RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 NUP62CLQ9H1M0 184 aa5.12□□□□□ -1.59
SMC4-207ENST00000467263 DDX21Q9NR30 783 aaKnown RBP eCLIP5.12□□□□□ -1.59
SMC4-207ENST00000467263 SERTAD4Q9NUC0 356 aa5.12□□□□□ -1.59
SMC4-207ENST00000467263 SERGEFQ9UGK8 458 aa5.12□□□□□ -1.59
SMC4-207ENST00000467263 ITGB1BP2Q9UKP3 347 aa5.12□□□□□ -1.59
SMC4-207ENST00000467263 CORO2BQ9UQ03 480 aa5.12□□□□□ -1.59
SMC4-207ENST00000467263 SNX14Q9Y5W7 946 aa5.12□□□□□ -1.59
SMC4-207ENST00000467263 FER1L4A9Z1Z3 1794 aa5.11□□□□□ -1.59
SMC4-207ENST00000467263 RAB27BO00194 218 aa5.11□□□□□ -1.59
SMC4-207ENST00000467263 RASAL1O95294 804 aa5.11□□□□□ -1.59
SMC4-207ENST00000467263 IL1R1P14778 569 aa5.11□□□□□ -1.59
SMC4-207ENST00000467263 ENGP17813 658 aa5.11□□□□□ -1.59
SMC4-207ENST00000467263 DRD4P21917 467 aa5.11□□□□□ -1.59
SMC4-207ENST00000467263 MAPK7Q13164 816 aa5.11□□□□□ -1.59
SMC4-207ENST00000467263 EZH2Q15910 746 aaKnown RBP5.11□□□□□ -1.59
SMC4-207ENST00000467263 COBLL1Q53SF7 1204 aa5.11□□□□□ -1.59
SMC4-207ENST00000467263 MTX3Q5HYI7 312 aa5.11□□□□□ -1.59
SMC4-207ENST00000467263 ZNF626Q68DY1 528 aa5.11□□□□□ -1.59
SMC4-207ENST00000467263 SLC9A4Q6AI14 798 aa5.11□□□□□ -1.59
SMC4-207ENST00000467263 CCAR1Q8IX12 1150 aaKnown RBP5.11□□□□□ -1.59
SMC4-207ENST00000467263 SPARTQ8N0X7 666 aa5.11□□□□□ -1.59
SMC4-207ENST00000467263 ABRAQ8N0Z2 381 aa5.11□□□□□ -1.59
SMC4-207ENST00000467263 DNAJB14Q8TBM8 379 aa5.11□□□□□ -1.59
SMC4-207ENST00000467263 KRTAP1-5Q9BYS1 174 aa5.11□□□□□ -1.59
SMC4-207ENST00000467263 CHST8Q9H2A9 424 aa5.11□□□□□ -1.59
SMC4-207ENST00000467263 XPNPEP3Q9NQH7 507 aa5.11□□□□□ -1.59
SMC4-207ENST00000467263 MID2Q9UJV3 735 aa5.11□□□□□ -1.59
SMC4-207ENST00000467263 CCNL1Q9UK58 526 aaPredicted RBP5.11□□□□□ -1.59
SMC4-207ENST00000467263 PAXBP1Q9Y5B6 917 aa5.11□□□□□ -1.59
SMC4-207ENST00000467263 CDY1Q9Y6F8 540 aa5.11□□□□□ -1.59
SMC4-207ENST00000467263 LOC102723971A0A1B0GUV8 181 aa5.1□□□□□ -1.59
SMC4-207ENST00000467263 H0YIZ8 118 aa5.1□□□□□ -1.59
SMC4-207ENST00000467263 GCOM1H8Y6P7 765 aaPredicted RBP5.1□□□□□ -1.59
SMC4-207ENST00000467263 KIF3BO15066 747 aa5.1□□□□□ -1.59
SMC4-207ENST00000467263 RGS10O43665 173 aa5.1□□□□□ -1.59
SMC4-207ENST00000467263 SRGAP2O75044 1071 aa5.1□□□□□ -1.59
SMC4-207ENST00000467263 FAM163BP0C2L3 166 aa5.1□□□□□ -1.59
SMC4-207ENST00000467263 PRR35P0CG20 571 aa5.1□□□□□ -1.59
SMC4-207ENST00000467263 PTDSS1P48651 473 aaKnown RBP5.1□□□□□ -1.59
SMC4-207ENST00000467263 INSCQ1MX18 579 aa5.1□□□□□ -1.59
SMC4-207ENST00000467263 C11orf87Q6NUJ2 197 aa5.1□□□□□ -1.59
SMC4-207ENST00000467263 DPY19L3Q6ZPD9 716 aa5.1□□□□□ -1.59
SMC4-207ENST00000467263 UNC13DQ70J99 1090 aa5.1□□□□□ -1.59
SMC4-207ENST00000467263 IZUMO1Q8IYV9 350 aa5.1□□□□□ -1.59
SMC4-207ENST00000467263 C17orf80Q9BSJ5 609 aa5.1□□□□□ -1.59
SMC4-207ENST00000467263 DUSP22Q9NRW4 184 aa5.1□□□□□ -1.59
SMC4-207ENST00000467263 TRMT13Q9NUP7 481 aaKnown RBP5.1□□□□□ -1.59
SMC4-207ENST00000467263 DLL3Q9NYJ7 618 aa5.1□□□□□ -1.59
SMC4-207ENST00000467263 DNMT3BQ9UBC3 853 aaKnown RBP5.1□□□□□ -1.59
SMC4-207ENST00000467263 PADI4Q9UM07 663 aa5.1□□□□□ -1.59
SMC4-207ENST00000467263 LINC01548A6NM66 108 aa5.09□□□□□ -1.59
SMC4-207ENST00000467263 RHPN2P1A8MT19 583 aa5.09□□□□□ -1.59
SMC4-207ENST00000467263 QSOX1O00391 747 aa5.09□□□□□ -1.59
SMC4-207ENST00000467263 ONECUT2O95948 504 aa5.09□□□□□ -1.59
SMC4-207ENST00000467263 HNRNPCP07910 306 aaKnown RBP eCLIP5.09□□□□□ -1.59
SMC4-207ENST00000467263 NHLRC4P0CG21 123 aaPredicted RBP5.09□□□□□ -1.59
SMC4-207ENST00000467263 TXNP10599 105 aaKnown RBP5.09□□□□□ -1.59
SMC4-207ENST00000467263 CTGFP29279 349 aa5.09□□□□□ -1.59
SMC4-207ENST00000467263 PIK3CBP42338 1070 aa5.09□□□□□ -1.59
SMC4-207ENST00000467263 CARSP49589 748 aaKnown RBP5.09□□□□□ -1.59
SMC4-207ENST00000467263 SOX10P56693 466 aa5.09□□□□□ -1.59
SMC4-207ENST00000467263 SLC29A2Q14542 456 aa5.09□□□□□ -1.59
SMC4-207ENST00000467263 ETFDHQ16134 617 aa5.09□□□□□ -1.59
SMC4-207ENST00000467263 PCID2Q5JVF3 399 aa5.09□□□□□ -1.59
SMC4-207ENST00000467263 CERCAMQ5T4B2 595 aa5.09□□□□□ -1.59
SMC4-207ENST00000467263 ZNF66Q6ZN08 573 aa5.09□□□□□ -1.59
SMC4-207ENST00000467263 CAND1Q86VP6 1230 aaKnown RBP5.09□□□□□ -1.59
SMC4-207ENST00000467263 SEMA6DQ8NFY4 1073 aa5.09□□□□□ -1.59
SMC4-207ENST00000467263 SOCS4Q8WXH5 440 aa5.09□□□□□ -1.59
SMC4-207ENST00000467263 PHKBQ93100 1093 aa5.09□□□□□ -1.59
SMC4-207ENST00000467263 DPCDQ9BVM2 203 aaPredicted RBP5.09□□□□□ -1.59
SMC4-207ENST00000467263 SARGQ9BW04 601 aa5.09□□□□□ -1.59
SMC4-207ENST00000467263 BTBD1Q9H0C5 482 aa5.09□□□□□ -1.59
SMC4-207ENST00000467263 TBC1D23Q9NUY8 699 aa5.09□□□□□ -1.59
SMC4-207ENST00000467263 FLRT1Q9NZU1 646 aa5.09□□□□□ -1.59
SMC4-207ENST00000467263 SH2B3Q9UQQ2 575 aa5.09□□□□□ -1.59
SMC4-207ENST00000467263 FNDC1Q4ZHG4 1894 aaPredicted RBP5.09□□□□□ -1.6
SMC4-207ENST00000467263 ZNF804BA4D1E1 1349 aa5.08□□□□□ -1.6
SMC4-207ENST00000467263 APAF1O14727 1248 aa5.08□□□□□ -1.6
SMC4-207ENST00000467263 KPNA5O15131 536 aa5.08□□□□□ -1.6
SMC4-207ENST00000467263 CCP110O43303 1012 aa5.08□□□□□ -1.6
SMC4-207ENST00000467263 RRP9O43818 475 aaKnown RBP5.08□□□□□ -1.6
SMC4-207ENST00000467263 PIAS2O75928 621 aa5.08□□□□□ -1.6
SMC4-207ENST00000467263 ACVR2AP27037 513 aa5.08□□□□□ -1.6
SMC4-207ENST00000467263 PRKAR1BP31321 381 aa5.08□□□□□ -1.6
SMC4-207ENST00000467263 GNALP38405 381 aa5.08□□□□□ -1.6
SMC4-207ENST00000467263 CPT1AP50416 773 aa5.08□□□□□ -1.6
SMC4-207ENST00000467263 TPTEP56180 551 aa5.08□□□□□ -1.6
SMC4-207ENST00000467263 EEFSECP57772 596 aaKnown RBP5.08□□□□□ -1.6
SMC4-207ENST00000467263 STK3Q13188 491 aa5.08□□□□□ -1.6
SMC4-207ENST00000467263 CCNIQ14094 377 aa5.08□□□□□ -1.6
SMC4-207ENST00000467263 ARHGEF7Q14155 803 aa5.08□□□□□ -1.6
SMC4-207ENST00000467263 SAFBQ15424 915 aaKnown RBP eCLIP5.08□□□□□ -1.6
SMC4-207ENST00000467263 NPY5RQ15761 445 aa5.08□□□□□ -1.6
SMC4-207ENST00000467263 HSP90AB2PQ58FF8 381 aa5.08□□□□□ -1.6
SMC4-207ENST00000467263 FCRL6Q6DN72 434 aa5.08□□□□□ -1.6
SMC4-207ENST00000467263 KSR2Q6VAB6 950 aa5.08□□□□□ -1.6
SMC4-207ENST00000467263 WDR53Q7Z5U6 358 aaPredicted RBP5.08□□□□□ -1.6
SMC4-207ENST00000467263 YAF2Q8IY57 180 aa5.08□□□□□ -1.6
SMC4-207ENST00000467263 KRT78Q8N1N4 520 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms