND0 272 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 BTBD9Q96Q07 612 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 SERPINI1Q99574 410 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 FAM118BQ9BPY3 351 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 GORASP1Q9BQQ3 440 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 XAB2Q9HCS7 855 aaKnown RBP6.37□□□□□ -1.39
HERC4-209ENST00000473533 JPH1Q9HDC5 661 aaPredicted RBP6.37□□□□□ -1.39
HERC4-209ENST00000473533 PDLIM7Q9NR12 457 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 NRBP2Q9NSY0 501 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 CNTN3Q9P232 1028 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 MID2Q9UJV3 735 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 ITGA11Q9UKX5 1188 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.37□□□□□ -1.39
HERC4-209ENST00000473533 PLLPQ9Y342 182 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 GOLGA8QA0A0J9YX86 632 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 TCRBV5S1A1TA0A578 114 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 GOLGA8OA6NCC3 632 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 GOLGA8NF8WBI6 632 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 PEX1O43933 1283 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 VNN1O95497 513 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 LYNP07948 512 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 PYGBP11216 843 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 AOC1P19801 751 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 CRHR1P34998 444 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 HSPA13P48723 471 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 RPS6KA3P51812 740 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 PRKCEQ02156 737 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 HNRNPDQ14103 355 aaKnown RBP6.37□□□□□ -1.39
HERC4-209ENST00000473533 STILQ15468 1287 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 SHROOM1Q2M3G4 852 aaPredicted RBP6.37□□□□□ -1.39
HERC4-209ENST00000473533 EFHC1Q5JVL4 640 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 THEMIS2Q5TEJ8 643 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 GPAT2Q6NUI2 795 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 SAMD1Q6SPF0 538 aaPredicted RBP6.37□□□□□ -1.39
HERC4-209ENST00000473533 TIFABQ6ZNK6 161 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 RINLQ6ZS11 566 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 PRUNE1Q86TP1 453 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 TMEM126BQ8IUX1 230 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 CTAGE3PQ8IX95 158 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 ZNF276Q8N554 614 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 SLC4A11Q8NBS3 891 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 MIPOL1Q8TD10 442 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 IFT43Q96FT9 208 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 ANKRD36BP1Q96IX9 119 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 KCNK16Q96T55 309 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 C2orf40Q9H1Z8 148 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms