RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 CT47B1P0C2W7 299 aaPredicted RBP4.86□□□□□ -1.63
CHMP2B-202ENST00000466696 TMEM191BP0C7N4 346 aa4.86□□□□□ -1.63
CHMP2B-202ENST00000466696 GKP32189 559 aa4.86□□□□□ -1.63
CHMP2B-202ENST00000466696 ARFIP2P53365 341 aa4.86□□□□□ -1.63
CHMP2B-202ENST00000466696 GHRHRQ02643 423 aa4.86□□□□□ -1.63
CHMP2B-202ENST00000466696 RAPGEF1Q13905 1077 aa4.86□□□□□ -1.63
CHMP2B-202ENST00000466696 TMEM63BQ5T3F8 832 aa4.86□□□□□ -1.63
CHMP2B-202ENST00000466696 CERCAMQ5T4B2 595 aa4.86□□□□□ -1.63
CHMP2B-202ENST00000466696 DPY19L3Q6ZPD9 716 aa4.86□□□□□ -1.63
CHMP2B-202ENST00000466696 OR6B3Q8NGW1 331 aa4.86□□□□□ -1.63
CHMP2B-202ENST00000466696 ZNF398Q8TD17 642 aa4.86□□□□□ -1.63
CHMP2B-202ENST00000466696 BPIFB1Q8TDL5 484 aa4.86□□□□□ -1.63
CHMP2B-202ENST00000466696 DIS3LQ8TF46 1054 aaKnown RBP4.86□□□□□ -1.63
CHMP2B-202ENST00000466696 PPP2R3CQ969Q6 453 aa4.86□□□□□ -1.63
CHMP2B-202ENST00000466696 C17orf80Q9BSJ5 609 aa4.86□□□□□ -1.63
CHMP2B-202ENST00000466696 EFHD1Q9BUP0 239 aa4.86□□□□□ -1.63
CHMP2B-202ENST00000466696 MS4A7Q9GZW8 240 aaPredicted RBP4.86□□□□□ -1.63
CHMP2B-202ENST00000466696 SLC12A5Q9H2X9 1139 aa4.86□□□□□ -1.63
CHMP2B-202ENST00000466696 PI4KBQ9UBF8 816 aa4.86□□□□□ -1.63
CHMP2B-202ENST00000466696 STAP2Q9UGK3 403 aa4.86□□□□□ -1.63
CHMP2B-202ENST00000466696 M0R3H8 397 aa4.85□□□□□ -1.63
CHMP2B-202ENST00000466696 BTN3A1O00481 513 aa4.85□□□□□ -1.63
CHMP2B-202ENST00000466696 CES2O00748 559 aa4.85□□□□□ -1.63
CHMP2B-202ENST00000466696 PMPCBO75439 489 aa4.85□□□□□ -1.63
CHMP2B-202ENST00000466696 RNF8O76064 485 aa4.85□□□□□ -1.63
CHMP2B-202ENST00000466696 CBSLP0DN79 551 aa4.85□□□□□ -1.63
CHMP2B-202ENST00000466696 TKTP29401 623 aaKnown RBP4.85□□□□□ -1.63
CHMP2B-202ENST00000466696 CBSP35520 551 aa4.85□□□□□ -1.63
CHMP2B-202ENST00000466696 CTBP1Q13363 440 aa4.85□□□□□ -1.63
CHMP2B-202ENST00000466696 CCNIQ14094 377 aa4.85□□□□□ -1.63
CHMP2B-202ENST00000466696 MLC1Q15049 377 aa4.85□□□□□ -1.63
CHMP2B-202ENST00000466696 DENND2CQ68D51 928 aa4.85□□□□□ -1.63
CHMP2B-202ENST00000466696 CRELD2Q6UXH1 353 aaPredicted RBP4.85□□□□□ -1.63
CHMP2B-202ENST00000466696 DAAM2Q86T65 1068 aa4.85□□□□□ -1.63
CHMP2B-202ENST00000466696 DENND1CQ8IV53 801 aa4.85□□□□□ -1.63
CHMP2B-202ENST00000466696 SAMD14Q8IZD0 417 aaPredicted RBP4.85□□□□□ -1.63
CHMP2B-202ENST00000466696 NRACQ8N912 160 aa4.85□□□□□ -1.63
CHMP2B-202ENST00000466696 TMEM171Q8WVE6 324 aa4.85□□□□□ -1.63
CHMP2B-202ENST00000466696 BRIP1Q9BX63 1249 aa4.85□□□□□ -1.63
CHMP2B-202ENST00000466696 EBF3Q9H4W6 596 aa4.85□□□□□ -1.63
CHMP2B-202ENST00000466696 ASIC5Q9NY37 505 aa4.85□□□□□ -1.63
CHMP2B-202ENST00000466696 FER1L4A9Z1Z3 1794 aa4.84□□□□□ -1.63
CHMP2B-202ENST00000466696 A0A1W2PPL8 197 aa4.84□□□□□ -1.63
CHMP2B-202ENST00000466696 H3BML4 177 aa4.84□□□□□ -1.63
CHMP2B-202ENST00000466696 H3BNC9 293 aa4.84□□□□□ -1.63
CHMP2B-202ENST00000466696 AP1G1O43747 822 aa4.84□□□□□ -1.63
CHMP2B-202ENST00000466696 MT-CO3P00414 261 aa4.84□□□□□ -1.63
CHMP2B-202ENST00000466696 NCLP19338 710 aaKnown RBP4.84□□□□□ -1.63
CHMP2B-202ENST00000466696 HTR1BP28222 390 aa4.84□□□□□ -1.63
CHMP2B-202ENST00000466696 PRKAR1BP31321 381 aa4.84□□□□□ -1.63
CHMP2B-202ENST00000466696 CCKBRP32239 447 aa4.84□□□□□ -1.63
CHMP2B-202ENST00000466696 ZNF267Q14586 743 aaPredicted RBP4.84□□□□□ -1.63
CHMP2B-202ENST00000466696 RBMS2Q15434 407 aaKnown RBP4.84□□□□□ -1.63
CHMP2B-202ENST00000466696 C10orf25Q5T742 122 aa4.84□□□□□ -1.63
CHMP2B-202ENST00000466696 PTCHD4Q6ZW05 846 aa4.84□□□□□ -1.63
CHMP2B-202ENST00000466696 IRF2BP2Q7Z5L9 587 aa4.84□□□□□ -1.63
CHMP2B-202ENST00000466696 ZDHHC17Q8IUH5 632 aa4.84□□□□□ -1.63
CHMP2B-202ENST00000466696 SPARTQ8N0X7 666 aa4.84□□□□□ -1.63
CHMP2B-202ENST00000466696 NSMCE1Q8WV22 266 aa4.84□□□□□ -1.63
CHMP2B-202ENST00000466696 HOOK2Q96ED9 719 aa4.84□□□□□ -1.63
CHMP2B-202ENST00000466696 DPH1Q9BZG8 443 aa4.84□□□□□ -1.63
CHMP2B-202ENST00000466696 GBA2Q9HCG7 927 aaPredicted RBP4.84□□□□□ -1.63
CHMP2B-202ENST00000466696 PAXBP1Q9Y5B6 917 aa4.84□□□□□ -1.63
CHMP2B-202ENST00000466696 TBC1D4O60343 1298 aa4.83□□□□□ -1.64
CHMP2B-202ENST00000466696 ABLIM3O94929 683 aa4.83□□□□□ -1.64
CHMP2B-202ENST00000466696 NPR1P16066 1061 aa4.83□□□□□ -1.64
CHMP2B-202ENST00000466696 HSPA6P17066 643 aa4.83□□□□□ -1.64
CHMP2B-202ENST00000466696 BCAT1P54687 386 aa4.83□□□□□ -1.64
CHMP2B-202ENST00000466696 HTRA4P83105 476 aaPredicted RBP4.83□□□□□ -1.64
CHMP2B-202ENST00000466696 PSG6Q00889 435 aa4.83□□□□□ -1.64
CHMP2B-202ENST00000466696 SLC13A2Q13183 592 aa4.83□□□□□ -1.64
CHMP2B-202ENST00000466696 RAB32Q13637 225 aa4.83□□□□□ -1.64
CHMP2B-202ENST00000466696 KLHL22Q53GT1 634 aa4.83□□□□□ -1.64
CHMP2B-202ENST00000466696 MPP5Q8N3R9 675 aa4.83□□□□□ -1.64
CHMP2B-202ENST00000466696 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.83□□□□□ -1.64
CHMP2B-202ENST00000466696 OSR1Q8TAX0 266 aaPredicted RBP4.83□□□□□ -1.64
CHMP2B-202ENST00000466696 RAPGEF4Q8WZA2 1011 aa4.83□□□□□ -1.64
CHMP2B-202ENST00000466696 BRINP2Q9C0B6 783 aa4.83□□□□□ -1.64
CHMP2B-202ENST00000466696 NMRK2Q9NPI5 230 aa4.83□□□□□ -1.64
CHMP2B-202ENST00000466696 SNX15Q9NRS6 342 aa4.83□□□□□ -1.64
CHMP2B-202ENST00000466696 MTMR4Q9NYA4 1195 aa4.83□□□□□ -1.64
CHMP2B-202ENST00000466696 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.83□□□□□ -1.64
CHMP2B-202ENST00000466696 PNMA8BQ9ULN7 279 aaPredicted RBP4.83□□□□□ -1.64
CHMP2B-202ENST00000466696 USP22Q9UPT9 525 aa4.83□□□□□ -1.64
CHMP2B-202ENST00000466696 DRG1Q9Y295 367 aaKnown RBP4.83□□□□□ -1.64
CHMP2B-202ENST00000466696 UBXN7O94888 489 aa4.82□□□□□ -1.64
CHMP2B-202ENST00000466696 PRF1P14222 555 aa4.82□□□□□ -1.64
CHMP2B-202ENST00000466696 SCP2P22307 547 aa4.82□□□□□ -1.64
CHMP2B-202ENST00000466696 EPHA3P29320 983 aa4.82□□□□□ -1.64
CHMP2B-202ENST00000466696 LMAN2Q12907 356 aa4.82□□□□□ -1.64
CHMP2B-202ENST00000466696 PNISRQ8TF01 805 aaKnown RBP4.82□□□□□ -1.64
CHMP2B-202ENST00000466696 WASF1Q92558 559 aa4.82□□□□□ -1.64
CHMP2B-202ENST00000466696 VCPIP1Q96JH7 1222 aa4.82□□□□□ -1.64
CHMP2B-202ENST00000466696 AIFM3Q96NN9 605 aa4.82□□□□□ -1.64
CHMP2B-202ENST00000466696 XPNPEP3Q9NQH7 507 aa4.82□□□□□ -1.64
CHMP2B-202ENST00000466696 GABBR1Q9UBS5 961 aa4.82□□□□□ -1.64
CHMP2B-202ENST00000466696 LY6G6EA0A0G2JKS1 128 aa4.81□□□□□ -1.64
CHMP2B-202ENST00000466696 FAM90A10PA6NDY2 464 aa4.81□□□□□ -1.64
CHMP2B-202ENST00000466696 ADAM10O14672 748 aa4.81□□□□□ -1.64
CHMP2B-202ENST00000466696 PHGDHO43175 533 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms