RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 C8orf48Q96LL4 319 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 CEP63Q96MT8 703 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 LRRC3BQ96PB8 259 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 OCSTAMPQ9BR26 566 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 TTLL2Q9BWV7 592 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 SLC46A2Q9BY10 475 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 B3GNT5Q9BYG0 378 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 CYP3A43Q9HB55 503 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 ARHGEF3Q9NR81 526 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 UXTQ9UBK9 157 aaPredicted RBP11.87□□□□□ -0.51
COL4A6-205ENST00000468338 FBXL21Q9UKT6 434 aa11.87□□□□□ -0.51
COL4A6-205ENST00000468338 COL4A2P08572 1712 aa11.86□□□□□ -0.51
COL4A6-205ENST00000468338 HEPACAM2A8MVW5 462 aa11.86□□□□□ -0.51
COL4A6-205ENST00000468338 PMM2O15305 246 aa11.86□□□□□ -0.51
COL4A6-205ENST00000468338 STX10O60499 249 aa11.86□□□□□ -0.51
COL4A6-205ENST00000468338 DDX6P26196 483 aaKnown RBP eCLIP11.86□□□□□ -0.51
COL4A6-205ENST00000468338 VIPR2P41587 438 aa11.86□□□□□ -0.51
COL4A6-205ENST00000468338 PIK3CAP42336 1068 aa11.86□□□□□ -0.51
COL4A6-205ENST00000468338 MXI1P50539 228 aa11.86□□□□□ -0.51
COL4A6-205ENST00000468338 ATP1A2P50993 1020 aa11.86□□□□□ -0.51
COL4A6-205ENST00000468338 CACNA2D1P54289 1103 aa11.86□□□□□ -0.51
COL4A6-205ENST00000468338 CYP27A1Q02318 531 aa11.86□□□□□ -0.51
COL4A6-205ENST00000468338 TAF12Q16514 161 aa11.86□□□□□ -0.51
COL4A6-205ENST00000468338 SLC44A4Q53GD3 710 aa11.86□□□□□ -0.51
COL4A6-205ENST00000468338 ARHGAP15Q53QZ3 475 aa11.86□□□□□ -0.51
COL4A6-205ENST00000468338 GPR158Q5T848 1215 aa11.86□□□□□ -0.51
COL4A6-205ENST00000468338 FRMD5Q7Z6J6 570 aa11.86□□□□□ -0.51
COL4A6-205ENST00000468338 MON1AQ86VX9 555 aa11.86□□□□□ -0.51
COL4A6-205ENST00000468338 FUKQ8N0W3 1084 aa11.86□□□□□ -0.51
COL4A6-205ENST00000468338 FBXL13Q8NEE6 735 aa11.86□□□□□ -0.51
COL4A6-205ENST00000468338 DNASE1L2Q92874 299 aa11.86□□□□□ -0.51
COL4A6-205ENST00000468338 SLC35C1Q96A29 364 aa11.86□□□□□ -0.51
COL4A6-205ENST00000468338 TNIP3Q96KP6 325 aa11.86□□□□□ -0.51
COL4A6-205ENST00000468338 PRRX2Q99811 253 aa11.86□□□□□ -0.51
COL4A6-205ENST00000468338 TRMT61BQ9BVS5 477 aaKnown RBP11.86□□□□□ -0.51
COL4A6-205ENST00000468338 ZNF518BQ9C0D4 1074 aa11.86□□□□□ -0.51
COL4A6-205ENST00000468338 ELOVL4Q9GZR5 314 aa11.86□□□□□ -0.51
COL4A6-205ENST00000468338 FAM124BQ9H5Z6 455 aaPredicted RBP11.86□□□□□ -0.51
COL4A6-205ENST00000468338 METTL14Q9HCE5 456 aaKnown RBP11.86□□□□□ -0.51
COL4A6-205ENST00000468338 CACNA1IQ9P0X4 2223 aa11.86□□□□□ -0.51
COL4A6-205ENST00000468338 KIF26AQ9ULI4 1882 aaPredicted RBP11.85□□□□□ -0.51
COL4A6-205ENST00000468338 F8VP50 259 aa11.85□□□□□ -0.51
COL4A6-205ENST00000468338 PI15O43692 258 aa11.85□□□□□ -0.51
COL4A6-205ENST00000468338 PRAMEF12O95522 483 aa11.85□□□□□ -0.51
COL4A6-205ENST00000468338 ADH1BP00325 375 aa11.85□□□□□ -0.51
COL4A6-205ENST00000468338 NDST1P52848 882 aa11.85□□□□□ -0.51
COL4A6-205ENST00000468338 MLLT6P55198 1093 aaPredicted RBP11.85□□□□□ -0.51
COL4A6-205ENST00000468338 MARSP56192 900 aaKnown RBP11.85□□□□□ -0.51
COL4A6-205ENST00000468338 CYP4F8P98187 520 aa11.85□□□□□ -0.51
COL4A6-205ENST00000468338 PRKCQQ04759 706 aa11.85□□□□□ -0.51
COL4A6-205ENST00000468338 MLF2Q15773 248 aaPredicted RBP11.85□□□□□ -0.51
COL4A6-205ENST00000468338 CBWD6Q4V339 395 aa11.85□□□□□ -0.51
COL4A6-205ENST00000468338 CBWD3Q5JTY5 395 aa11.85□□□□□ -0.51
COL4A6-205ENST00000468338 CBWD5Q5RIA9 395 aa11.85□□□□□ -0.51
COL4A6-205ENST00000468338 DENND5BQ6ZUT9 1274 aa11.85□□□□□ -0.51
COL4A6-205ENST00000468338 SCN4BQ8IWT1 228 aa11.85□□□□□ -0.51
COL4A6-205ENST00000468338 CMTM8Q8IZV2 173 aa11.85□□□□□ -0.51
COL4A6-205ENST00000468338 STKLD1Q8NE28 680 aa11.85□□□□□ -0.51
COL4A6-205ENST00000468338 PRSS33Q8NF86 280 aa11.85□□□□□ -0.51
COL4A6-205ENST00000468338 WHAMMQ8TF30 809 aa11.85□□□□□ -0.51
COL4A6-205ENST00000468338 NELFBQ8WX92 580 aa11.85□□□□□ -0.51
COL4A6-205ENST00000468338 IRF7Q92985 503 aa11.85□□□□□ -0.51
COL4A6-205ENST00000468338 SHDQ96IW2 340 aa11.85□□□□□ -0.51
COL4A6-205ENST00000468338 GCNAQ96QF7 691 aa11.85□□□□□ -0.51
COL4A6-205ENST00000468338 TWNKQ96RR1 684 aa11.85□□□□□ -0.51
COL4A6-205ENST00000468338 IMPG2Q9BZV3 1241 aa11.85□□□□□ -0.51
COL4A6-205ENST00000468338 NIF3L1Q9GZT8 377 aa11.85□□□□□ -0.51
COL4A6-205ENST00000468338 MFSD1Q9H3U5 465 aa11.85□□□□□ -0.51
COL4A6-205ENST00000468338 SLITRK6Q9H5Y7 841 aa11.85□□□□□ -0.51
COL4A6-205ENST00000468338 TBC1D17Q9HA65 648 aa11.85□□□□□ -0.51
COL4A6-205ENST00000468338 PRDM9Q9NQV7 894 aa11.85□□□□□ -0.51
COL4A6-205ENST00000468338 RAB20Q9NX57 234 aa11.85□□□□□ -0.51
COL4A6-205ENST00000468338 IL37Q9NZH6 218 aa11.85□□□□□ -0.51
COL4A6-205ENST00000468338 ARMCX3Q9UH62 379 aaPredicted RBP11.85□□□□□ -0.51
COL4A6-205ENST00000468338 CA14Q9ULX7 337 aa11.85□□□□□ -0.51
COL4A6-205ENST00000468338 BICDL2A1A5D9 508 aa11.84□□□□□ -0.51
COL4A6-205ENST00000468338 BIN1O00499 593 aa11.84□□□□□ -0.51
COL4A6-205ENST00000468338 CLDN5O00501 218 aa11.84□□□□□ -0.51
COL4A6-205ENST00000468338 CHADO15335 359 aa11.84□□□□□ -0.51
COL4A6-205ENST00000468338 PFKLP17858 780 aa11.84□□□□□ -0.51
COL4A6-205ENST00000468338 GRIK1P39086 918 aa11.84□□□□□ -0.51
COL4A6-205ENST00000468338 TCF15Q12870 199 aa11.84□□□□□ -0.51
COL4A6-205ENST00000468338 GRM2Q14416 872 aa11.84□□□□□ -0.51
COL4A6-205ENST00000468338 ZNF268Q14587 947 aaPredicted RBP11.84□□□□□ -0.51
COL4A6-205ENST00000468338 TXNDC8Q6A555 127 aa11.84□□□□□ -0.51
COL4A6-205ENST00000468338 SCARA5Q6ZMJ2 495 aa11.84□□□□□ -0.51
COL4A6-205ENST00000468338 NYAP1Q6ZVC0 841 aa11.84□□□□□ -0.51
COL4A6-205ENST00000468338 ACOT1Q86TX2 421 aa11.84□□□□□ -0.51
COL4A6-205ENST00000468338 FAM35AQ86V20 835 aa11.84□□□□□ -0.51
COL4A6-205ENST00000468338 FLCNQ8NFG4 579 aa11.84□□□□□ -0.51
COL4A6-205ENST00000468338 MRPS31Q92665 395 aaKnown RBP11.84□□□□□ -0.51
COL4A6-205ENST00000468338 MED15Q96RN5 788 aa11.84□□□□□ -0.51
COL4A6-205ENST00000468338 OSBPL6Q9BZF3 934 aa11.84□□□□□ -0.51
COL4A6-205ENST00000468338 BRD9Q9H8M2 597 aa11.84□□□□□ -0.51
COL4A6-205ENST00000468338 CSNK1G1Q9HCP0 422 aa11.84□□□□□ -0.51
COL4A6-205ENST00000468338 LMBRD1Q9NUN5 540 aa11.84□□□□□ -0.51
COL4A6-205ENST00000468338 EHD2Q9NZN4 543 aa11.84□□□□□ -0.51
COL4A6-205ENST00000468338 GCNT4Q9P109 453 aa11.84□□□□□ -0.51
COL4A6-205ENST00000468338 DLGAP2Q9P1A6 1054 aa11.84□□□□□ -0.51
COL4A6-205ENST00000468338 HMGXB4Q9UGU5 601 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms