RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 SLC9A1P19634 815 aa15.64■□□□□ 0.09
TMEM39A-205ENST00000468676 VIPR2P41587 438 aa15.64■□□□□ 0.09
TMEM39A-205ENST00000468676 TAF10Q12962 218 aa15.64■□□□□ 0.09
TMEM39A-205ENST00000468676 ZNF268Q14587 947 aaPredicted RBP15.64■□□□□ 0.09
TMEM39A-205ENST00000468676 ANO6Q4KMQ2 910 aa15.64■□□□□ 0.09
TMEM39A-205ENST00000468676 TXNDC8Q6A555 127 aa15.64■□□□□ 0.09
TMEM39A-205ENST00000468676 YAF2Q8IY57 180 aa15.64■□□□□ 0.09
TMEM39A-205ENST00000468676 CELF5Q8N6W0 485 aaKnown RBP15.64■□□□□ 0.09
TMEM39A-205ENST00000468676 FBXO32Q969P5 355 aa15.64■□□□□ 0.09
TMEM39A-205ENST00000468676 KREMEN1Q96MU8 473 aa15.64■□□□□ 0.09
TMEM39A-205ENST00000468676 KIF9Q9HAQ2 790 aa15.64■□□□□ 0.09
TMEM39A-205ENST00000468676 TDP1Q9NUW8 608 aa15.64■□□□□ 0.09
TMEM39A-205ENST00000468676 HESX1Q9UBX0 185 aa15.64■□□□□ 0.09
TMEM39A-205ENST00000468676 ZNF840PA6NDX5 716 aa15.63■□□□□ 0.09
TMEM39A-205ENST00000468676 BEST1O76090 585 aa15.63■□□□□ 0.09
TMEM39A-205ENST00000468676 CDK11BP21127 795 aaKnown RBP15.63■□□□□ 0.09
TMEM39A-205ENST00000468676 ZNF132P52740 706 aa15.63■□□□□ 0.09
TMEM39A-205ENST00000468676 BCAT1P54687 386 aa15.63■□□□□ 0.09
TMEM39A-205ENST00000468676 GPC5P78333 572 aa15.63■□□□□ 0.09
TMEM39A-205ENST00000468676 CNGA2Q16280 664 aa15.63■□□□□ 0.09
TMEM39A-205ENST00000468676 FKBP15Q5T1M5 1219 aa15.63■□□□□ 0.09
TMEM39A-205ENST00000468676 SNX30Q5VWJ9 437 aa15.63■□□□□ 0.09
TMEM39A-205ENST00000468676 LCLAT1Q6UWP7 414 aa15.63■□□□□ 0.09
TMEM39A-205ENST00000468676 VITQ6UXI7 678 aa15.63■□□□□ 0.09
TMEM39A-205ENST00000468676 RBBP8NLQ8NC74 664 aaPredicted RBP15.63■□□□□ 0.09
TMEM39A-205ENST00000468676 ST13P5Q8NFI4 369 aaPredicted RBP15.63■□□□□ 0.09
TMEM39A-205ENST00000468676 SCAMP5Q8TAC9 235 aa15.63■□□□□ 0.09
TMEM39A-205ENST00000468676 DNASE1L2Q92874 299 aa15.63■□□□□ 0.09
TMEM39A-205ENST00000468676 IRF7Q92985 503 aa15.63■□□□□ 0.09
TMEM39A-205ENST00000468676 KAT5Q92993 513 aa15.63■□□□□ 0.09
TMEM39A-205ENST00000468676 PBXIP1Q96AQ6 731 aa15.63■□□□□ 0.09
TMEM39A-205ENST00000468676 PLA2G2FQ9BZM2 168 aa15.63■□□□□ 0.09
TMEM39A-205ENST00000468676 SMOC2Q9H3U7 446 aa15.63■□□□□ 0.09
TMEM39A-205ENST00000468676 TRPC7Q9HCX4 862 aa15.63■□□□□ 0.09
TMEM39A-205ENST00000468676 C11orf16Q9NQ32 467 aa15.63■□□□□ 0.09
TMEM39A-205ENST00000468676 TRPV5Q9NQA5 729 aa15.63■□□□□ 0.09
TMEM39A-205ENST00000468676 THG1LQ9NWX6 298 aaKnown RBP15.63■□□□□ 0.09
TMEM39A-205ENST00000468676 SCML2Q9UQR0 700 aa15.63■□□□□ 0.09
TMEM39A-205ENST00000468676 PATJQ8NI35 1801 aa15.63■□□□□ 0.09
TMEM39A-205ENST00000468676 FAM86C2PA6NEL3 165 aa15.62■□□□□ 0.09
TMEM39A-205ENST00000468676 HHLA1C9JL84 531 aa15.62■□□□□ 0.09
TMEM39A-205ENST00000468676 ZNF263O14978 683 aa15.62■□□□□ 0.09
TMEM39A-205ENST00000468676 CAVIN2O95810 425 aa15.62■□□□□ 0.09
TMEM39A-205ENST00000468676 CKMP06732 381 aa15.62■□□□□ 0.09
TMEM39A-205ENST00000468676 CFHP08603 1231 aa15.62■□□□□ 0.09
TMEM39A-205ENST00000468676 SETSIPP0DME0 302 aa15.62■□□□□ 0.09
TMEM39A-205ENST00000468676 KRT5P13647 590 aa15.62■□□□□ 0.09
TMEM39A-205ENST00000468676 HDCP19113 662 aa15.62■□□□□ 0.09
TMEM39A-205ENST00000468676 RFX1P22670 979 aa15.62■□□□□ 0.09
TMEM39A-205ENST00000468676 TUBP50607 506 aa15.62■□□□□ 0.09
TMEM39A-205ENST00000468676 PLCB2Q00722 1185 aa15.62■□□□□ 0.09
TMEM39A-205ENST00000468676 FCHO2Q0JRZ9 810 aa15.62■□□□□ 0.09
TMEM39A-205ENST00000468676 BST2Q10589 180 aaKnown RBP15.62■□□□□ 0.09
TMEM39A-205ENST00000468676 IFRD2Q12894 506 aaPredicted RBP15.62■□□□□ 0.09
TMEM39A-205ENST00000468676 KRT31Q15323 416 aa15.62■□□□□ 0.09
TMEM39A-205ENST00000468676 GOLGA7BQ2TAP0 167 aa15.62■□□□□ 0.09
TMEM39A-205ENST00000468676 BPIFB1Q8TDL5 484 aa15.62■□□□□ 0.09
TMEM39A-205ENST00000468676 SHDQ96IW2 340 aa15.62■□□□□ 0.09
TMEM39A-205ENST00000468676 LRFN3Q9BTN0 628 aa15.62■□□□□ 0.09
TMEM39A-205ENST00000468676 MFSD1Q9H3U5 465 aa15.62■□□□□ 0.09
TMEM39A-205ENST00000468676 BRD9Q9H8M2 597 aa15.62■□□□□ 0.09
TMEM39A-205ENST00000468676 TLR8Q9NR97 1041 aaKnown RBP15.62■□□□□ 0.09
TMEM39A-205ENST00000468676 TAB2Q9NYJ8 693 aa15.62■□□□□ 0.09
TMEM39A-205ENST00000468676 LIMA1Q9UHB6 759 aaKnown RBP15.62■□□□□ 0.09
TMEM39A-205ENST00000468676 TSPAN16Q9UKR8 245 aa15.62■□□□□ 0.09
TMEM39A-205ENST00000468676 C2orf78A6NCI8 922 aa15.61■□□□□ 0.09
TMEM39A-205ENST00000468676 LRRC10BA6NIK2 292 aa15.61■□□□□ 0.09
TMEM39A-205ENST00000468676 RNF225M0QZC1 329 aaPredicted RBP15.61■□□□□ 0.09
TMEM39A-205ENST00000468676 O00370 1275 aa15.61■□□□□ 0.09
TMEM39A-205ENST00000468676 XPO1O14980 1071 aaKnown RBP15.61■□□□□ 0.09
TMEM39A-205ENST00000468676 CHADO15335 359 aa15.61■□□□□ 0.09
TMEM39A-205ENST00000468676 PRAMEF12O95522 483 aa15.61■□□□□ 0.09
TMEM39A-205ENST00000468676 ABL1P00519 1130 aa15.61■□□□□ 0.09
TMEM39A-205ENST00000468676 ZNF18P17022 549 aa15.61■□□□□ 0.09
TMEM39A-205ENST00000468676 GDI1P31150 447 aa15.61■□□□□ 0.09
TMEM39A-205ENST00000468676 ZNF165P49910 485 aa15.61■□□□□ 0.09
TMEM39A-205ENST00000468676 KIF11P52732 1056 aa15.61■□□□□ 0.09
TMEM39A-205ENST00000468676 NCAPHQ15003 741 aa15.61■□□□□ 0.09
TMEM39A-205ENST00000468676 ARHGAP29Q52LW3 1261 aa15.61■□□□□ 0.09
TMEM39A-205ENST00000468676 HECTD3Q5T447 861 aa15.61■□□□□ 0.09
TMEM39A-205ENST00000468676 SIX5Q8N196 739 aa15.61■□□□□ 0.09
TMEM39A-205ENST00000468676 AOPEPQ8N6M6 819 aa15.61■□□□□ 0.09
TMEM39A-205ENST00000468676 KIAA1958Q8N8K9 716 aa15.61■□□□□ 0.09
TMEM39A-205ENST00000468676 ARL14EPQ8N8R7 260 aaPredicted RBP15.61■□□□□ 0.09
TMEM39A-205ENST00000468676 USP13Q92995 863 aaPredicted RBP15.61■□□□□ 0.09
TMEM39A-205ENST00000468676 VPS16Q9H269 839 aa15.61■□□□□ 0.09
TMEM39A-205ENST00000468676 SIX2Q9NPC8 291 aa15.61■□□□□ 0.09
TMEM39A-205ENST00000468676 CHORDC1Q9UHD1 332 aaPredicted RBP15.61■□□□□ 0.09
TMEM39A-205ENST00000468676 DAAM1Q9Y4D1 1078 aa15.61■□□□□ 0.09
TMEM39A-205ENST00000468676 ZDBF2Q9HCK1 2354 aa15.61■□□□□ 0.09
TMEM39A-205ENST00000468676 SYCE3A1L190 88 aa15.6■□□□□ 0.09
TMEM39A-205ENST00000468676 MED7O43513 233 aa15.6■□□□□ 0.09
TMEM39A-205ENST00000468676 OAS1P00973 400 aaKnown RBP15.6■□□□□ 0.09
TMEM39A-205ENST00000468676 ZDHHC11BP0C7U3 371 aa15.6■□□□□ 0.09
TMEM39A-205ENST00000468676 TCF3P15923 654 aa15.6■□□□□ 0.09
TMEM39A-205ENST00000468676 PSEN1P49768 467 aa15.6■□□□□ 0.09
TMEM39A-205ENST00000468676 MLLT6P55198 1093 aaPredicted RBP15.6■□□□□ 0.09
TMEM39A-205ENST00000468676 SLC7A9P82251 487 aa15.6■□□□□ 0.09
TMEM39A-205ENST00000468676 PRKCQQ04759 706 aa15.6■□□□□ 0.09
TMEM39A-205ENST00000468676 GRM2Q14416 872 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms