RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 DDX43Q9NXZ2 648 aaKnown RBP9.69□□□□□ -0.86
SF3A1-206ENST00000471037 CGNQ9P2M7 1197 aaKnown RBP9.69□□□□□ -0.86
SF3A1-206ENST00000471037 MAGED2Q9UNF1 606 aaPredicted RBP9.69□□□□□ -0.86
SF3A1-206ENST00000471037 BCLAF3A2AJT9 711 aaKnown RBP9.68□□□□□ -0.86
SF3A1-206ENST00000471037 GOLGA6L3A6NEY3 463 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 PDXKO00764 312 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 CALUO43852 315 aaPredicted RBP9.68□□□□□ -0.86
SF3A1-206ENST00000471037 HUS1O60921 280 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 RHOBTB1O94844 696 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 FGFR1OPO95684 399 aaKnown RBP9.68□□□□□ -0.86
SF3A1-206ENST00000471037 APBB3O95704 486 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 LDHAP00338 332 aaKnown RBP9.68□□□□□ -0.86
SF3A1-206ENST00000471037 ITGB3P05106 788 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 CKMP06732 381 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 USP17L7P0C7H9 530 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 CYP2F1P24903 491 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 POLR2BP30876 1174 aaKnown RBP9.68□□□□□ -0.86
SF3A1-206ENST00000471037 HOXD13P35453 343 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 WNT7BP56706 349 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 STX17P56962 302 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 MYL7Q01449 175 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 C1QBPQ07021 282 aaKnown RBP9.68□□□□□ -0.86
SF3A1-206ENST00000471037 DMC1Q14565 340 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 NFIL3Q16649 462 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 DDR2Q16832 855 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 TPD52L1Q16890 204 aaPredicted RBP9.68□□□□□ -0.86
SF3A1-206ENST00000471037 EML3Q32P44 896 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 EDRF1Q3B7T1 1238 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 ZCWPW2Q504Y3 356 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 SDHAF4Q5VUM1 108 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 RNF43Q68DV7 783 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 NAIF1Q69YI7 327 aaPredicted RBP9.68□□□□□ -0.86
SF3A1-206ENST00000471037 HS2ST1Q7LGA3 356 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 LUZP1Q86V48 1076 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 C11orf74Q86VG3 221 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 DHX40Q8IX18 779 aaKnown RBP9.68□□□□□ -0.86
SF3A1-206ENST00000471037 SYCP3Q8IZU3 236 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 RNF214Q8ND24 703 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 RPLP0P6Q8NHW5 317 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 CCDC26Q8TAB7 109 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 NOC3LQ8WTT2 800 aaKnown RBP9.68□□□□□ -0.86
SF3A1-206ENST00000471037 SLC22A12Q96S37 553 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 RBSNQ9H1K0 784 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 IKZF4Q9H2S9 585 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 SMOC1Q9H4F8 434 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 POLR3BQ9NW08 1133 aaPredicted RBP9.68□□□□□ -0.86
SF3A1-206ENST00000471037 DUS2Q9NX74 493 aaKnown RBP9.68□□□□□ -0.86
SF3A1-206ENST00000471037 GCNT4Q9P109 453 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 ITGA11Q9UKX5 1188 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 AGAP1Q9UPQ3 857 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 TRAF3IP3Q9Y228 551 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 CNOT1A5YKK6 2376 aaKnown RBP9.68□□□□□ -0.86
SF3A1-206ENST00000471037 KIAA1549LQ6ZVL6 1849 aa9.68□□□□□ -0.86
SF3A1-206ENST00000471037 TRAV19A0A0A6YYK7 116 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 TRIM49BA6NDI0 452 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 GABRDO14764 452 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 PFKLP17858 780 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 GARTP22102 1010 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 ACAT1P24752 427 aaKnown RBP9.67□□□□□ -0.86
SF3A1-206ENST00000471037 RPL13P26373 211 aaKnown RBP9.67□□□□□ -0.86
SF3A1-206ENST00000471037 PCSK1P29120 753 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 MAGEA11P43364 429 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 IFNAR2P48551 515 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 LHX1P48742 406 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 PMS1P54277 932 aaKnown RBP9.67□□□□□ -0.86
SF3A1-206ENST00000471037 TFAMQ00059 246 aaKnown RBP9.67□□□□□ -0.86
SF3A1-206ENST00000471037 FKBP3Q00688 224 aaKnown RBP9.67□□□□□ -0.86
SF3A1-206ENST00000471037 KCNA1Q09470 495 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 NR1H3Q13133 447 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 NCAPHQ15003 741 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 PMS2CLQ68D20 193 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 ANKRD40Q6AI12 368 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 TCEAL6Q6IPX3 200 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 LIMS2Q7Z4I7 341 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 OSTM1Q86WC4 334 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 C12orf56Q8IXR9 622 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 TOP6BLQ8N6T0 577 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 ZSWIM2Q8NEG5 633 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 CACTINQ8WUQ7 758 aaKnown RBP9.67□□□□□ -0.86
SF3A1-206ENST00000471037 TMEM174Q8WUU8 243 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 TCEAL3Q969E4 200 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 CEP295NLQ96MC4 621 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 MED15Q96RN5 788 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 CYP2S1Q96SQ9 504 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 FAM213AQ9BRX8 229 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 EDEM2Q9BV94 578 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 THAP9Q9H5L6 903 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 TRPC7Q9HCX4 862 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 RBAKQ9NYW8 714 aaPredicted RBP9.67□□□□□ -0.86
SF3A1-206ENST00000471037 GTF3C4Q9UKN8 822 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 ARHGAP26Q9UNA1 814 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 NFE2L3Q9Y4A8 694 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 WNT6Q9Y6F9 365 aa9.67□□□□□ -0.86
SF3A1-206ENST00000471037 LNP1A1A4G5 178 aa9.66□□□□□ -0.86
SF3A1-206ENST00000471037 C2orf78A6NCI8 922 aa9.66□□□□□ -0.86
SF3A1-206ENST00000471037 DCLK1O15075 740 aa9.66□□□□□ -0.86
SF3A1-206ENST00000471037 TGFB1I1O43294 461 aa9.66□□□□□ -0.86
SF3A1-206ENST00000471037 NFATC1O95644 943 aa9.66□□□□□ -0.86
SF3A1-206ENST00000471037 PDE6CP51160 858 aa9.66□□□□□ -0.86
SF3A1-206ENST00000471037 CREB5Q02930 508 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms