RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 CHRNB2P17787 502 aa16.88■□□□□ 0.29
GPC1-207ENST00000466624 FMO1Q01740 532 aa16.88■□□□□ 0.29
GPC1-207ENST00000466624 TAF12Q16514 161 aa16.88■□□□□ 0.29
GPC1-207ENST00000466624 PABPC1LQ4VXU2 614 aaKnown RBP16.88■□□□□ 0.29
GPC1-207ENST00000466624 CYP4A22Q5TCH4 519 aa16.88■□□□□ 0.29
GPC1-207ENST00000466624 TRIM72Q6ZMU5 477 aa16.88■□□□□ 0.29
GPC1-207ENST00000466624 GRASPQ7Z6J2 395 aaPredicted RBP16.88■□□□□ 0.29
GPC1-207ENST00000466624 SCML4Q8N228 414 aa16.88■□□□□ 0.29
GPC1-207ENST00000466624 TMEM35BQ8NCS4 154 aa16.88■□□□□ 0.29
GPC1-207ENST00000466624 GPR152Q8TDT2 470 aa16.88■□□□□ 0.29
GPC1-207ENST00000466624 SLC20A1Q8WUM9 679 aa16.88■□□□□ 0.29
GPC1-207ENST00000466624 OVCA2Q8WZ82 227 aa16.88■□□□□ 0.29
GPC1-207ENST00000466624 AGPAT1Q99943 283 aa16.88■□□□□ 0.29
GPC1-207ENST00000466624 CORO1BQ9BR76 489 aa16.88■□□□□ 0.29
GPC1-207ENST00000466624 APOL5Q9BWW9 433 aa16.88■□□□□ 0.29
GPC1-207ENST00000466624 PDCL3Q9H2J4 239 aa16.88■□□□□ 0.29
GPC1-207ENST00000466624 WDR6Q9NNW5 1121 aaKnown RBP16.88■□□□□ 0.29
GPC1-207ENST00000466624 ABHD10Q9NUJ1 306 aa16.88■□□□□ 0.29
GPC1-207ENST00000466624 IMPACTQ9P2X3 320 aa16.88■□□□□ 0.29
GPC1-207ENST00000466624 USP3Q9Y6I4 520 aa16.88■□□□□ 0.29
GPC1-207ENST00000466624 TULP2O00295 520 aa16.87■□□□□ 0.29
GPC1-207ENST00000466624 ZNF197O14709 1029 aa16.87■□□□□ 0.29
GPC1-207ENST00000466624 CYP1A1P04798 512 aaPredicted RBP16.87■□□□□ 0.29
GPC1-207ENST00000466624 SERPING1P05155 500 aa16.87■□□□□ 0.29
GPC1-207ENST00000466624 MMEP08473 750 aa16.87■□□□□ 0.29
GPC1-207ENST00000466624 YWHAQP27348 245 aa16.87■□□□□ 0.29
GPC1-207ENST00000466624 CDC25CP30307 473 aa16.87■□□□□ 0.29
GPC1-207ENST00000466624 ACADSBP45954 432 aa16.87■□□□□ 0.29
GPC1-207ENST00000466624 PPP3CCP48454 512 aa16.87■□□□□ 0.29
GPC1-207ENST00000466624 KIF11P52732 1056 aa16.87■□□□□ 0.29
GPC1-207ENST00000466624 KLHL30Q0D2K2 578 aa16.87■□□□□ 0.29
GPC1-207ENST00000466624 MTMR3Q13615 1198 aa16.87■□□□□ 0.29
GPC1-207ENST00000466624 GSE1Q14687 1217 aa16.87■□□□□ 0.29
GPC1-207ENST00000466624 TSR1Q2NL82 804 aaKnown RBP16.87■□□□□ 0.29
GPC1-207ENST00000466624 TAF3Q5VWG9 929 aa16.87■□□□□ 0.29
GPC1-207ENST00000466624 HGSNATQ68CP4 663 aa16.87■□□□□ 0.29
GPC1-207ENST00000466624 PMF1Q6P1K2 205 aa16.87■□□□□ 0.29
GPC1-207ENST00000466624 PDZD8Q8NEN9 1154 aa16.87■□□□□ 0.29
GPC1-207ENST00000466624 FEZF2Q8TBJ5 459 aa16.87■□□□□ 0.29
GPC1-207ENST00000466624 NOX5Q96PH1 765 aa16.87■□□□□ 0.29
GPC1-207ENST00000466624 SLC4A5Q9BY07 1137 aa16.87■□□□□ 0.29
GPC1-207ENST00000466624 HAUS4Q9H6D7 363 aa16.87■□□□□ 0.29
GPC1-207ENST00000466624 IL21Q9HBE4 155 aa16.87■□□□□ 0.29
GPC1-207ENST00000466624 ZNF334Q9HCZ1 680 aaPredicted RBP16.87■□□□□ 0.29
GPC1-207ENST00000466624 HCFC1R1Q9NWW0 138 aa16.87■□□□□ 0.29
GPC1-207ENST00000466624 THEGQ9P2T0 379 aa16.87■□□□□ 0.29
GPC1-207ENST00000466624 USP15Q9Y4E8 981 aaPredicted RBP16.87■□□□□ 0.29
GPC1-207ENST00000466624 NCANO14594 1321 aa16.87■□□□□ 0.29
GPC1-207ENST00000466624 CLUHO75153 1309 aa16.87■□□□□ 0.29
GPC1-207ENST00000466624 EYSQ5T1H1 3165 aa16.87■□□□□ 0.29
GPC1-207ENST00000466624 GRXCR2A6NFK2 248 aa16.86■□□□□ 0.29
GPC1-207ENST00000466624 SSTR3P32745 418 aaPredicted RBP16.86■□□□□ 0.29
GPC1-207ENST00000466624 SNX16P57768 344 aa16.86■□□□□ 0.29
GPC1-207ENST00000466624 USP46P62068 366 aa16.86■□□□□ 0.29
GPC1-207ENST00000466624 NOMO3P69849 1222 aa16.86■□□□□ 0.29
GPC1-207ENST00000466624 PDCLQ13371 301 aa16.86■□□□□ 0.29
GPC1-207ENST00000466624 CBX2Q14781 532 aaPredicted RBP16.86■□□□□ 0.29
GPC1-207ENST00000466624 CLUL1Q15846 466 aa16.86■□□□□ 0.29
GPC1-207ENST00000466624 AAK1Q2M2I8 961 aa16.86■□□□□ 0.29
GPC1-207ENST00000466624 PRSS36Q5K4E3 855 aa16.86■□□□□ 0.29
GPC1-207ENST00000466624 PPP1R2P3Q6NXS1 205 aa16.86■□□□□ 0.29
GPC1-207ENST00000466624 PDZD4Q76G19 769 aaPredicted RBP16.86■□□□□ 0.29
GPC1-207ENST00000466624 GPRIN1Q7Z2K8 1008 aa16.86■□□□□ 0.29
GPC1-207ENST00000466624 CCDC186Q7Z3E2 898 aa16.86■□□□□ 0.29
GPC1-207ENST00000466624 TMEM110Q86TL2 294 aa16.86■□□□□ 0.29
GPC1-207ENST00000466624 HS6ST3Q8IZP7 471 aa16.86■□□□□ 0.29
GPC1-207ENST00000466624 WDTC1Q8N5D0 677 aa16.86■□□□□ 0.29
GPC1-207ENST00000466624 STKLD1Q8NE28 680 aa16.86■□□□□ 0.29
GPC1-207ENST00000466624 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.86■□□□□ 0.29
GPC1-207ENST00000466624 SLITRK1Q96PX8 696 aa16.86■□□□□ 0.29
GPC1-207ENST00000466624 LRRC4Q9HBW1 653 aa16.86■□□□□ 0.29
GPC1-207ENST00000466624 CYTH4Q9UIA0 394 aa16.86■□□□□ 0.29
GPC1-207ENST00000466624 MAGED2Q9UNF1 606 aaPredicted RBP16.86■□□□□ 0.29
GPC1-207ENST00000466624 SCML2Q9UQR0 700 aa16.86■□□□□ 0.29
GPC1-207ENST00000466624 FAM50BQ9Y247 325 aa16.86■□□□□ 0.29
GPC1-207ENST00000466624 DOCK8Q8NF50 2099 aa16.85■□□□□ 0.29
GPC1-207ENST00000466624 NUP210Q8TEM1 1887 aaPredicted RBP16.85■□□□□ 0.29
GPC1-207ENST00000466624 SOBPA7XYQ1 873 aa16.85■□□□□ 0.29
GPC1-207ENST00000466624 F11P03951 625 aa16.85■□□□□ 0.29
GPC1-207ENST00000466624 UNGP13051 313 aaPredicted RBP16.85■□□□□ 0.29
GPC1-207ENST00000466624 TKTL1P51854 596 aa16.85■□□□□ 0.29
GPC1-207ENST00000466624 ADKP55263 362 aaKnown RBP16.85■□□□□ 0.29
GPC1-207ENST00000466624 CDK17Q00537 523 aa16.85■□□□□ 0.29
GPC1-207ENST00000466624 SMAD2Q15796 467 aaKnown RBP16.85■□□□□ 0.29
GPC1-207ENST00000466624 PM20D1Q6GTS8 502 aa16.85■□□□□ 0.29
GPC1-207ENST00000466624 WDR59Q6PJI9 974 aa16.85■□□□□ 0.29
GPC1-207ENST00000466624 GPIHBP1Q8IV16 184 aa16.85■□□□□ 0.29
GPC1-207ENST00000466624 PASD1Q8IV76 773 aa16.85■□□□□ 0.29
GPC1-207ENST00000466624 TC2NQ8N9U0 490 aa16.85■□□□□ 0.29
GPC1-207ENST00000466624 C1orf131Q8NDD1 294 aaKnown RBP16.85■□□□□ 0.29
GPC1-207ENST00000466624 SCAMP5Q8TAC9 235 aa16.85■□□□□ 0.29
GPC1-207ENST00000466624 OLIG1Q8TAK6 271 aa16.85■□□□□ 0.29
GPC1-207ENST00000466624 GCNAQ96QF7 691 aa16.85■□□□□ 0.29
GPC1-207ENST00000466624 CNGB3Q9NQW8 809 aa16.85■□□□□ 0.29
GPC1-207ENST00000466624 ZNHIT6Q9NWK9 470 aaKnown RBP16.85■□□□□ 0.29
GPC1-207ENST00000466624 ZMYM5Q9UJ78 669 aa16.85■□□□□ 0.29
GPC1-207ENST00000466624 SPTBN5Q9NRC6 3674 aaKnown RBP16.84■□□□□ 0.29
GPC1-207ENST00000466624 GOLGA6L6A8MZA4 724 aa16.84■□□□□ 0.29
GPC1-207ENST00000466624 FBXO21O94952 628 aa16.84■□□□□ 0.29
GPC1-207ENST00000466624 ZDHHC11BP0C7U3 371 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms