RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 BLACEA4D250 179 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 SMCO2A6NFE2 343 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 GOLGA8AA7E2F4 631 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 GOLGA8BA8MQT2 603 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 FFAR3O14843 346 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 LINC01565O15544 149 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 GAS7O60861 476 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 PLEKHA8P1O95397 391 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 GLP2RO95838 553 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 CPP00450 1065 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 PMLP29590 882 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 AVPR2P30518 371 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 CA8P35219 290 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 THBS2P35442 1172 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 BCL6P41182 706 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 NBL1P41271 181 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 METAP2P50579 478 aaKnown RBP eCLIP3.91□□□□□ -1.78
XRN1-209ENST00000472625 CLCN5P51795 746 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 ANTXR2P58335 489 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 KRTAP10-2P60368 255 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 FAM189BP81408 668 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 RNASELQ05823 741 aaKnown RBP3.91□□□□□ -1.78
XRN1-209ENST00000472625 NCBP1Q09161 790 aaKnown RBP3.91□□□□□ -1.78
XRN1-209ENST00000472625 DNAH14Q0VDD8 3507 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 ITGB3BPQ13352 177 aaPredicted RBP3.91□□□□□ -1.78
XRN1-209ENST00000472625 UBE2SQ16763 222 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 KIZQ2M2Z5 673 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 SKOR2Q2VWA4 1001 aaPredicted RBP3.91□□□□□ -1.78
XRN1-209ENST00000472625 TWF2Q6IBS0 349 aaKnown RBP3.91□□□□□ -1.78
XRN1-209ENST00000472625 CPLX2Q6PUV4 134 aaKnown RBP3.91□□□□□ -1.78
XRN1-209ENST00000472625 APOA5Q6Q788 366 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 ABHD15Q6UXT9 468 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 ADGRD2Q7Z7M1 963 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 CABP7Q86V35 215 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 FAM228AQ86W67 206 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 PLA2G4DQ86XP0 818 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 MIB1Q86YT6 1006 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 CCDC60Q8IWA6 550 aaPredicted RBP3.91□□□□□ -1.78
XRN1-209ENST00000472625 PPIL6Q8IXY8 311 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 KIAA0319LQ8IZA0 1049 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 MRPL43Q8N983 215 aaKnown RBP3.91□□□□□ -1.78
XRN1-209ENST00000472625 CNNM3Q8NE01 707 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 PRSS33Q8NF86 280 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 DIO2Q92813 273 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 KISS1RQ969F8 398 aaPredicted RBP3.91□□□□□ -1.78
XRN1-209ENST00000472625 PPP1R14AQ96A00 147 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 CCDC51Q96ER9 411 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 EXOC2Q96KP1 924 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 CCDC140Q96MF4 163 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 RIT2Q99578 217 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 NAP1L4Q99733 375 aaKnown RBP3.91□□□□□ -1.78
XRN1-209ENST00000472625 MYL10Q9BUA6 226 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 RHOBTB2Q9BYZ6 727 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 ZMYND12Q9H0C1 365 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 TMX1Q9H3N1 280 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 TYW1Q9NV66 732 aaKnown RBP3.91□□□□□ -1.78
XRN1-209ENST00000472625 SNTG2Q9NY99 539 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 MARCH2Q9P0N8 246 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 IGSF9Q9P2J2 1179 aa3.91□□□□□ -1.78
XRN1-209ENST00000472625 NOC2LQ9Y3T9 749 aaKnown RBP3.91□□□□□ -1.78
XRN1-209ENST00000472625 ZFP37Q9Y6Q3 630 aaPredicted RBP3.91□□□□□ -1.78
XRN1-209ENST00000472625 NID2Q14112 1375 aa3.9□□□□□ -1.78
XRN1-209ENST00000472625 ZMYM2Q9UBW7 1377 aa3.9□□□□□ -1.78
XRN1-209ENST00000472625 MYH6P13533 1939 aa3.9□□□□□ -1.78
XRN1-209ENST00000472625 KLF18A0A0U1RQI7 1052 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 DDX39AO00148 427 aaKnown RBP3.9□□□□□ -1.79
XRN1-209ENST00000472625 SLC27A2O14975 620 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 PER2O15055 1255 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 MEFVO15553 781 aaPredicted RBP3.9□□□□□ -1.79
XRN1-209ENST00000472625 NPHS1O60500 1241 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 ZC3H11AO75152 810 aaKnown RBP eCLIP3.9□□□□□ -1.79
XRN1-209ENST00000472625 CDKL5O76039 1030 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 STK10O94804 968 aaKnown RBP3.9□□□□□ -1.79
XRN1-209ENST00000472625 URODP06132 367 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 FAM153BP0C7A2 387 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 CTSAP10619 480 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 PABPC1P11940 636 aaKnown RBP3.9□□□□□ -1.79
XRN1-209ENST00000472625 DARSP14868 501 aaKnown RBP3.9□□□□□ -1.79
XRN1-209ENST00000472625 XBP1P17861 261 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 AOC1P19801 751 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 ATP2B1P20020 1258 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 IBSPP21815 317 aaPredicted RBP3.9□□□□□ -1.79
XRN1-209ENST00000472625 DNAJB1P25685 340 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 PSMA5P28066 241 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 CIITAP33076 1130 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 GTF2F1P35269 517 aaKnown RBP eCLIP3.9□□□□□ -1.79
XRN1-209ENST00000472625 MAGEA9P43362 315 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 GPC3P51654 580 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 NLRP11P59045 1033 aaKnown RBP3.9□□□□□ -1.79
XRN1-209ENST00000472625 PRKCEQ02156 737 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 PTH1RQ03431 593 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 TCF15Q12870 199 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 TDGQ13569 410 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 KCNC3Q14003 757 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 PFKFB3Q16875 520 aaPredicted RBP3.9□□□□□ -1.79
XRN1-209ENST00000472625 TMEM266Q2M3C6 531 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 SLC35G1Q2M3R5 365 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 PRR16Q569H4 304 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 XKR3Q5GH77 459 aa3.9□□□□□ -1.79
XRN1-209ENST00000472625 BMP2KLQ5H9B9 411 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms