RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 PIK3CAP42336 1068 aa12.24□□□□□ -0.45
COL4A3-205ENST00000471862 CXCL12P48061 93 aa12.24□□□□□ -0.45
COL4A3-205ENST00000471862 GCLMP48507 274 aa12.24□□□□□ -0.45
COL4A3-205ENST00000471862 PDE6CP51160 858 aa12.24□□□□□ -0.45
COL4A3-205ENST00000471862 NDST1P52848 882 aa12.24□□□□□ -0.45
COL4A3-205ENST00000471862 SLC7A9P82251 487 aa12.24□□□□□ -0.45
COL4A3-205ENST00000471862 INCA1Q0VD86 236 aa12.24□□□□□ -0.45
COL4A3-205ENST00000471862 TAF10Q12962 218 aa12.24□□□□□ -0.45
COL4A3-205ENST00000471862 ADAM9Q13443 819 aa12.24□□□□□ -0.45
COL4A3-205ENST00000471862 EML3Q32P44 896 aa12.24□□□□□ -0.45
COL4A3-205ENST00000471862 FSTL4Q6MZW2 842 aa12.24□□□□□ -0.45
COL4A3-205ENST00000471862 CC2D1AQ6P1N0 951 aaPredicted RBP12.24□□□□□ -0.45
COL4A3-205ENST00000471862 ACOT1Q86TX2 421 aa12.24□□□□□ -0.45
COL4A3-205ENST00000471862 ZC3H3Q8IXZ2 948 aaKnown RBP12.24□□□□□ -0.45
COL4A3-205ENST00000471862 NUP93Q8N1F7 819 aa12.24□□□□□ -0.45
COL4A3-205ENST00000471862 KIAA1958Q8N8K9 716 aa12.24□□□□□ -0.45
COL4A3-205ENST00000471862 TAS1R2Q8TE23 839 aa12.24□□□□□ -0.45
COL4A3-205ENST00000471862 ATRIPQ8WXE1 791 aa12.24□□□□□ -0.45
COL4A3-205ENST00000471862 OVCA2Q8WZ82 227 aa12.24□□□□□ -0.45
COL4A3-205ENST00000471862 CCDC34Q96HJ3 373 aa12.24□□□□□ -0.45
COL4A3-205ENST00000471862 KCNK16Q96T55 309 aa12.24□□□□□ -0.45
COL4A3-205ENST00000471862 RNF38Q9H0F5 515 aa12.24□□□□□ -0.45
COL4A3-205ENST00000471862 ECT2Q9H8V3 914 aa12.24□□□□□ -0.45
COL4A3-205ENST00000471862 FBRSL1Q9HCM7 1045 aaKnown RBP12.24□□□□□ -0.45
COL4A3-205ENST00000471862 TMEM8AQ9HCN3 771 aa12.24□□□□□ -0.45
COL4A3-205ENST00000471862 CSNK1G1Q9HCP0 422 aa12.24□□□□□ -0.45
COL4A3-205ENST00000471862 C2orf42Q9NWW7 574 aa12.24□□□□□ -0.45
COL4A3-205ENST00000471862 DUS2Q9NX74 493 aaKnown RBP12.24□□□□□ -0.45
COL4A3-205ENST00000471862 WNT6Q9Y6F9 365 aa12.24□□□□□ -0.45
COL4A3-205ENST00000471862 DCHS1Q96JQ0 3298 aa12.24□□□□□ -0.45
COL4A3-205ENST00000471862 WDR87Q6ZQQ6 2873 aa12.24□□□□□ -0.45
COL4A3-205ENST00000471862 MYOFQ9NZM1 2061 aa12.23□□□□□ -0.45
COL4A3-205ENST00000471862 LEFTY2O00292 366 aa12.23□□□□□ -0.45
COL4A3-205ENST00000471862 RTN3O95197 1032 aaPredicted RBP12.23□□□□□ -0.45
COL4A3-205ENST00000471862 KRT13P13646 458 aa12.23□□□□□ -0.45
COL4A3-205ENST00000471862 YWHAQP27348 245 aa12.23□□□□□ -0.45
COL4A3-205ENST00000471862 GTF2H1P32780 548 aa12.23□□□□□ -0.45
COL4A3-205ENST00000471862 PRCPP42785 496 aa12.23□□□□□ -0.45
COL4A3-205ENST00000471862 IFNAR2P48551 515 aa12.23□□□□□ -0.45
COL4A3-205ENST00000471862 SLC5A3P53794 718 aa12.23□□□□□ -0.45
COL4A3-205ENST00000471862 NRLP54845 237 aa12.23□□□□□ -0.45
COL4A3-205ENST00000471862 ORC1Q13415 861 aa12.23□□□□□ -0.45
COL4A3-205ENST00000471862 PPP2R5DQ14738 602 aa12.23□□□□□ -0.45
COL4A3-205ENST00000471862 ZNF658Q5TYW1 1059 aaPredicted RBP12.23□□□□□ -0.45
COL4A3-205ENST00000471862 SNX30Q5VWJ9 437 aa12.23□□□□□ -0.45
COL4A3-205ENST00000471862 NAIF1Q69YI7 327 aaPredicted RBP12.23□□□□□ -0.45
COL4A3-205ENST00000471862 PKN3Q6P5Z2 889 aa12.23□□□□□ -0.45
COL4A3-205ENST00000471862 PDZD8Q8NEN9 1154 aa12.23□□□□□ -0.45
COL4A3-205ENST00000471862 RUBCNQ92622 972 aa12.23□□□□□ -0.45
COL4A3-205ENST00000471862 ATP2A3Q93084 1043 aa12.23□□□□□ -0.45
COL4A3-205ENST00000471862 SMARCD1Q96GM5 515 aa12.23□□□□□ -0.45
COL4A3-205ENST00000471862 TIGD1Q96MW7 591 aa12.23□□□□□ -0.45
COL4A3-205ENST00000471862 SLITRK1Q96PX8 696 aa12.23□□□□□ -0.45
COL4A3-205ENST00000471862 GSDMAQ96QA5 445 aa12.23□□□□□ -0.45
COL4A3-205ENST00000471862 TWNKQ96RR1 684 aa12.23□□□□□ -0.45
COL4A3-205ENST00000471862 SMOQ99835 787 aa12.23□□□□□ -0.45
COL4A3-205ENST00000471862 CYP3A43Q9HB55 503 aa12.23□□□□□ -0.45
COL4A3-205ENST00000471862 DMAP1Q9NPF5 467 aaPredicted RBP12.23□□□□□ -0.45
COL4A3-205ENST00000471862 RMND1Q9NWS8 449 aa12.23□□□□□ -0.45
COL4A3-205ENST00000471862 CPQQ9Y646 472 aa12.23□□□□□ -0.45
COL4A3-205ENST00000471862 EML5Q05BV3 1969 aa12.22□□□□□ -0.45
COL4A3-205ENST00000471862 CILPO75339 1184 aa12.22□□□□□ -0.45
COL4A3-205ENST00000471862 AP1G2O75843 785 aa12.22□□□□□ -0.45
COL4A3-205ENST00000471862 BEST1O76090 585 aa12.22□□□□□ -0.45
COL4A3-205ENST00000471862 CLSTN1O94985 981 aa12.22□□□□□ -0.45
COL4A3-205ENST00000471862 ZDHHC11BP0C7U3 371 aa12.22□□□□□ -0.45
COL4A3-205ENST00000471862 CCDC130P13994 396 aa12.22□□□□□ -0.45
COL4A3-205ENST00000471862 HOXA6P31267 233 aa12.22□□□□□ -0.45
COL4A3-205ENST00000471862 HOXC13P31276 330 aa12.22□□□□□ -0.45
COL4A3-205ENST00000471862 GALK1P51570 392 aa12.22□□□□□ -0.45
COL4A3-205ENST00000471862 AMPD2Q01433 879 aa12.22□□□□□ -0.45
COL4A3-205ENST00000471862 DMWDQ09019 674 aa12.22□□□□□ -0.45
COL4A3-205ENST00000471862 GAB4Q2WGN9 574 aa12.22□□□□□ -0.45
COL4A3-205ENST00000471862 KRT39Q6A163 491 aa12.22□□□□□ -0.45
COL4A3-205ENST00000471862 CPA6Q8N4T0 437 aa12.22□□□□□ -0.45
COL4A3-205ENST00000471862 DCLK2Q8N568 766 aa12.22□□□□□ -0.45
COL4A3-205ENST00000471862 C12orf29Q8N999 325 aa12.22□□□□□ -0.45
COL4A3-205ENST00000471862 SCAMP5Q8TAC9 235 aa12.22□□□□□ -0.45
COL4A3-205ENST00000471862 SLC2A14Q8TDB8 520 aa12.22□□□□□ -0.45
COL4A3-205ENST00000471862 WHAMMQ8TF30 809 aa12.22□□□□□ -0.45
COL4A3-205ENST00000471862 EZH1Q92800 747 aaPredicted RBP12.22□□□□□ -0.45
COL4A3-205ENST00000471862 FBXO32Q969P5 355 aa12.22□□□□□ -0.45
COL4A3-205ENST00000471862 EEF2KMTQ96G04 330 aa12.22□□□□□ -0.45
COL4A3-205ENST00000471862 FAXDC2Q96IV6 333 aa12.22□□□□□ -0.45
COL4A3-205ENST00000471862 ZFRQ96KR1 1074 aaKnown RBP12.22□□□□□ -0.45
COL4A3-205ENST00000471862 MED10Q9BTT4 135 aa12.22□□□□□ -0.45
COL4A3-205ENST00000471862 NIF3L1Q9GZT8 377 aa12.22□□□□□ -0.45
COL4A3-205ENST00000471862 LINC00597Q9H2U6 94 aa12.22□□□□□ -0.45
COL4A3-205ENST00000471862 KRT82Q9NSB4 513 aa12.22□□□□□ -0.45
COL4A3-205ENST00000471862 COMMD8Q9NX08 183 aa12.22□□□□□ -0.45
COL4A3-205ENST00000471862 SMG5Q9UPR3 1016 aaKnown RBP12.22□□□□□ -0.45
COL4A3-205ENST00000471862 PCDHA5Q9Y5H7 936 aa12.22□□□□□ -0.45
COL4A3-205ENST00000471862 DMXL1Q9Y485 3027 aa12.21□□□□□ -0.45
COL4A3-205ENST00000471862 GOLGA6L4A6NEF3 574 aa12.21□□□□□ -0.45
COL4A3-205ENST00000471862 CHURC1-FNTBB4DL54 471 aa12.21□□□□□ -0.45
COL4A3-205ENST00000471862 HHLA1C9JL84 531 aa12.21□□□□□ -0.45
COL4A3-205ENST00000471862 CETN3O15182 167 aa12.21□□□□□ -0.45
COL4A3-205ENST00000471862 EGFP01133 1207 aa12.21□□□□□ -0.45
COL4A3-205ENST00000471862 DRD1P21728 446 aa12.21□□□□□ -0.45
COL4A3-205ENST00000471862 PMS1P54277 932 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms