RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 CCINQ13939 588 aa14.03□□□□□ -0.16
C9orf3-210ENST00000462125 LRRC32Q14392 662 aa14.03□□□□□ -0.16
C9orf3-210ENST00000462125 MTF1Q14872 753 aa14.03□□□□□ -0.16
C9orf3-210ENST00000462125 TRIM68Q6AZZ1 485 aa14.03□□□□□ -0.16
C9orf3-210ENST00000462125 SCARA5Q6ZMJ2 495 aa14.03□□□□□ -0.16
C9orf3-210ENST00000462125 FAM35AQ86V20 835 aa14.03□□□□□ -0.16
C9orf3-210ENST00000462125 SPEM1Q8N4L4 309 aa14.03□□□□□ -0.16
C9orf3-210ENST00000462125 ZMIZ2Q8NF64 920 aa14.03□□□□□ -0.16
C9orf3-210ENST00000462125 OSCP1Q8WVF1 389 aa14.03□□□□□ -0.16
C9orf3-210ENST00000462125 OVCA2Q8WZ82 227 aa14.03□□□□□ -0.16
C9orf3-210ENST00000462125 ERCC4Q92889 916 aaPredicted RBP14.03□□□□□ -0.16
C9orf3-210ENST00000462125 SMARCD1Q96GM5 515 aa14.03□□□□□ -0.16
C9orf3-210ENST00000462125 GBP4Q96PP9 640 aa14.03□□□□□ -0.16
C9orf3-210ENST00000462125 SLITRK1Q96PX8 696 aa14.03□□□□□ -0.16
C9orf3-210ENST00000462125 IMPG2Q9BZV3 1241 aa14.03□□□□□ -0.16
C9orf3-210ENST00000462125 ZSCAN32Q9NX65 697 aa14.03□□□□□ -0.16
C9orf3-210ENST00000462125 PCDHGA2Q9Y5H1 932 aa14.03□□□□□ -0.16
C9orf3-210ENST00000462125 ATP8B3O60423 1300 aa14.03□□□□□ -0.16
C9orf3-210ENST00000462125 PTPRDP23468 1912 aa14.03□□□□□ -0.16
C9orf3-210ENST00000462125 OBSL1O75147 1896 aa14.02□□□□□ -0.16
C9orf3-210ENST00000462125 STX10O60499 249 aa14.02□□□□□ -0.17
C9orf3-210ENST00000462125 OAS1P00973 400 aaKnown RBP14.02□□□□□ -0.17
C9orf3-210ENST00000462125 LMNAP02545 664 aaKnown RBP14.02□□□□□ -0.17
C9orf3-210ENST00000462125 ZDHHC11BP0C7U3 371 aa14.02□□□□□ -0.17
C9orf3-210ENST00000462125 EPB41P11171 864 aaKnown RBP14.02□□□□□ -0.17
C9orf3-210ENST00000462125 ARSAP15289 507 aa14.02□□□□□ -0.17
C9orf3-210ENST00000462125 YWHAQP27348 245 aa14.02□□□□□ -0.17
C9orf3-210ENST00000462125 CXCL12P48061 93 aa14.02□□□□□ -0.17
C9orf3-210ENST00000462125 CCR3P51677 355 aa14.02□□□□□ -0.17
C9orf3-210ENST00000462125 LRRC63Q05C16 580 aa14.02□□□□□ -0.17
C9orf3-210ENST00000462125 PON2Q15165 354 aa14.02□□□□□ -0.17
C9orf3-210ENST00000462125 TMEM196Q5HYL7 178 aa14.02□□□□□ -0.17
C9orf3-210ENST00000462125 C12orf29Q8N999 325 aa14.02□□□□□ -0.17
C9orf3-210ENST00000462125 PDZD8Q8NEN9 1154 aa14.02□□□□□ -0.17
C9orf3-210ENST00000462125 SH3RF2Q8TEC5 729 aa14.02□□□□□ -0.17
C9orf3-210ENST00000462125 WHAMMQ8TF30 809 aa14.02□□□□□ -0.17
C9orf3-210ENST00000462125 SEMA4DQ92854 862 aa14.02□□□□□ -0.17
C9orf3-210ENST00000462125 TWNKQ96RR1 684 aa14.02□□□□□ -0.17
C9orf3-210ENST00000462125 HNRNPABQ99729 332 aaKnown RBP14.02□□□□□ -0.17
C9orf3-210ENST00000462125 SMOQ99835 787 aa14.02□□□□□ -0.17
C9orf3-210ENST00000462125 MED10Q9BTT4 135 aa14.02□□□□□ -0.17
C9orf3-210ENST00000462125 FAM124BQ9H5Z6 455 aaPredicted RBP14.02□□□□□ -0.17
C9orf3-210ENST00000462125 ECT2Q9H8V3 914 aa14.02□□□□□ -0.17
C9orf3-210ENST00000462125 DMAP1Q9NPF5 467 aaPredicted RBP14.02□□□□□ -0.17
C9orf3-210ENST00000462125 RBM12Q9NTZ6 932 aaKnown RBP14.02□□□□□ -0.17
C9orf3-210ENST00000462125 RAB20Q9NX57 234 aa14.02□□□□□ -0.17
C9orf3-210ENST00000462125 DUS2Q9NX74 493 aaKnown RBP14.02□□□□□ -0.17
C9orf3-210ENST00000462125 HMGXB4Q9UGU5 601 aa14.02□□□□□ -0.17
C9orf3-210ENST00000462125 COQ4Q9Y3A0 265 aa14.02□□□□□ -0.17
C9orf3-210ENST00000462125 PTPRZ1P23471 2315 aaPredicted RBP14.02□□□□□ -0.17
C9orf3-210ENST00000462125 SLC16A3O15427 465 aaKnown RBP14.01□□□□□ -0.17
C9orf3-210ENST00000462125 AP1G2O75843 785 aa14.01□□□□□ -0.17
C9orf3-210ENST00000462125 BEST1O76090 585 aa14.01□□□□□ -0.17
C9orf3-210ENST00000462125 PAPSS2O95340 614 aaPredicted RBP14.01□□□□□ -0.17
C9orf3-210ENST00000462125 GJA4P35212 333 aa14.01□□□□□ -0.17
C9orf3-210ENST00000462125 PPP1R2P41236 205 aa14.01□□□□□ -0.17
C9orf3-210ENST00000462125 GALK1P51570 392 aa14.01□□□□□ -0.17
C9orf3-210ENST00000462125 NRLP54845 237 aa14.01□□□□□ -0.17
C9orf3-210ENST00000462125 PPP2R5DQ14738 602 aa14.01□□□□□ -0.17
C9orf3-210ENST00000462125 EML3Q32P44 896 aa14.01□□□□□ -0.17
C9orf3-210ENST00000462125 TSSK4Q6SA08 328 aa14.01□□□□□ -0.17
C9orf3-210ENST00000462125 SUMF1Q8NBK3 374 aa14.01□□□□□ -0.17
C9orf3-210ENST00000462125 CCDC150Q8NCX0 1101 aa14.01□□□□□ -0.17
C9orf3-210ENST00000462125 FBXL13Q8NEE6 735 aa14.01□□□□□ -0.17
C9orf3-210ENST00000462125 SCAMP5Q8TAC9 235 aa14.01□□□□□ -0.17
C9orf3-210ENST00000462125 SLC2A14Q8TDB8 520 aa14.01□□□□□ -0.17
C9orf3-210ENST00000462125 CYFIP2Q96F07 1278 aa14.01□□□□□ -0.17
C9orf3-210ENST00000462125 DHTKD1Q96HY7 919 aaPredicted RBP14.01□□□□□ -0.17
C9orf3-210ENST00000462125 TSG101Q99816 390 aa14.01□□□□□ -0.17
C9orf3-210ENST00000462125 NT5C1AQ9BXI3 368 aa14.01□□□□□ -0.17
C9orf3-210ENST00000462125 NIF3L1Q9GZT8 377 aa14.01□□□□□ -0.17
C9orf3-210ENST00000462125 LINC00597Q9H2U6 94 aa14.01□□□□□ -0.17
C9orf3-210ENST00000462125 CHORDC1Q9UHD1 332 aaPredicted RBP14.01□□□□□ -0.17
C9orf3-210ENST00000462125 MAN1B1Q9UKM7 699 aa14.01□□□□□ -0.17
C9orf3-210ENST00000462125 ANAPC1Q9H1A4 1944 aa14.01□□□□□ -0.17
C9orf3-210ENST00000462125 KIF26AQ9ULI4 1882 aaPredicted RBP14.01□□□□□ -0.17
C9orf3-210ENST00000462125 RIF1Q5UIP0 2472 aaKnown RBP14□□□□□ -0.17
C9orf3-210ENST00000462125 PATJQ8NI35 1801 aa14□□□□□ -0.17
C9orf3-210ENST00000462125 LEFTY2O00292 366 aa14□□□□□ -0.17
C9orf3-210ENST00000462125 KINO60870 393 aaKnown RBP14□□□□□ -0.17
C9orf3-210ENST00000462125 GADD45BO75293 160 aaPredicted RBP14□□□□□ -0.17
C9orf3-210ENST00000462125 CILPO75339 1184 aa14□□□□□ -0.17
C9orf3-210ENST00000462125 CLSTN1O94985 981 aa14□□□□□ -0.17
C9orf3-210ENST00000462125 CCDC130P13994 396 aa14□□□□□ -0.17
C9orf3-210ENST00000462125 BMP6P22004 513 aa14□□□□□ -0.17
C9orf3-210ENST00000462125 MXI1P50539 228 aa14□□□□□ -0.17
C9orf3-210ENST00000462125 SLC5A3P53794 718 aa14□□□□□ -0.17
C9orf3-210ENST00000462125 ORC1Q13415 861 aa14□□□□□ -0.17
C9orf3-210ENST00000462125 FSTL4Q6MZW2 842 aa14□□□□□ -0.17
C9orf3-210ENST00000462125 FOXR2Q6PJQ5 311 aa14□□□□□ -0.17
C9orf3-210ENST00000462125 ADGRG2Q8IZP9 1017 aa14□□□□□ -0.17
C9orf3-210ENST00000462125 CPA6Q8N4T0 437 aa14□□□□□ -0.17
C9orf3-210ENST00000462125 TTC39CQ8N584 583 aa14□□□□□ -0.17
C9orf3-210ENST00000462125 ATRIPQ8WXE1 791 aa14□□□□□ -0.17
C9orf3-210ENST00000462125 ATP2A3Q93084 1043 aa14□□□□□ -0.17
C9orf3-210ENST00000462125 MMRN2Q9H8L6 949 aa14□□□□□ -0.17
C9orf3-210ENST00000462125 FBRSL1Q9HCM7 1045 aaKnown RBP14□□□□□ -0.17
C9orf3-210ENST00000462125 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14□□□□□ -0.175e-17■■■■■ 409.9
C9orf3-210ENST00000462125 KRT82Q9NSB4 513 aa14□□□□□ -0.17
C9orf3-210ENST00000462125 WNT6Q9Y6F9 365 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms